diff --git a/notebooks/aurora/04_CAS04.ipynb b/notebooks/aurora/04_CAS04.ipynb deleted file mode 100644 index ad0be96..0000000 --- a/notebooks/aurora/04_CAS04.ipynb +++ /dev/null @@ -1,3616 +0,0 @@ -{ - "cells": [ - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "## Process CAS04 Data with Aurora" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "CAS04 was a trial station selected because it was first in alphabetical order from a collection of \"recent\" stations. This station was used as a proof of concept to show that aurora could reproduce EMTF results for USArray data." - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "The steps are similar to the synthetic data workbook, but in this case we have a larger data set with more interesting things happening.\n", - "\n", - "The data are already created and available on the IRIS ftp website:\n", - "\n", - "http://ftp.iris.washington.edu/pub/dropoff/buffer/MT_test_data/\n", - "\n", - "but they can also be generated using aurora/tests/CAS04/01_make_cas04_mth5.py\n", - "\n", - "This notebook starts from an existing h5 file.\n", - "\n", - "1. Create the synthetic mth5 [IGNORE]\n", - "2. Get a Run Summary from the mth5\n", - "3. Select the station to process and optionally the remote reference station\n", - "4. Create a processing config\n", - "5. Generate TFs\n", - "6. Archive the TFs (in emtf_xml or z-file)" - ] - }, - { - "cell_type": "code", - "execution_count": 1, - "metadata": {}, - "outputs": [], - "source": [ - "# Uncomment the following line to make plots interactive.\n", - "# %matplotlib widget" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "### Here are the modules we will need to import " - ] - }, - { - "cell_type": "code", - "execution_count": 2, - "metadata": {}, - "outputs": [ - { - "name": "stderr", - "output_type": "stream", - "text": [ - "2022-10-15 18:22:25,980 [line 135] mth5.setup_logger - INFO: Logging file can be found /home/kkappler/software/irismt/mth5/logs/mth5_debug.log\n" - ] - } - ], - "source": [ - "import pathlib\n", - "import warnings\n", - "\n", - "import pandas as pd\n", - "\n", - "from aurora.config.config_creator import ConfigCreator\n", - "from aurora.pipelines.process_mth5 import process_mth5\n", - "from aurora.pipelines.run_summary import RunSummary\n", - "from aurora.test_utils.synthetic.make_mth5_from_asc import create_test12rr_h5\n", - "from aurora.test_utils.synthetic.paths import DATA_PATH\n", - "from aurora.transfer_function.kernel_dataset import KernelDataset\n", - "from mth5.utils.helpers import initialize_mth5\n", - "warnings.filterwarnings('ignore')" - ] - }, - { - "cell_type": "markdown", - "metadata": { - "tags": [] - }, - "source": [ - "## Define mth5 file" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "The file should probably be placed into a dedicated data directory but for this test the data are put here, in the same directory as this notebook." - ] - }, - { - "cell_type": "code", - "execution_count": 3, - "metadata": {}, - "outputs": [], - "source": [ - "mth5_path = pathlib.Path(\"8P_CAS04_CAV07_NVR11_REV06.h5\")" - ] - }, - { - "cell_type": "code", - "execution_count": 4, - "metadata": {}, - "outputs": [], - "source": [ - "m = initialize_mth5(mth5_path)" - ] - }, - { - "cell_type": "code", - "execution_count": 5, - "metadata": {}, - "outputs": [ - { - "data": { - "text/html": [ - "
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34 | \n", - "CONUS South | \n", - "CAV07 | \n", - "c | \n", - "35.586754 | \n", - "-118.797662 | \n", - "874.20000 | \n", - "hz | \n", - "2020-06-10 03:50:04+00:00 | \n", - "2020-06-23 17:35:37+00:00 | \n", - "1172734 | \n", - "1.0 | \n", - "magnetic | \n", - "0.0 | \n", - "90.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
35 | \n", - "CONUS South | \n", - "CAV07 | \n", - "d | \n", - "35.586754 | \n", - "-118.797662 | \n", - "874.20000 | \n", - "ex | \n", - "2020-06-23 18:38:51+00:00 | \n", - "2020-07-06 16:31:12+00:00 | \n", - "1115542 | \n", - "1.0 | \n", - "electric | \n", - "12.3 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
36 | \n", - "CONUS South | \n", - "CAV07 | \n", - "d | \n", - "35.586754 | \n", - "-118.797662 | \n", - "874.20000 | \n", - "ey | \n", - "2020-06-23 18:38:51+00:00 | \n", - "2020-07-06 16:31:12+00:00 | \n", - "1115542 | \n", - "1.0 | \n", - "electric | \n", - "102.3 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
37 | \n", - "CONUS South | \n", - "CAV07 | \n", - "d | \n", - "35.586754 | \n", - "-118.797662 | \n", - "874.20000 | \n", - "hx | \n", - "2020-06-23 18:38:51+00:00 | \n", - "2020-07-06 16:31:12+00:00 | \n", - "1115542 | \n", - "1.0 | \n", - "magnetic | \n", - "12.3 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
38 | \n", - "CONUS South | \n", - "CAV07 | \n", - "d | \n", - "35.586754 | \n", - "-118.797662 | \n", - "874.20000 | \n", - "hy | \n", - "2020-06-23 18:38:51+00:00 | \n", - "2020-07-06 16:31:12+00:00 | \n", - "1115542 | \n", - "1.0 | \n", - "magnetic | \n", - "102.3 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
39 | \n", - "CONUS South | \n", - "CAV07 | \n", - "d | \n", - "35.586754 | \n", - "-118.797662 | \n", - "874.20000 | \n", - "hz | \n", - "2020-06-23 18:38:51+00:00 | \n", - "2020-07-06 16:31:12+00:00 | \n", - "1115542 | \n", - "1.0 | \n", - "magnetic | \n", - "0.0 | \n", - "90.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
40 | \n", - "CONUS South | \n", - "NVR11 | \n", - "none | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "ex | \n", - "2020-06-12 21:10:38+00:00 | \n", - "2020-06-12 21:59:40+00:00 | \n", - "2943 | \n", - "1.0 | \n", - "electric | \n", - "0.0 | \n", - "0.0 | \n", - "counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
41 | \n", - "CONUS South | \n", - "NVR11 | \n", - "none | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "ey | \n", - "2020-06-12 21:10:38+00:00 | \n", - "2020-06-12 21:59:40+00:00 | \n", - "2943 | \n", - "1.0 | \n", - "electric | \n", - "0.0 | \n", - "0.0 | \n", - "counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
42 | \n", - "CONUS South | \n", - "NVR11 | \n", - "none | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hx | \n", - "2020-06-12 21:10:38+00:00 | \n", - "2020-06-12 21:59:40+00:00 | \n", - "2943 | \n", - "1.0 | \n", - "magnetic | \n", - "0.0 | \n", - "0.0 | \n", - "counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
43 | \n", - "CONUS South | \n", - "NVR11 | \n", - "none | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hy | \n", - "2020-06-12 21:10:38+00:00 | \n", - "2020-06-12 21:59:40+00:00 | \n", - "2943 | \n", - "1.0 | \n", - "magnetic | \n", - "0.0 | \n", - "0.0 | \n", - "counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
44 | \n", - "CONUS South | \n", - "NVR11 | \n", - "none | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hz | \n", - "2020-06-12 21:10:38+00:00 | \n", - "2020-06-12 21:59:40+00:00 | \n", - "2943 | \n", - "1.0 | \n", - "magnetic | \n", - "0.0 | \n", - "0.0 | \n", - "counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
45 | \n", - "CONUS South | \n", - "NVR11 | \n", - "a | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "ex | \n", - "2020-06-12 22:13:24+00:00 | \n", - "2020-06-26 19:35:21+00:00 | \n", - "1200118 | \n", - "1.0 | \n", - "electric | \n", - "12.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
46 | \n", - "CONUS South | \n", - "NVR11 | \n", - "a | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "ey | \n", - "2020-06-12 22:13:24+00:00 | \n", - "2020-06-26 19:35:21+00:00 | \n", - "1200118 | \n", - "1.0 | \n", - "electric | \n", - "102.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
47 | \n", - "CONUS South | \n", - "NVR11 | \n", - "a | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hx | \n", - "2020-06-12 22:13:24+00:00 | \n", - "2020-06-26 19:35:21+00:00 | \n", - "1200118 | \n", - "1.0 | \n", - "magnetic | \n", - "12.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
48 | \n", - "CONUS South | \n", - "NVR11 | \n", - "a | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hy | \n", - "2020-06-12 22:13:24+00:00 | \n", - "2020-06-26 19:35:21+00:00 | \n", - "1200118 | \n", - "1.0 | \n", - "magnetic | \n", - "102.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
49 | \n", - "CONUS South | \n", - "NVR11 | \n", - "a | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hz | \n", - "2020-06-12 22:13:24+00:00 | \n", - "2020-06-26 19:35:21+00:00 | \n", - "1200118 | \n", - "1.0 | \n", - "magnetic | \n", - "0.0 | \n", - "90.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
50 | \n", - "CONUS South | \n", - "NVR11 | \n", - "b | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "ex | \n", - "2020-06-26 22:04:35+00:00 | \n", - "2020-06-27 17:16:51+00:00 | \n", - "69137 | \n", - "1.0 | \n", - "electric | \n", - "12.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
51 | \n", - "CONUS South | \n", - "NVR11 | \n", - "b | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "ey | \n", - "2020-06-26 22:04:35+00:00 | \n", - "2020-06-27 17:16:51+00:00 | \n", - "69137 | \n", - "1.0 | \n", - "electric | \n", - "102.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
52 | \n", - "CONUS South | \n", - "NVR11 | \n", - "b | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hx | \n", - "2020-06-26 22:04:35+00:00 | \n", - "2020-06-27 17:16:51+00:00 | \n", - "69137 | \n", - "1.0 | \n", - "magnetic | \n", - "12.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
53 | \n", - "CONUS South | \n", - "NVR11 | \n", - "b | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hy | \n", - "2020-06-26 22:04:35+00:00 | \n", - "2020-06-27 17:16:51+00:00 | \n", - "69137 | \n", - "1.0 | \n", - "magnetic | \n", - "102.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
54 | \n", - "CONUS South | \n", - "NVR11 | \n", - "b | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hz | \n", - "2020-06-26 22:04:35+00:00 | \n", - "2020-06-27 17:16:51+00:00 | \n", - "69137 | \n", - "1.0 | \n", - "magnetic | \n", - "0.0 | \n", - "90.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
55 | \n", - "CONUS South | \n", - "NVR11 | \n", - "c | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "ex | \n", - "2020-06-27 18:32:12+00:00 | \n", - "2020-07-10 18:17:08+00:00 | \n", - "1122297 | \n", - "1.0 | \n", - "electric | \n", - "12.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
56 | \n", - "CONUS South | \n", - "NVR11 | \n", - "c | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "ey | \n", - "2020-06-27 18:32:12+00:00 | \n", - "2020-07-10 18:17:08+00:00 | \n", - "1122297 | \n", - "1.0 | \n", - "electric | \n", - "102.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
57 | \n", - "CONUS South | \n", - "NVR11 | \n", - "c | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hx | \n", - "2020-06-27 18:32:12+00:00 | \n", - "2020-07-10 18:17:08+00:00 | \n", - "1122297 | \n", - "1.0 | \n", - "magnetic | \n", - "12.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
58 | \n", - "CONUS South | \n", - "NVR11 | \n", - "c | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hy | \n", - "2020-06-27 18:32:12+00:00 | \n", - "2020-07-10 18:17:08+00:00 | \n", - "1122297 | \n", - "1.0 | \n", - "magnetic | \n", - "102.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
59 | \n", - "CONUS South | \n", - "NVR11 | \n", - "c | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hz | \n", - "2020-06-27 18:32:12+00:00 | \n", - "2020-07-10 18:17:08+00:00 | \n", - "1122297 | \n", - "1.0 | \n", - "magnetic | \n", - "0.0 | \n", - "90.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
60 | \n", - "CONUS South | \n", - "NVR11 | \n", - "d | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "ex | \n", - "2020-07-10 19:18:48+00:00 | \n", - "2020-07-23 21:19:08+00:00 | \n", - "1130421 | \n", - "1.0 | \n", - "electric | \n", - "12.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
61 | \n", - "CONUS South | \n", - "NVR11 | \n", - "d | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "ey | \n", - "2020-07-10 19:18:48+00:00 | \n", - "2020-07-23 21:19:08+00:00 | \n", - "1130421 | \n", - "1.0 | \n", - "electric | \n", - "102.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
62 | \n", - "CONUS South | \n", - "NVR11 | \n", - "d | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hx | \n", - "2020-07-10 19:18:48+00:00 | \n", - "2020-07-23 21:19:08+00:00 | \n", - "1130421 | \n", - "1.0 | \n", - "magnetic | \n", - "12.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
63 | \n", - "CONUS South | \n", - "NVR11 | \n", - "d | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hy | \n", - "2020-07-10 19:18:48+00:00 | \n", - "2020-07-23 21:19:08+00:00 | \n", - "1130421 | \n", - "1.0 | \n", - "magnetic | \n", - "102.0 | \n", - "0.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
64 | \n", - "CONUS South | \n", - "NVR11 | \n", - "d | \n", - "38.281043 | \n", - "-115.668395 | \n", - "1561.86875 | \n", - "hz | \n", - "2020-07-10 19:18:48+00:00 | \n", - "2020-07-23 21:19:08+00:00 | \n", - "1130421 | \n", - "1.0 | \n", - "magnetic | \n", - "0.0 | \n", - "90.0 | \n", - "digital counts | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "<HDF5 object reference> | \n", - "
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