From fca2e46340cdabc460947c9e9cbc2c08c1546452 Mon Sep 17 00:00:00 2001
From: Ori <ofox@stsci.edu>
Date: Wed, 15 Sep 2021 16:40:15 -0400
Subject: [PATCH] more small style edits

---
 .../NGC4151_FeII_ContinuumFit.ipynb           | 31 +++++++++----------
 1 file changed, 14 insertions(+), 17 deletions(-)

diff --git a/jdat_notebooks/IFU_cube_continuum_fit/NGC4151_FeII_ContinuumFit.ipynb b/jdat_notebooks/IFU_cube_continuum_fit/NGC4151_FeII_ContinuumFit.ipynb
index f3c76034..d632acb0 100644
--- a/jdat_notebooks/IFU_cube_continuum_fit/NGC4151_FeII_ContinuumFit.ipynb
+++ b/jdat_notebooks/IFU_cube_continuum_fit/NGC4151_FeII_ContinuumFit.ipynb
@@ -398,7 +398,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "#Apply the spectral region (This code creates new collapsed spectra if you did not create any yourself within jdaviz)\n",
+    "# Apply the spectral region (This code creates new collapsed spectra if you did not create any yourself within jdaviz)\n",
     "from specutils.manipulation import extract_region\n",
     "\n",
     "if not spectrum1:\n",
@@ -535,8 +535,7 @@
    "outputs": [],
    "source": [
     "# Extract Continuum Model from Cubeviz above\n",
-    "cont_psf_cube = cubeviz.app.get_data_from_viewer(\"uncert-viewer\", \"LinFitCont [Cube] 1\")\n",
-    "# cont_psf_cubee = cubeviz.app.get_data_from_viewer(\"uncert-viewer\", \"LinFitCont [Cube] 2\")"
+    "cont_psf_cube = cubeviz.app.get_data_from_viewer(\"uncert-viewer\", \"LinFitCont [Cube] 1\")"
    ]
   },
   {
@@ -624,11 +623,10 @@
    ]
   },
   {
-   "cell_type": "markdown",
+   "cell_type": "raw",
    "metadata": {},
    "source": [
-    "And this is just an example of how you can acces the model fit parameter values:\n",
-    "\n",
+    "# And this is just an example of how you can acces the model fit parameter values:\n",
     "params['LinFitCont_3d']['slope']"
    ]
   },
@@ -774,19 +772,19 @@
    ]
   },
   {
-   "cell_type": "markdown",
+   "cell_type": "raw",
    "metadata": {},
    "source": [
-    "Developer Note: Saving with 'Count' doesn't work.\n",
+    "# Developer Note: Saving with 'Count' doesn't work.\n",
     "\n",
-    "print(all_spec.flux)<br />\n",
-    "os.remove(\"all_spec.fits\")<br />\n",
-    "specref=Spectrum1D(flux=all_spec.flux*u.Unit('Jy'), spectral_axis=all_spec.spectral_axis)<br />\n",
-    "specref.write(\"all_spec.fits\")<br />\n",
+    "print(all_spec.flux)\n",
+    "os.remove(\"all_spec.fits\")\n",
+    "specref=Spectrum1D(flux=all_spec.flux*u.Unit('Jy'), spectral_axis=all_spec.spectral_axis)\n",
+    "specref.write(\"all_spec.fits\")\n",
     "\n",
-    "os.remove(\"gauss_spec.fits\")<br />\n",
-    "specref=Spectrum1D(flux=gauss_spec.flux*u.Unit('Jy'), spectral_axis=gauss_spec.spectral_axis)<br />\n",
-    "specref.write(\"gauss_spec.fits\")<br />\n"
+    "os.remove(\"gauss_spec.fits\")\n",
+    "specref=Spectrum1D(flux=gauss_spec.flux*u.Unit('Jy'), spectral_axis=gauss_spec.spectral_axis)\n",
+    "specref.write(\"gauss_spec.fits\")"
    ]
   },
   {
@@ -924,7 +922,6 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "# del newfull_header['MODE']\n",
     "del newfinalsub_header['MODE']\n",
     "\n",
     "fits.writeto('NGC4151_Hband_ContinuumandBrackettModel.fits', full_model, newfull_header, overwrite=True)\n",
@@ -956,7 +953,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "#Open up a new instance of Cubeviz to visualize continuum subtracted data\n",
+    "# Open up a new instance of Cubeviz to visualize continuum subtracted data\n",
     "from jdaviz import CubeViz\n",
     "cubeviz3 = CubeViz()\n",
     "cubeviz3.app"