From 7e55aa2d73738176a81b0927952d90e286479ad0 Mon Sep 17 00:00:00 2001 From: Sigve Nakken Date: Tue, 27 Sep 2022 22:07:39 +0200 Subject: [PATCH] =?UTF-8?q?Bump=20version:=201.3.1=20=E2=86=92=201.3.2?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .bumpversion.cfg | 2 +- .github/workflows/pkgdown.yaml | 2 +- DESCRIPTION | 2 +- README.md | 2 +- pkgdown/index.md | 2 +- vignettes/installation.Rmd | 2 +- 6 files changed, 6 insertions(+), 6 deletions(-) diff --git a/.bumpversion.cfg b/.bumpversion.cfg index d08ae00..e6be1dc 100755 --- a/.bumpversion.cfg +++ b/.bumpversion.cfg @@ -1,5 +1,5 @@ [bumpversion] -current_version = 1.3.1 +current_version = 1.3.2 commit = True tag = False diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml index e4d2c8d..909d68e 100644 --- a/.github/workflows/pkgdown.yaml +++ b/.github/workflows/pkgdown.yaml @@ -8,7 +8,7 @@ on: workflow_dispatch: env: - VERSION: '1.3.1' #versioned by bump2version + VERSION: '1.3.2' #versioned by bump2version name: pkgdown diff --git a/DESCRIPTION b/DESCRIPTION index 5820f5d..da57ef0 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Package: oncoEnrichR Type: Package Title: Cancer-dedicated gene set interpretation -Version: 1.3.1 +Version: 1.3.2 Date: 2022-09-27 Authors@R: person(given = "Sigve", family = "Nakken", role = c("aut", "cre"), email = "sigven@ifi.uio.no", diff --git a/README.md b/README.md index 652b2db..65858f7 100644 --- a/README.md +++ b/README.md @@ -2,7 +2,7 @@ **oncoEnrichR** is an R package for functional interrogation of human gene lists in the context of cancer. The package leverages an extensive amount of prior molecular knowledge that allows for biological interpretation along multiple dimensions, both at the systems level and at the level of individual genes. -Web-based access to **oncoEnrichR** is available at [**https://oncotools.elixir.no**](https://oncotools.elixir.no/tool_runner?tool_id=galaxy-ntnu.bioinfo.no%2Ftoolshed_nels%2Frepos%2Fradmilko%2Foncoenrichr%2Foncoenrichr_wrapper%2F1.3.1) +Web-based access to **oncoEnrichR** is available at [**https://oncotools.elixir.no**](https://oncotools.elixir.no/tool_runner?tool_id=galaxy-ntnu.bioinfo.no%2Ftoolshed_nels%2Frepos%2Fradmilko%2Foncoenrichr%2Foncoenrichr_wrapper%2F1.3.2) **oncoEnrichR** is primarily intended for exploratory analysis and prioritization of a gene list (referred to here as **query set**) from high-throughput cancer biology experiments, e.g. CRISPR screens, protein proximity labeling, or gene expression profiling. The tool queries a number of high-quality data resources in order to assemble cancer-relevant annotations and analyses in an interactive report. diff --git a/pkgdown/index.md b/pkgdown/index.md index 108b14d..2c70224 100644 --- a/pkgdown/index.md +++ b/pkgdown/index.md @@ -21,7 +21,7 @@ data resources in order to assemble useful gene annotations and analyses in an interactive report (examples from the report shown below). Web-based access to **oncoEnrichR** is available at -[**https://oncotools.elixir.no**](https://oncotools.elixir.no/tool_runner?tool_id=galaxy-ntnu.bioinfo.no%2Ftoolshed_nels%2Frepos%2Fradmilko%2Foncoenrichr%2Foncoenrichr_wrapper%2F1.3.1) +[**https://oncotools.elixir.no**](https://oncotools.elixir.no/tool_runner?tool_id=galaxy-ntnu.bioinfo.no%2Ftoolshed_nels%2Frepos%2Fradmilko%2Foncoenrichr%2Foncoenrichr_wrapper%2F1.3.2)
diff --git a/vignettes/installation.Rmd b/vignettes/installation.Rmd index f779f18..6574fac 100644 --- a/vignettes/installation.Rmd +++ b/vignettes/installation.Rmd @@ -8,7 +8,7 @@ vignette: > --- 1. `install.packages('devtools')` -2. `devtools::install_github('sigven/oncoEnrichR', ref = "v1.3.1")` +2. `devtools::install_github('sigven/oncoEnrichR', ref = "v1.3.2")` 3. `library(oncoEnrichR)`