From 9cba9bd3d6433055e03bd457257930e6084b155a Mon Sep 17 00:00:00 2001 From: Neil Shephard Date: Wed, 27 Nov 2024 11:50:56 +0000 Subject: [PATCH] ci: install cgat from GitHub v0.7.4 --- .github/workflows/sphinx_docs_to_gh_pages.yaml | 1 + .github/workflows/tests.yaml | 2 +- 2 files changed, 2 insertions(+), 1 deletion(-) diff --git a/.github/workflows/sphinx_docs_to_gh_pages.yaml b/.github/workflows/sphinx_docs_to_gh_pages.yaml index 8d09f5e..0f1e8f5 100644 --- a/.github/workflows/sphinx_docs_to_gh_pages.yaml +++ b/.github/workflows/sphinx_docs_to_gh_pages.yaml @@ -30,6 +30,7 @@ jobs: pip install Cython pip install pysam pip install wheel + pip install --no-build-isolation git:+https://github.com/cgat-developers/cgat-apps.@v0.7.4 pip3 install --no-build-isolation .[docs] - name: Running Sphinx to gh-pages Action # Uncomment if only tagged releases are to have documentation built diff --git a/.github/workflows/tests.yaml b/.github/workflows/tests.yaml index 1fc3ab0..aac755b 100644 --- a/.github/workflows/tests.yaml +++ b/.github/workflows/tests.yaml @@ -47,7 +47,7 @@ jobs: pip install pysam pip install wheel pip install --no-build-isolation cgatcore - pip install --no-build-isolation cgat + pip install --no-build-isolation git:+https://github.com/cgat-developers/cgat-apps.@v0.7.4 pip install -e .[tests] - name: Test with pytest run: |