diff --git a/README.md b/README.md index 6a24f278..ca68b7ef 100644 --- a/README.md +++ b/README.md @@ -263,14 +263,15 @@ The default output fields are: `query,target,fident,alnlen,mismatch,gapopen,qsta `easy-complexsearch` also generates a report (prefixed `_report`), which provides a summary of the inter-complex chain matching, including identifiers, chains, TMscores, rotation matrices, translation vectors, and assignment IDs. The report includes the following fields: | Column | Description | | --- | --- | -| 1 | Identifiers for query complex | -| 2 | Identifiers for query complex | -| 3 | Matched chains of query complex | -| 4 | Matched chains of target complex | -| 5 | TM scores normalized by query length | -| 6 | TM scores normalized by target length | -| (8,9) | Rotation matrix (u) and Translation vector(t) | -| 9 | Complex Assignment Id | +| 1 | Identifier of the query complex | +| 2 | Identifier of the target complex | +| 3 | Comma separated matched chains in the query complex | +| 4 | Comma separated matched chains in the target complex | +| 5 | TM score normalized by query length [0-1] | +| 6 | TM score normalized by target length [0-1] | +| 7 | Comma separated nine rotation matrix (U) values | +| 8 | Comma separated three translation vector (T) values | +| 9 | Complex alignment ID | **Example Output:** ```