From 34892d8e36ad4fa743cfe9c7e186cdb372bf37ce Mon Sep 17 00:00:00 2001 From: Neil Shephard Date: Wed, 4 Dec 2024 15:21:45 +0000 Subject: [PATCH 1/5] tests: Switch order of `.bam` files in regression tests Of the two `.bam` files for regression testing one is an order of magnitude larger than the other. Switch the order so the smaller one is first and we can iterate faster when tests are failing using `pytest -x` when we need to look inside at objects and debug. --- ...rons_counts_and_info.test_main[file_1].out | 1694 ++++++----------- ...rons_counts_and_info.test_main[file_2].out | 1694 +++++++++++------ tests/test_all_introns_counts_and_info.py | 4 +- 3 files changed, 1696 insertions(+), 1696 deletions(-) diff --git a/tests/_regtest_outputs/test_all_introns_counts_and_info.test_main[file_1].out b/tests/_regtest_outputs/test_all_introns_counts_and_info.test_main[file_1].out index 509b96d..baf5fc3 100644 --- a/tests/_regtest_outputs/test_all_introns_counts_and_info.test_main[file_1].out +++ b/tests/_regtest_outputs/test_all_introns_counts_and_info.test_main[file_1].out @@ -1,1120 +1,578 @@ read_uid transcript_id start end chr strand assignment conversions convertible coverage -0 1 ENST00000442898 18174 18380 9 - Spl 0 64 272 -0 1 ENST00000442898 18492 24850 9 - Ret 0 64 272 -0 2 ENST00000442898 18174 18380 9 - Spl 0 64 272 -0 2 ENST00000442898 18492 24850 9 - Ret 0 64 272 -0 3 ENST00000442898 18174 18380 9 - Spl 1 60 256 -0 3 ENST00000442898 18492 24850 9 - Spl 1 60 256 -0 4 ENST00000442898 17855 18027 9 - Spl 0 57 170 -0 5 ENST00000442898 18174 18380 9 - Spl 0 60 256 -0 5 ENST00000442898 18492 24850 9 - Spl 0 60 256 -0 6 ENST00000442898 18174 18380 9 - Spl 0 60 256 -0 6 ENST00000442898 18492 24850 9 - Spl 0 60 256 -0 7 ENST00000442898 17479 17718 9 - Spl 0 64 299 -0 7 ENST00000442898 17855 18027 9 - Spl 0 64 299 -0 8 ENST00000442898 17479 17718 9 - Spl 1 65 251 -0 8 ENST00000442898 17855 18027 9 - Spl 1 65 251 -0 9 ENST00000442898 18174 18380 9 - Spl 0 57 277 -0 9 ENST00000442898 18492 24850 9 - Ret 0 57 277 -0 10 ENST00000442898 17479 17718 9 - Spl 0 62 300 -0 10 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 11 ENST00000442898 14940 15080 9 - Spl 0 48 267 -0 12 ENST00000442898 16061 16717 9 - Ret 0 68 300 -0 13 ENST00000442898 18492 24850 9 - Spl 0 57 153 -0 14 ENST00000442898 16061 16717 9 - Ret 0 51 295 -0 15 ENST00000442898 16061 16717 9 - Ret 0 51 295 -0 16 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 17 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 18 ENST00000442898 17166 17343 9 - Spl 1 62 221 -0 18 ENST00000442898 17479 17718 9 - Spl 1 62 221 -0 19 ENST00000442898 17855 18027 9 - Spl 1 43 123 -0 20 ENST00000442898 17855 18027 9 - Spl 1 43 123 -0 21 ENST00000442898 17166 17343 9 - Spl 0 60 300 -0 21 ENST00000442898 17855 18027 9 - Spl 0 60 300 -0 22 ENST00000442898 18492 24850 9 - Ret 0 59 214 -0 23 ENST00000442898 18492 24850 9 - Spl 0 57 153 -0 24 ENST00000442898 17166 17343 9 - Spl 0 56 300 -0 24 ENST00000442898 17855 18027 9 - Spl 0 56 300 -0 25 ENST00000442898 18174 18380 9 - Spl 1 57 299 -0 25 ENST00000442898 18492 24850 9 - Ret 1 57 299 -0 26 ENST00000442898 17166 17343 9 - Spl 1 65 267 -0 26 ENST00000442898 17479 17718 9 - Spl 1 65 267 -0 27 ENST00000442898 17855 18027 9 - Spl 0 48 300 -0 27 ENST00000442898 18174 18380 9 - Ret 0 48 300 -0 28 ENST00000442898 17855 18027 9 - Spl 0 51 300 -0 28 ENST00000442898 18174 18380 9 - Spl 0 51 300 -0 29 ENST00000442898 17479 17718 9 - Spl 2 63 183 -0 29 ENST00000442898 17855 18027 9 - Spl 2 63 183 -0 30 ENST00000442898 17479 17718 9 - Spl 2 63 183 -0 30 ENST00000442898 17855 18027 9 - Spl 2 63 183 -0 31 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 31 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 32 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 32 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 33 ENST00000442898 18492 24850 9 - Ret 0 45 118 -0 34 ENST00000442898 18492 24850 9 - Ret 0 45 118 -0 35 ENST00000442898 17166 17343 9 - Spl 0 59 300 -0 35 ENST00000442898 17479 17718 9 - Spl 0 59 300 -0 35 ENST00000442898 17855 18027 9 - Spl 0 59 300 -0 36 ENST00000442898 14940 15080 9 - Ret 0 42 300 -0 37 ENST00000442898 17166 17343 9 - Spl 0 59 300 -0 37 ENST00000442898 17479 17718 9 - Spl 0 59 300 -0 37 ENST00000442898 17855 18027 9 - Spl 0 59 300 -0 38 ENST00000442898 17166 17343 9 - Spl 0 66 213 -0 38 ENST00000442898 17479 17718 9 - Spl 0 66 213 -0 39 ENST00000442898 17479 17718 9 - Spl 0 67 299 -0 39 ENST00000442898 17855 18027 9 - Spl 0 67 299 -0 40 ENST00000442898 18174 18380 9 - Spl 0 57 277 -0 40 ENST00000442898 18492 24850 9 - Ret 0 57 277 -0 41 ENST00000442898 17479 17718 9 - Spl 0 63 192 -0 41 ENST00000442898 17855 18027 9 - Spl 0 63 192 -0 42 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 42 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 43 ENST00000442898 18492 24850 9 - Ret 0 58 219 -0 44 ENST00000442898 17166 17343 9 - Spl 0 60 300 -0 44 ENST00000442898 17855 18027 9 - Spl 0 60 300 -0 45 ENST00000442898 17855 18027 9 - Spl 0 53 300 -0 45 ENST00000442898 18492 24850 9 - Spl 0 53 300 -0 46 ENST00000442898 18174 18380 9 - Spl 0 69 300 -0 46 ENST00000442898 18492 24850 9 - Ret 0 69 300 -0 47 ENST00000442898 17479 17718 9 - Ret 2 59 300 -0 47 ENST00000442898 17855 18027 9 - Ret 2 59 300 -0 48 ENST00000442898 14940 15080 9 - Spl 0 48 267 -0 49 ENST00000442898 17479 17718 9 - Spl 0 60 292 -0 49 ENST00000442898 17855 18027 9 - Spl 0 60 292 -0 50 ENST00000442898 16061 16717 9 - Spl 0 49 289 -0 50 ENST00000442898 16876 16964 9 - Spl 0 49 289 -0 51 ENST00000442898 17166 17343 9 - Spl 1 62 221 -0 51 ENST00000442898 17479 17718 9 - Spl 1 62 221 -0 52 ENST00000442898 17479 17718 9 - Spl 0 60 292 -0 52 ENST00000442898 17855 18027 9 - Spl 0 60 292 -0 53 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 53 ENST00000442898 17855 18027 9 - Spl 0 63 300 -0 54 ENST00000442898 18492 24850 9 - Ret 0 58 219 -0 55 ENST00000442898 18492 24850 9 - Ret 0 58 219 -0 56 ENST00000442898 18174 18380 9 - Spl 0 57 277 -0 56 ENST00000442898 18492 24850 9 - Ret 0 57 277 -0 57 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 57 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 58 ENST00000442898 14940 15080 9 - Ret 0 42 300 -0 59 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 59 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 60 ENST00000442898 18492 24850 9 - Ret 0 59 300 -0 61 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 61 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 62 ENST00000442898 18174 18380 9 - Ret 0 67 297 -0 63 ENST00000442898 18174 18380 9 - Ret 0 67 297 -0 64 ENST00000442898 17166 17343 9 - Spl 0 65 218 -0 64 ENST00000442898 17479 17718 9 - Spl 0 65 218 -0 65 ENST00000442898 17166 17343 9 - Spl 1 65 267 -0 65 ENST00000442898 17479 17718 9 - Spl 1 65 267 -0 66 ENST00000442898 15149 15908 9 - Spl 0 38 268 -0 66 ENST00000442898 16061 16717 9 - Ret 0 38 268 -0 67 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 67 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 68 ENST00000442898 18174 18380 9 - Spl 0 59 262 -0 68 ENST00000442898 18492 24850 9 - Ret 0 59 262 -0 69 ENST00000442898 17166 17343 9 - Spl 0 63 285 -0 69 ENST00000442898 17479 17718 9 - Spl 0 63 285 -0 70 ENST00000442898 17166 17343 9 - Spl 0 63 298 -0 70 ENST00000442898 17479 17718 9 - Spl 0 63 298 -0 70 ENST00000442898 17855 18027 9 - Spl 0 63 298 -0 71 ENST00000442898 17479 17718 9 - Spl 0 64 299 -0 71 ENST00000442898 17855 18027 9 - Spl 0 64 299 -0 72 ENST00000442898 17479 17718 9 - Spl 0 64 299 -0 72 ENST00000442898 17855 18027 9 - Spl 0 64 299 -0 73 ENST00000442898 25004 29601 9 - Ret 0 63 235 -0 74 ENST00000442898 17479 17718 9 - Spl 1 65 300 -0 74 ENST00000442898 17855 18027 9 - Spl 1 65 300 -0 75 ENST00000442898 17166 17343 9 - Spl 1 68 242 -0 75 ENST00000442898 17479 17718 9 - Spl 1 68 242 -0 76 ENST00000442898 17479 17718 9 - Spl 0 64 270 -0 76 ENST00000442898 17855 18027 9 - Spl 0 64 270 -0 77 ENST00000442898 16876 16964 9 - Spl 2 55 136 -0 78 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 78 ENST00000442898 18492 24850 9 - Ret 2 65 300 -0 79 ENST00000442898 16061 16717 9 - Spl 1 48 273 -0 80 ENST00000442898 17479 17718 9 - Spl 0 67 299 -0 80 ENST00000442898 17855 18027 9 - Spl 0 67 299 -0 81 ENST00000442898 16061 16717 9 - Ret 0 68 300 -0 82 ENST00000442898 18174 18380 9 - Spl 0 60 256 -0 82 ENST00000442898 18492 24850 9 - Spl 0 60 256 -0 83 ENST00000442898 17479 17718 9 - Spl 1 61 213 -0 83 ENST00000442898 17855 18027 9 - Spl 1 61 213 -0 84 ENST00000442898 18174 18380 9 - Spl 0 69 300 -0 84 ENST00000442898 18492 24850 9 - Ret 0 69 300 -0 85 ENST00000442898 18174 18380 9 - Spl 0 69 300 -0 85 ENST00000442898 18492 24850 9 - Ret 0 69 300 -0 86 ENST00000442898 18174 18380 9 - Spl 0 60 271 -0 86 ENST00000442898 18492 24850 9 - Ret 0 60 271 -0 87 ENST00000442898 17479 17718 9 - Ret 0 61 282 -0 87 ENST00000442898 17855 18027 9 - Spl 0 61 282 -0 88 ENST00000442898 18174 18380 9 - Spl 1 57 299 -0 88 ENST00000442898 18492 24850 9 - Ret 1 57 299 -0 89 ENST00000442898 17479 17718 9 - Spl 0 64 299 -0 89 ENST00000442898 17855 18027 9 - Spl 0 64 299 -0 90 ENST00000442898 17479 17718 9 - Spl 2 65 300 -0 90 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 91 ENST00000442898 17479 17718 9 - Spl 2 65 300 -0 91 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 92 ENST00000442898 18492 24850 9 - Ret 0 58 219 -0 93 ENST00000442898 17479 17718 9 - Spl 1 62 268 -0 93 ENST00000442898 17855 18027 9 - Spl 1 62 268 -0 94 ENST00000442898 17855 18027 9 - Spl 1 55 275 -0 94 ENST00000442898 18174 18380 9 - Spl 1 55 275 -0 95 ENST00000442898 17855 18027 9 - Spl 0 53 300 -0 95 ENST00000442898 18492 24850 9 - Spl 0 53 300 -0 96 ENST00000442898 17479 17718 9 - Ret 1 61 282 -0 96 ENST00000442898 17855 18027 9 - Spl 1 61 282 -0 97 ENST00000442898 17479 17718 9 - Spl 1 65 142 -0 98 ENST00000442898 18174 18380 9 - Spl 0 60 254 -0 98 ENST00000442898 18492 24850 9 - Spl 0 60 254 -0 99 ENST00000442898 18492 24850 9 - Spl 1 58 169 -0 100 ENST00000442898 17479 17718 9 - Spl 0 64 299 -0 100 ENST00000442898 17855 18027 9 - Spl 0 64 299 -0 101 ENST00000442898 17479 17718 9 - Spl 0 64 299 -0 101 ENST00000442898 17855 18027 9 - Spl 0 64 299 -0 102 ENST00000442898 25004 29601 9 - Ret 0 63 235 -0 103 ENST00000442898 17479 17718 9 - Spl 2 64 270 -0 103 ENST00000442898 17855 18027 9 - Spl 2 64 270 -0 104 ENST00000442898 17855 18027 9 - Spl 0 47 149 -0 105 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 105 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 106 ENST00000442898 18492 24850 9 - Ret 0 60 229 -0 107 ENST00000442898 17479 17718 9 - Spl 0 62 293 -0 107 ENST00000442898 17855 18027 9 - Spl 0 62 293 -0 108 ENST00000442898 17855 18027 9 - Spl 0 48 300 -0 108 ENST00000442898 18174 18380 9 - Ret 0 48 300 -0 109 ENST00000442898 17855 18027 9 - Spl 0 53 300 -0 109 ENST00000442898 18492 24850 9 - Spl 0 53 300 -0 110 ENST00000442898 17166 17343 9 - Spl 0 56 300 -0 110 ENST00000442898 17855 18027 9 - Spl 0 56 300 -0 111 ENST00000442898 18174 18380 9 - Spl 0 60 271 -0 111 ENST00000442898 18492 24850 9 - Ret 0 60 271 -0 112 ENST00000442898 17166 17343 9 - Spl 1 60 298 -0 112 ENST00000442898 17479 17718 9 - Spl 1 60 298 -0 112 ENST00000442898 17855 18027 9 - Spl 1 60 298 -0 113 ENST00000442898 17479 17718 9 - Spl 2 65 300 -0 113 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 114 ENST00000442898 18174 18380 9 - Spl 0 59 262 -0 114 ENST00000442898 18492 24850 9 - Ret 0 59 262 -0 115 ENST00000442898 17855 18027 9 - Spl 1 53 300 -0 115 ENST00000442898 18492 24850 9 - Spl 1 53 300 -0 116 ENST00000442898 18492 24850 9 - Ret 0 51 219 -0 117 ENST00000442898 16061 16717 9 - Ret 1 52 300 -0 118 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 118 ENST00000442898 18492 24850 9 - Ret 2 65 300 -0 119 ENST00000442898 17855 18027 9 - Spl 1 47 248 -0 119 ENST00000442898 18174 18380 9 - Spl 1 47 248 -0 120 ENST00000442898 14940 15080 9 - Spl 0 49 293 -0 121 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 121 ENST00000442898 18492 24850 9 - Ret 2 65 300 -0 122 ENST00000442898 18174 18380 9 - Spl 0 60 256 -0 122 ENST00000442898 18492 24850 9 - Spl 0 60 256 -0 123 ENST00000442898 16061 16717 9 - Ret 1 52 300 -0 124 ENST00000442898 15149 15908 9 - Spl 0 40 132 -0 125 ENST00000442898 18492 24850 9 - Ret 0 59 214 -0 126 ENST00000442898 17166 17343 9 - Spl 0 59 132 -0 127 ENST00000442898 17479 17718 9 - Spl 0 64 299 -0 127 ENST00000442898 17855 18027 9 - Spl 0 64 299 -0 128 ENST00000442898 17855 18027 9 - Spl 2 37 110 -0 129 ENST00000442898 17479 17718 9 - Spl 1 61 213 -0 129 ENST00000442898 17855 18027 9 - Spl 1 61 213 -0 130 ENST00000442898 17166 17343 9 - Spl 0 66 213 -0 130 ENST00000442898 17479 17718 9 - Spl 0 66 213 -0 131 ENST00000442898 17166 17343 9 - Spl 0 66 213 -0 131 ENST00000442898 17479 17718 9 - Spl 0 66 213 -0 132 ENST00000442898 17479 17718 9 - Spl 1 61 213 -0 132 ENST00000442898 17855 18027 9 - Spl 1 61 213 -0 133 ENST00000442898 17479 17718 9 - Spl 1 61 213 -0 133 ENST00000442898 17855 18027 9 - Spl 1 61 213 -0 134 ENST00000442898 17855 18027 9 - Spl 1 53 300 -0 134 ENST00000442898 18492 24850 9 - Spl 1 53 300 -0 135 ENST00000442898 18492 24850 9 - Ret 0 59 214 -0 136 ENST00000442898 17479 17718 9 - Spl 1 65 262 -0 136 ENST00000442898 17855 18027 9 - Spl 1 65 262 -0 137 ENST00000442898 17479 17718 9 - Spl 1 65 300 -0 137 ENST00000442898 17855 18027 9 - Spl 1 65 300 -0 138 ENST00000442898 17479 17718 9 - Ret 3 59 214 -0 139 ENST00000442898 17855 18027 9 - Spl 1 47 248 -0 139 ENST00000442898 18174 18380 9 - Spl 1 47 248 -0 140 ENST00000442898 17855 18027 9 - Spl 0 52 222 -0 140 ENST00000442898 18174 18380 9 - Spl 0 52 222 -0 141 ENST00000442898 17855 18027 9 - Spl 0 52 222 -0 141 ENST00000442898 18174 18380 9 - Spl 0 52 222 -0 142 ENST00000442898 16061 16717 9 - Spl 0 49 289 -0 142 ENST00000442898 16876 16964 9 - Spl 0 49 289 -0 143 ENST00000442898 17855 18027 9 - Spl 0 51 300 -0 143 ENST00000442898 18174 18380 9 - Spl 0 51 300 -0 144 ENST00000442898 17479 17718 9 - Ret 2 59 300 -0 144 ENST00000442898 17855 18027 9 - Ret 2 59 300 -0 145 ENST00000442898 17166 17343 9 - Spl 0 66 213 -0 145 ENST00000442898 17479 17718 9 - Spl 0 66 213 -0 146 ENST00000442898 18492 24850 9 - Spl 0 58 169 -0 147 ENST00000442898 17479 17718 9 - Spl 0 63 192 -0 147 ENST00000442898 17855 18027 9 - Spl 0 63 192 -0 148 ENST00000442898 25004 29601 9 - Ret 0 63 235 -0 149 ENST00000442898 25004 29601 9 - Ret 0 58 282 -0 150 ENST00000442898 18174 18380 9 - Ret 1 56 284 -0 150 ENST00000442898 18492 24850 9 - Ret 1 56 284 -0 151 ENST00000442898 17479 17718 9 - Spl 0 60 292 -0 151 ENST00000442898 17855 18027 9 - Spl 0 60 292 -0 152 ENST00000442898 17166 17343 9 - Spl 0 63 285 -0 152 ENST00000442898 17479 17718 9 - Spl 0 63 285 -0 153 ENST00000442898 17479 17718 9 - Ret 3 59 214 -0 154 ENST00000442898 17479 17718 9 - Ret 3 59 214 -0 155 ENST00000442898 17166 17343 9 - Spl 0 60 300 -0 155 ENST00000442898 17855 18027 9 - Spl 0 60 300 -0 156 ENST00000442898 16061 16717 9 - Spl 1 48 273 -0 157 ENST00000442898 17855 18027 9 - Spl 1 55 275 -0 157 ENST00000442898 18174 18380 9 - Spl 1 55 275 -0 158 ENST00000442898 17479 17718 9 - Ret 2 62 300 -0 159 ENST00000442898 17479 17718 9 - Ret 2 62 300 -0 160 ENST00000442898 17855 18027 9 - Spl 1 53 300 -0 160 ENST00000442898 18492 24850 9 - Spl 1 53 300 -0 161 ENST00000442898 15149 15908 9 - Spl 1 40 132 -0 162 ENST00000442898 17479 17718 9 - Spl 1 65 262 -0 162 ENST00000442898 17855 18027 9 - Spl 1 65 262 -0 163 ENST00000442898 16061 16717 9 - Ret 0 51 295 -0 164 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 164 ENST00000442898 17479 17718 9 - Spl 0 63 300 -0 164 ENST00000442898 17855 18027 9 - Spl 0 63 300 -0 165 ENST00000442898 18174 18380 9 - Spl 1 62 181 -0 166 ENST00000442898 17479 17718 9 - Spl 0 60 292 -0 166 ENST00000442898 17855 18027 9 - Spl 0 60 292 -0 167 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 168 ENST00000442898 17479 17718 9 - Spl 0 62 202 -0 168 ENST00000442898 17855 18027 9 - Spl 0 62 202 -0 169 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 169 ENST00000442898 17479 17718 9 - Spl 0 62 300 -0 170 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 170 ENST00000442898 17479 17718 9 - Spl 0 62 300 -0 171 ENST00000442898 16061 16717 9 - Ret 0 51 295 -0 172 ENST00000442898 17166 17343 9 - Spl 0 60 300 -0 172 ENST00000442898 17855 18027 9 - Spl 0 60 300 -0 173 ENST00000442898 18174 18380 9 - Spl 0 57 143 -0 174 ENST00000442898 17479 17718 9 - Ret 3 59 214 -0 175 ENST00000442898 17855 18027 9 - Spl 1 48 152 -0 176 ENST00000442898 16061 16717 9 - Spl 1 48 273 -0 177 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 178 ENST00000442898 17479 17718 9 - Spl 1 61 213 -0 178 ENST00000442898 17855 18027 9 - Spl 1 61 213 -0 179 ENST00000442898 17479 17718 9 - Spl 1 65 262 -0 179 ENST00000442898 17855 18027 9 - Spl 1 65 262 -0 180 ENST00000442898 16061 16717 9 - Ret 0 51 295 -0 181 ENST00000442898 17855 18027 9 - Spl 1 50 155 -0 182 ENST00000442898 18174 18380 9 - Spl 1 62 181 -0 183 ENST00000442898 17855 18027 9 - Spl 0 53 300 -0 183 ENST00000442898 18492 24850 9 - Spl 0 53 300 -0 184 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 184 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 185 ENST00000442898 17855 18027 9 - Spl 1 50 155 -0 186 ENST00000442898 17479 17718 9 - Spl 1 60 299 -0 186 ENST00000442898 17855 18027 9 - Spl 1 60 299 -0 187 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 187 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 188 ENST00000442898 17855 18027 9 - Spl 1 53 300 -0 188 ENST00000442898 18492 24850 9 - Spl 1 53 300 -0 189 ENST00000442898 25004 29601 9 - Ret 0 63 235 -0 190 ENST00000442898 25004 29601 9 - Ret 0 63 235 -0 191 ENST00000442898 16061 16717 9 - Ret 0 51 295 -0 192 ENST00000442898 17166 17343 9 - Spl 0 63 298 -0 192 ENST00000442898 17479 17718 9 - Spl 0 63 298 -0 192 ENST00000442898 17855 18027 9 - Spl 0 63 298 -0 193 ENST00000442898 17166 17343 9 - Spl 0 63 285 -0 193 ENST00000442898 17479 17718 9 - Spl 0 63 285 -0 194 ENST00000442898 17166 17343 9 - Spl 1 68 242 -0 194 ENST00000442898 17479 17718 9 - Spl 1 68 242 -0 195 ENST00000442898 18174 18380 9 - Spl 1 54 138 -0 196 ENST00000442898 18174 18380 9 - Spl 0 54 138 +0 1 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 2 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 2 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 3 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 3 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 4 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 4 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 5 ENST00000442898 16876 16964 9 - Spl 0 46 270 +0 6 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 6 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 7 ENST00000442898 16061 16717 9 - Ret 0 49 177 +0 8 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 8 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 9 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 9 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 10 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 10 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 11 ENST00000442898 18174 18380 9 - Spl 0 65 176 +0 11 ENST00000442898 18492 24850 9 - Spl 0 65 176 +0 12 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 13 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 13 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 14 ENST00000442898 17479 17718 9 - Spl 0 66 299 +0 14 ENST00000442898 17855 18027 9 - Spl 0 66 299 +0 15 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 16 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 16 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 17 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 17 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 18 ENST00000442898 18174 18380 9 - Spl 0 65 176 +0 18 ENST00000442898 18492 24850 9 - Spl 0 65 176 +0 19 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 20 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 20 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 21 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 21 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 22 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 22 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 23 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 23 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 24 ENST00000442898 18174 18380 9 - Spl 0 65 176 +0 24 ENST00000442898 18492 24850 9 - Spl 0 65 176 +0 25 ENST00000442898 18174 18380 9 - Spl 0 65 176 +0 25 ENST00000442898 18492 24850 9 - Spl 0 65 176 +0 26 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 27 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 28 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 28 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 29 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 29 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 30 ENST00000442898 17855 18027 9 - Spl 1 50 221 +0 30 ENST00000442898 18174 18380 9 - Spl 1 50 221 +0 31 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 32 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 32 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 33 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 33 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 34 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 34 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 35 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 35 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 36 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 36 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 37 ENST00000442898 17479 17718 9 - Spl 0 58 166 +0 37 ENST00000442898 17855 18027 9 - Spl 0 58 166 +0 38 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 39 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 39 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 40 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 40 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 41 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 41 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 42 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 43 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 44 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 44 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 45 ENST00000442898 17479 17718 9 - Spl 1 63 194 +0 46 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 46 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 47 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 47 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 48 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 49 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 49 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 50 ENST00000442898 14940 15080 9 - Spl 0 52 134 +0 51 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 51 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 52 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 52 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 53 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 54 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 54 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 55 ENST00000442898 16876 16964 9 - Spl 0 46 270 +0 56 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 56 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 57 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 57 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 58 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 59 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 60 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 60 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 61 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 62 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 62 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 63 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 63 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 64 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 64 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 65 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 66 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 66 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 67 ENST00000442898 17479 17718 9 - Spl 0 63 194 +0 68 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 68 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 69 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 70 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 70 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 71 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 72 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 73 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 73 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 74 ENST00000442898 16876 16964 9 - Spl 0 46 270 +0 75 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 75 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 76 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 76 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 77 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 77 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 78 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 79 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 79 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 80 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 80 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 81 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 82 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 83 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 83 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 84 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 84 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 85 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 85 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 86 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 87 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 87 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 88 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 88 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 89 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 89 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 90 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 90 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 91 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 92 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 93 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 93 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 94 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 94 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 95 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 95 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 96 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 97 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 98 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 99 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 99 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 100 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 101 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 101 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 102 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 102 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 103 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 103 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 104 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 105 ENST00000442898 17479 17718 9 - Spl 0 63 194 +0 106 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 106 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 107 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 107 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 108 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 109 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 110 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 111 ENST00000442898 17166 17343 9 - Spl 0 57 125 +0 112 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 112 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 113 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 114 ENST00000442898 17479 17718 9 - Spl 0 58 166 +0 114 ENST00000442898 17855 18027 9 - Spl 0 58 166 +0 115 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 116 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 117 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 117 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 118 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 118 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 119 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 119 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 120 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 121 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 121 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 122 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 122 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 123 ENST00000442898 16876 16964 9 - Spl 0 46 270 +0 124 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 124 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 125 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 125 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 126 ENST00000442898 16061 16717 9 - Ret 0 49 177 +0 127 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 127 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 128 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 129 ENST00000442898 18174 18380 9 - Spl 1 59 227 +0 129 ENST00000442898 18492 24850 9 - Spl 1 59 227 +0 130 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 131 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 131 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 132 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 132 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 133 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 133 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 134 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 135 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 136 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 136 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 137 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 138 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 139 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 140 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 140 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 141 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 142 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 142 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 143 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 143 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 144 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 144 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 145 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 145 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 146 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 146 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 147 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 148 ENST00000442898 17479 17718 9 - Spl 1 65 234 +0 148 ENST00000442898 17855 18027 9 - Spl 1 65 234 +0 149 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 150 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 150 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 151 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 152 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 152 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 153 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 153 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 154 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 154 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 155 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 155 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 156 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 156 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 157 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 157 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 158 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 159 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 160 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 160 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 161 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 161 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 162 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 163 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 163 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 164 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 164 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 165 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 165 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 166 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 166 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 167 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 167 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 168 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 168 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 169 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 170 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 171 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 171 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 172 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 173 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 173 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 174 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 174 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 175 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 175 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 176 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 176 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 177 ENST00000442898 17479 17718 9 - Spl 1 65 300 +0 177 ENST00000442898 18174 18380 9 - Spl 1 65 300 +0 178 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 178 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 179 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 179 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 180 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 180 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 181 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 181 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 182 ENST00000442898 17479 17718 9 - Spl 0 58 166 +0 182 ENST00000442898 17855 18027 9 - Spl 0 58 166 +0 183 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 183 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 184 ENST00000442898 16061 16717 9 - Ret 0 49 177 +0 185 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 186 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 186 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 187 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 187 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 188 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 189 ENST00000442898 16061 16717 9 - Ret 0 49 177 +0 190 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 190 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 191 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 191 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 192 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 192 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 193 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 193 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 194 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 194 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 195 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 195 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 196 ENST00000442898 18174 18380 9 - Spl 0 65 176 +0 196 ENST00000442898 18492 24850 9 - Spl 0 65 176 0 197 ENST00000442898 18174 18380 9 - Spl 0 65 176 -0 198 ENST00000442898 17855 18027 9 - Spl 0 47 149 -0 199 ENST00000442898 17166 17343 9 - Spl 0 66 213 -0 199 ENST00000442898 17479 17718 9 - Spl 0 66 213 -0 200 ENST00000442898 14940 15080 9 - Spl 0 54 125 -0 200 ENST00000442898 15149 15908 9 - Spl 0 54 125 -0 201 ENST00000442898 14940 15080 9 - Ret 0 42 300 -0 202 ENST00000442898 17166 17343 9 - Spl 0 65 206 -0 203 ENST00000442898 17479 17718 9 - Spl 1 65 251 -0 203 ENST00000442898 17855 18027 9 - Spl 1 65 251 -0 204 ENST00000442898 17479 17718 9 - Spl 1 65 251 -0 204 ENST00000442898 17855 18027 9 - Spl 1 65 251 -0 205 ENST00000442898 18174 18380 9 - Spl 0 69 300 -0 205 ENST00000442898 18492 24850 9 - Ret 0 69 300 -0 206 ENST00000442898 18174 18380 9 - Spl 0 69 300 -0 206 ENST00000442898 18492 24850 9 - Ret 0 69 300 -0 207 ENST00000442898 18492 24850 9 - Spl 0 57 153 -0 208 ENST00000442898 17479 17718 9 - Spl 1 61 213 -0 208 ENST00000442898 17855 18027 9 - Spl 1 61 213 -0 209 ENST00000442898 17855 18027 9 - Ret 2 36 300 -0 210 ENST00000442898 17479 17718 9 - Ret 0 45 213 -0 210 ENST00000442898 17855 18027 9 - Ret 0 45 213 -0 211 ENST00000442898 18174 18380 9 - Ret 0 67 297 -0 212 ENST00000442898 17855 18027 9 - Spl 1 59 300 -0 212 ENST00000442898 18174 18380 9 - Spl 1 59 300 -0 212 ENST00000442898 18492 24850 9 - Spl 1 59 300 -0 213 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 213 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 214 ENST00000442898 17479 17718 9 - Spl 0 64 270 -0 214 ENST00000442898 17855 18027 9 - Spl 0 64 270 -0 215 ENST00000442898 17166 17343 9 - Spl 0 59 300 -0 215 ENST00000442898 17479 17718 9 - Spl 0 59 300 -0 215 ENST00000442898 17855 18027 9 - Spl 0 59 300 -0 216 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 216 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 217 ENST00000442898 17479 17718 9 - Ret 0 61 282 -0 217 ENST00000442898 17855 18027 9 - Spl 0 61 282 -0 218 ENST00000442898 15149 15908 9 - Spl 0 40 300 -0 219 ENST00000442898 15149 15908 9 - Spl 0 40 300 -0 220 ENST00000442898 17479 17718 9 - Spl 0 60 299 -0 220 ENST00000442898 17855 18027 9 - Spl 0 60 299 -0 221 ENST00000442898 17479 17718 9 - Spl 1 61 213 -0 221 ENST00000442898 17855 18027 9 - Spl 1 61 213 -0 222 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 222 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 223 ENST00000442898 17855 18027 9 - Ret 2 36 300 -0 224 ENST00000442898 17855 18027 9 - Spl 1 55 275 -0 224 ENST00000442898 18174 18380 9 - Spl 1 55 275 -0 225 ENST00000442898 17855 18027 9 - Spl 1 55 275 -0 225 ENST00000442898 18174 18380 9 - Spl 1 55 275 -0 226 ENST00000442898 25004 29601 9 - Ret 0 63 235 -0 227 ENST00000442898 25004 29601 9 - Ret 0 63 235 -0 228 ENST00000442898 17479 17718 9 - Spl 0 64 299 -0 228 ENST00000442898 17855 18027 9 - Spl 0 64 299 -0 229 ENST00000442898 17855 18027 9 - Spl 1 55 275 -0 229 ENST00000442898 18174 18380 9 - Spl 1 55 275 -0 230 ENST00000442898 18174 18380 9 - Spl 1 49 300 -0 231 ENST00000442898 17479 17718 9 - Ret 0 61 282 -0 231 ENST00000442898 17855 18027 9 - Spl 0 61 282 -0 232 ENST00000442898 18174 18380 9 - Spl 1 57 299 -0 232 ENST00000442898 18492 24850 9 - Ret 1 57 299 -0 233 ENST00000442898 17479 17718 9 - Spl 1 65 300 -0 233 ENST00000442898 17855 18027 9 - Spl 1 65 300 -0 234 ENST00000442898 18492 24850 9 - Ret 0 51 219 -0 235 ENST00000442898 17479 17718 9 - Spl 0 62 300 -0 235 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 236 ENST00000442898 17479 17718 9 - Spl 1 62 300 -0 236 ENST00000442898 17855 18027 9 - Spl 1 62 300 -0 236 ENST00000442898 18174 18380 9 - Spl 1 62 300 -0 237 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 237 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 238 ENST00000442898 17479 17718 9 - Spl 2 63 183 -0 238 ENST00000442898 17855 18027 9 - Spl 2 63 183 -0 239 ENST00000442898 18174 18380 9 - Ret 0 67 297 -0 240 ENST00000442898 18492 24850 9 - Ret 0 51 218 -0 241 ENST00000442898 17479 17718 9 - Spl 0 63 192 -0 241 ENST00000442898 17855 18027 9 - Spl 0 63 192 -0 242 ENST00000442898 18174 18380 9 - Spl 0 64 272 -0 242 ENST00000442898 18492 24850 9 - Ret 0 64 272 -0 243 ENST00000442898 15149 15908 9 - Spl 0 38 268 -0 243 ENST00000442898 16061 16717 9 - Ret 0 38 268 -0 244 ENST00000442898 17855 18027 9 - Spl 1 55 275 -0 244 ENST00000442898 18174 18380 9 - Spl 1 55 275 -0 245 ENST00000442898 17479 17718 9 - Spl 2 65 300 -0 245 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 246 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 246 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 247 ENST00000442898 16061 16717 9 - Ret 0 68 300 -0 248 ENST00000442898 16061 16717 9 - Spl 1 48 273 -0 249 ENST00000442898 18174 18380 9 - Spl 0 60 256 -0 249 ENST00000442898 18492 24850 9 - Spl 0 60 256 -0 250 ENST00000442898 16061 16717 9 - Ret 1 52 300 -0 251 ENST00000442898 17855 18027 9 - Spl 0 53 300 -0 251 ENST00000442898 18492 24850 9 - Spl 0 53 300 -0 252 ENST00000442898 18174 18380 9 - Ret 2 41 288 -0 253 ENST00000442898 17855 18027 9 - Spl 1 53 300 -0 253 ENST00000442898 18492 24850 9 - Spl 1 53 300 -0 254 ENST00000442898 17855 18027 9 - Spl 1 56 291 -0 254 ENST00000442898 18174 18380 9 - Spl 1 56 291 -0 254 ENST00000442898 18492 24850 9 - Ret 1 56 291 -0 255 ENST00000442898 17855 18027 9 - Spl 1 53 300 -0 255 ENST00000442898 18492 24850 9 - Spl 1 53 300 -0 256 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 256 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 257 ENST00000442898 25004 29601 9 - Ret 0 63 235 -0 258 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 258 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 259 ENST00000442898 17855 18027 9 - Spl 2 37 110 -0 260 ENST00000442898 25004 29601 9 - Ret 0 63 235 -0 261 ENST00000442898 17479 17718 9 - Spl 2 63 183 -0 261 ENST00000442898 17855 18027 9 - Spl 2 63 183 -0 262 ENST00000442898 17166 17343 9 - Spl 0 60 300 -0 262 ENST00000442898 17855 18027 9 - Spl 0 60 300 -0 263 ENST00000442898 17166 17343 9 - Spl 0 60 300 -0 263 ENST00000442898 17855 18027 9 - Spl 0 60 300 -0 264 ENST00000442898 17166 17343 9 - Spl 0 60 300 -0 264 ENST00000442898 17855 18027 9 - Spl 0 60 300 -0 265 ENST00000442898 18174 18380 9 - Spl 0 65 176 -0 266 ENST00000442898 17479 17718 9 - Ret 2 59 300 -0 266 ENST00000442898 17855 18027 9 - Ret 2 59 300 -0 267 ENST00000442898 17479 17718 9 - Ret 3 59 300 -0 267 ENST00000442898 17855 18027 9 - Ret 3 59 300 -0 268 ENST00000442898 17479 17718 9 - Spl 0 66 298 -0 268 ENST00000442898 18174 18380 9 - Spl 0 66 298 -0 269 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 269 ENST00000442898 17479 17718 9 - Spl 0 62 300 -0 270 ENST00000442898 18174 18380 9 - Spl 0 58 160 -0 271 ENST00000442898 17479 17718 9 - Spl 1 61 213 -0 271 ENST00000442898 17855 18027 9 - Spl 1 61 213 -0 272 ENST00000442898 17479 17718 9 - Ret 2 59 300 -0 272 ENST00000442898 17855 18027 9 - Ret 2 59 300 -0 273 ENST00000442898 17166 17343 9 - Spl 2 68 242 -0 273 ENST00000442898 17479 17718 9 - Spl 2 68 242 -0 274 ENST00000442898 17166 17343 9 - Spl 1 62 221 -0 274 ENST00000442898 17479 17718 9 - Spl 1 62 221 -0 275 ENST00000442898 18174 18380 9 - Spl 0 57 277 -0 275 ENST00000442898 18492 24850 9 - Ret 0 57 277 -0 276 ENST00000442898 17166 17343 9 - Spl 0 59 300 -0 276 ENST00000442898 17855 18027 9 - Spl 0 59 300 -0 277 ENST00000442898 18174 18380 9 - Ret 0 67 297 -0 278 ENST00000442898 18492 24850 9 - Ret 0 60 292 -0 279 ENST00000442898 17479 17718 9 - Ret 2 62 300 -0 280 ENST00000442898 17479 17718 9 - Ret 2 62 300 -0 281 ENST00000442898 17166 17343 9 - Spl 0 63 285 -0 281 ENST00000442898 17479 17718 9 - Spl 0 63 285 -0 282 ENST00000442898 17166 17343 9 - Spl 0 59 300 -0 282 ENST00000442898 17479 17718 9 - Spl 0 59 300 -0 282 ENST00000442898 17855 18027 9 - Spl 0 59 300 -0 283 ENST00000442898 17166 17343 9 - Spl 1 65 267 -0 283 ENST00000442898 17479 17718 9 - Spl 1 65 267 -0 284 ENST00000442898 17479 17718 9 - Spl 0 64 299 -0 284 ENST00000442898 17855 18027 9 - Spl 0 64 299 -0 285 ENST00000442898 18174 18380 9 - Spl 0 59 262 -0 285 ENST00000442898 18492 24850 9 - Ret 0 59 262 -0 286 ENST00000442898 18174 18380 9 - Spl 0 59 262 -0 286 ENST00000442898 18492 24850 9 - Ret 0 59 262 -0 287 ENST00000442898 17479 17718 9 - Spl 1 65 251 -0 287 ENST00000442898 17855 18027 9 - Spl 1 65 251 -0 288 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 289 ENST00000442898 17479 17718 9 - Ret 0 45 213 -0 289 ENST00000442898 17855 18027 9 - Ret 0 45 213 -0 290 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 291 ENST00000442898 17166 17343 9 - Spl 0 60 300 -0 291 ENST00000442898 17855 18027 9 - Spl 0 60 300 -0 292 ENST00000442898 17479 17718 9 - Ret 0 63 197 -0 292 ENST00000442898 17855 18027 9 - Spl 0 63 197 -0 293 ENST00000442898 17479 17718 9 - Ret 0 63 197 -0 293 ENST00000442898 17855 18027 9 - Spl 0 63 197 -0 294 ENST00000442898 18174 18380 9 - Spl 1 57 299 -0 294 ENST00000442898 18492 24850 9 - Ret 1 57 299 -0 295 ENST00000442898 17855 18027 9 - Ret 2 45 147 -0 296 ENST00000442898 17479 17718 9 - Spl 1 61 213 -0 296 ENST00000442898 17855 18027 9 - Spl 1 61 213 -0 297 ENST00000442898 17479 17718 9 - Spl 0 60 292 -0 297 ENST00000442898 17855 18027 9 - Spl 0 60 292 -0 298 ENST00000442898 17479 17718 9 - Spl 0 60 292 -0 298 ENST00000442898 17855 18027 9 - Spl 0 60 292 -0 299 ENST00000442898 18174 18380 9 - Spl 0 60 256 -0 299 ENST00000442898 18492 24850 9 - Spl 0 60 256 -0 300 ENST00000442898 18174 18380 9 - Spl 0 60 256 -0 300 ENST00000442898 18492 24850 9 - Spl 0 60 256 -0 301 ENST00000442898 17166 17343 9 - Spl 1 65 267 -0 301 ENST00000442898 17479 17718 9 - Spl 1 65 267 -0 302 ENST00000442898 17166 17343 9 - Spl 1 65 267 -0 302 ENST00000442898 17479 17718 9 - Spl 1 65 267 -0 303 ENST00000442898 18174 18380 9 - Spl 1 49 300 -0 304 ENST00000442898 18174 18380 9 - Spl 0 54 300 -0 304 ENST00000442898 18492 24850 9 - Ret 0 54 300 -0 305 ENST00000442898 18492 24850 9 - Ret 0 60 292 -0 306 ENST00000442898 16061 16717 9 - Ret 1 52 300 -0 307 ENST00000442898 17166 17343 9 - Spl 1 63 242 -0 307 ENST00000442898 17479 17718 9 - Spl 1 63 242 -0 308 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 308 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 309 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 309 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 310 ENST00000442898 17479 17718 9 - Ret 0 61 282 -0 310 ENST00000442898 17855 18027 9 - Spl 0 61 282 -0 311 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 311 ENST00000442898 17479 17718 9 - Spl 0 62 300 -0 312 ENST00000442898 17479 17718 9 - Spl 0 62 293 -0 312 ENST00000442898 17855 18027 9 - Spl 0 62 293 -0 313 ENST00000442898 17855 18027 9 - Spl 1 53 300 -0 313 ENST00000442898 18492 24850 9 - Spl 1 53 300 -0 314 ENST00000442898 17479 17718 9 - Spl 0 60 292 -0 314 ENST00000442898 17855 18027 9 - Spl 0 60 292 -0 315 ENST00000442898 17479 17718 9 - Spl 0 60 292 -0 315 ENST00000442898 17855 18027 9 - Spl 0 60 292 -0 316 ENST00000442898 17166 17343 9 - Spl 1 61 227 -0 316 ENST00000442898 17479 17718 9 - Spl 1 61 227 -0 317 ENST00000442898 18174 18380 9 - Spl 1 57 299 -0 317 ENST00000442898 18492 24850 9 - Ret 1 57 299 -0 318 ENST00000442898 18174 18380 9 - Spl 1 57 299 -0 318 ENST00000442898 18492 24850 9 - Ret 1 57 299 -0 319 ENST00000442898 18174 18380 9 - Spl 1 57 299 -0 319 ENST00000442898 18492 24850 9 - Ret 1 57 299 -0 320 ENST00000442898 18174 18380 9 - Spl 0 54 300 -0 320 ENST00000442898 18492 24850 9 - Ret 0 54 300 -0 321 ENST00000442898 17855 18027 9 - Ret 2 36 300 -0 322 ENST00000442898 16061 16717 9 - Ret 1 52 300 -0 323 ENST00000442898 17855 18027 9 - Ret 2 36 300 -0 324 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 325 ENST00000442898 17855 18027 9 - Spl 1 48 152 -0 326 ENST00000442898 18492 24850 9 - Spl 0 58 169 -0 327 ENST00000442898 17479 17718 9 - Ret 0 45 213 -0 327 ENST00000442898 17855 18027 9 - Ret 0 45 213 -0 328 ENST00000442898 18174 18380 9 - Spl 0 57 277 -0 328 ENST00000442898 18492 24850 9 - Ret 0 57 277 -0 329 ENST00000442898 17855 18027 9 - Spl 1 55 275 -0 329 ENST00000442898 18174 18380 9 - Spl 1 55 275 -0 330 ENST00000442898 17479 17718 9 - Spl 1 62 268 -0 330 ENST00000442898 17855 18027 9 - Spl 1 62 268 -0 331 ENST00000442898 17479 17718 9 - Spl 1 62 268 -0 331 ENST00000442898 17855 18027 9 - Spl 1 62 268 -0 332 ENST00000442898 17855 18027 9 - Spl 2 36 111 -0 333 ENST00000442898 14940 15080 9 - Ret 0 42 300 -0 334 ENST00000442898 18492 24850 9 - Ret 0 60 229 -0 335 ENST00000442898 15149 15908 9 - Spl 0 40 300 -0 336 ENST00000442898 18174 18380 9 - Spl 1 64 212 -0 336 ENST00000442898 18492 24850 9 - Ret 1 64 212 -0 337 ENST00000442898 17479 17718 9 - Ret 2 62 300 -0 338 ENST00000442898 17166 17343 9 - Spl 1 62 221 -0 338 ENST00000442898 17479 17718 9 - Spl 1 62 221 -0 339 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 339 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 340 ENST00000442898 17166 17343 9 - Spl 1 62 300 -0 340 ENST00000442898 17855 18027 9 - Spl 1 62 300 -0 341 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 341 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 342 ENST00000442898 17479 17718 9 - Spl 1 65 262 -0 342 ENST00000442898 17855 18027 9 - Spl 1 65 262 -0 343 ENST00000442898 17479 17718 9 - Spl 1 65 251 -0 343 ENST00000442898 17855 18027 9 - Spl 1 65 251 -0 344 ENST00000442898 15149 15908 9 - Spl 0 40 300 -0 345 ENST00000442898 17479 17718 9 - Spl 2 65 300 -0 345 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 346 ENST00000442898 18174 18380 9 - Spl 1 57 299 -0 346 ENST00000442898 18492 24850 9 - Ret 1 57 299 -0 347 ENST00000442898 17479 17718 9 - Spl 0 62 202 -0 347 ENST00000442898 17855 18027 9 - Spl 0 62 202 -0 348 ENST00000442898 17855 18027 9 - Spl 0 48 299 -0 348 ENST00000442898 18174 18380 9 - Ret 0 48 299 -0 349 ENST00000442898 17479 17718 9 - Ret 2 62 300 -0 350 ENST00000442898 17479 17718 9 - Ret 2 62 300 -0 351 ENST00000442898 16061 16717 9 - Ret 1 52 300 -0 352 ENST00000442898 16061 16717 9 - Ret 1 52 300 -0 353 ENST00000442898 18174 18380 9 - Spl 1 49 300 -0 354 ENST00000442898 14940 15080 9 - Ret 0 42 300 -0 355 ENST00000442898 17166 17343 9 - Spl 1 62 221 -0 355 ENST00000442898 17479 17718 9 - Spl 1 62 221 -0 356 ENST00000442898 18174 18380 9 - Spl 1 64 212 -0 356 ENST00000442898 18492 24850 9 - Ret 1 64 212 -0 357 ENST00000442898 17166 17343 9 - Spl 0 66 213 -0 357 ENST00000442898 17479 17718 9 - Spl 0 66 213 -0 358 ENST00000442898 18174 18380 9 - Spl 0 54 300 -0 358 ENST00000442898 18492 24850 9 - Ret 0 54 300 -0 359 ENST00000442898 18492 24850 9 - Ret 0 59 214 -0 360 ENST00000442898 15149 15908 9 - Spl 0 38 268 -0 360 ENST00000442898 16061 16717 9 - Ret 0 38 268 -0 361 ENST00000442898 17479 17718 9 - Ret 0 65 300 -0 361 ENST00000442898 17855 18027 9 - Spl 0 65 300 -0 361 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 362 ENST00000442898 18174 18380 9 - Spl 0 60 271 -0 362 ENST00000442898 18492 24850 9 - Ret 0 60 271 -0 363 ENST00000442898 17479 17718 9 - Ret 0 45 213 -0 363 ENST00000442898 17855 18027 9 - Ret 0 45 213 -0 364 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 364 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 365 ENST00000442898 17166 17343 9 - Spl 0 63 298 -0 365 ENST00000442898 17479 17718 9 - Spl 0 63 298 -0 365 ENST00000442898 17855 18027 9 - Spl 0 63 298 -0 366 ENST00000442898 17479 17718 9 - Spl 2 70 208 -0 367 ENST00000442898 17479 17718 9 - Ret 2 59 300 -0 367 ENST00000442898 17855 18027 9 - Ret 2 59 300 -0 368 ENST00000442898 17479 17718 9 - Ret 0 61 282 -0 368 ENST00000442898 17855 18027 9 - Spl 0 61 282 -0 369 ENST00000442898 17166 17343 9 - Spl 0 65 218 -0 369 ENST00000442898 17479 17718 9 - Spl 0 65 218 -0 370 ENST00000442898 17166 17343 9 - Spl 1 60 298 -0 370 ENST00000442898 17479 17718 9 - Spl 1 60 298 -0 370 ENST00000442898 17855 18027 9 - Spl 1 60 298 -0 371 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 371 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 372 ENST00000442898 18174 18380 9 - Spl 1 64 212 -0 372 ENST00000442898 18492 24850 9 - Ret 1 64 212 -0 373 ENST00000442898 17855 18027 9 - Spl 1 56 291 -0 373 ENST00000442898 18174 18380 9 - Spl 1 56 291 -0 373 ENST00000442898 18492 24850 9 - Ret 1 56 291 -0 374 ENST00000442898 17855 18027 9 - Spl 1 56 291 -0 374 ENST00000442898 18174 18380 9 - Spl 1 56 291 -0 374 ENST00000442898 18492 24850 9 - Ret 1 56 291 -0 375 ENST00000442898 18174 18380 9 - Spl 0 64 272 -0 375 ENST00000442898 18492 24850 9 - Ret 0 64 272 -0 376 ENST00000442898 17479 17718 9 - Spl 2 65 300 -0 376 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 377 ENST00000442898 18174 18380 9 - Spl 0 69 300 -0 377 ENST00000442898 18492 24850 9 - Ret 0 69 300 -0 378 ENST00000442898 17479 17718 9 - Spl 1 62 300 -0 378 ENST00000442898 17855 18027 9 - Spl 1 62 300 -0 378 ENST00000442898 18174 18380 9 - Spl 1 62 300 -0 379 ENST00000442898 17166 17343 9 - Spl 0 63 298 -0 379 ENST00000442898 17479 17718 9 - Spl 0 63 298 -0 379 ENST00000442898 17855 18027 9 - Spl 0 63 298 -0 380 ENST00000442898 17479 17718 9 - Spl 0 62 300 -0 380 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 381 ENST00000442898 17855 18027 9 - Spl 0 62 181 -0 382 ENST00000442898 17479 17718 9 - Ret 2 59 300 -0 382 ENST00000442898 17855 18027 9 - Ret 2 59 300 -0 383 ENST00000442898 17479 17718 9 - Ret 2 59 300 -0 383 ENST00000442898 17855 18027 9 - Ret 2 59 300 -0 384 ENST00000442898 17479 17718 9 - Spl 2 65 300 -0 384 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 385 ENST00000442898 17479 17718 9 - Spl 0 60 299 -0 385 ENST00000442898 17855 18027 9 - Spl 0 60 299 -0 386 ENST00000442898 17166 17343 9 - Spl 1 68 242 -0 386 ENST00000442898 17479 17718 9 - Spl 1 68 242 -0 387 ENST00000442898 17479 17718 9 - Ret 0 63 197 -0 387 ENST00000442898 17855 18027 9 - Spl 0 63 197 -0 388 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 388 ENST00000442898 18492 24850 9 - Ret 2 65 300 -0 389 ENST00000442898 25004 29601 9 - Ret 0 63 235 -0 390 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 390 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 391 ENST00000442898 17479 17718 9 - Spl 1 62 268 -0 391 ENST00000442898 17855 18027 9 - Spl 1 62 268 -0 392 ENST00000442898 18174 18380 9 - Spl 0 65 176 -0 393 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 393 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 394 ENST00000442898 17166 17343 9 - Spl 0 59 300 -0 394 ENST00000442898 17855 18027 9 - Spl 0 59 300 -0 395 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 395 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 396 ENST00000442898 18174 18380 9 - Spl 0 59 262 -0 396 ENST00000442898 18492 24850 9 - Ret 0 59 262 -0 397 ENST00000442898 17855 18027 9 - Spl 1 55 275 -0 397 ENST00000442898 18174 18380 9 - Spl 1 55 275 -0 398 ENST00000442898 16061 16717 9 - Spl 1 48 273 -0 399 ENST00000442898 16061 16717 9 - Spl 1 48 273 -0 400 ENST00000442898 17479 17718 9 - Spl 0 67 213 -0 401 ENST00000442898 17855 18027 9 - Spl 1 47 248 -0 401 ENST00000442898 18174 18380 9 - Spl 1 47 248 -0 402 ENST00000442898 16061 16717 9 - Ret 1 48 299 -0 403 ENST00000442898 17479 17718 9 - Spl 0 63 192 -0 403 ENST00000442898 17855 18027 9 - Spl 0 63 192 -0 404 ENST00000442898 16876 16964 9 - Spl 2 46 208 -0 405 ENST00000442898 18174 18380 9 - Spl 0 57 277 -0 405 ENST00000442898 18492 24850 9 - Ret 0 57 277 -0 406 ENST00000442898 14940 15080 9 - Spl 0 49 293 -0 407 ENST00000442898 18174 18380 9 - Spl 0 60 271 -0 407 ENST00000442898 18492 24850 9 - Ret 0 60 271 -0 408 ENST00000442898 17166 17343 9 - Spl 0 63 298 -0 408 ENST00000442898 17479 17718 9 - Spl 0 63 298 -0 408 ENST00000442898 17855 18027 9 - Spl 0 63 298 -0 409 ENST00000442898 18174 18380 9 - Spl 0 64 272 -0 409 ENST00000442898 18492 24850 9 - Ret 0 64 272 -0 410 ENST00000442898 18174 18380 9 - Spl 0 69 300 -0 410 ENST00000442898 18492 24850 9 - Ret 0 69 300 -0 411 ENST00000442898 18174 18380 9 - Spl 0 69 300 -0 411 ENST00000442898 18492 24850 9 - Ret 0 69 300 -0 412 ENST00000442898 17479 17718 9 - Spl 0 64 299 -0 412 ENST00000442898 17855 18027 9 - Spl 0 64 299 -0 413 ENST00000442898 16061 16717 9 - Ret 0 51 295 -0 414 ENST00000442898 18492 24850 9 - Spl 0 58 169 -0 415 ENST00000442898 18174 18380 9 - Spl 0 57 277 -0 415 ENST00000442898 18492 24850 9 - Ret 0 57 277 -0 416 ENST00000442898 17166 17343 9 - Spl 1 60 298 -0 416 ENST00000442898 17479 17718 9 - Spl 1 60 298 -0 416 ENST00000442898 17855 18027 9 - Spl 1 60 298 -0 417 ENST00000442898 17479 17718 9 - Spl 1 65 262 -0 417 ENST00000442898 17855 18027 9 - Spl 1 65 262 -0 418 ENST00000442898 17855 18027 9 - Spl 0 47 149 -0 419 ENST00000442898 18492 24850 9 - Ret 0 58 219 -0 420 ENST00000442898 17855 18027 9 - Spl 1 48 152 -0 421 ENST00000442898 15149 15908 9 - Spl 0 40 300 -0 422 ENST00000442898 17166 17343 9 - Spl 1 60 298 -0 422 ENST00000442898 17479 17718 9 - Spl 1 60 298 -0 422 ENST00000442898 17855 18027 9 - Spl 1 60 298 -0 423 ENST00000442898 17166 17343 9 - Spl 1 63 242 -0 423 ENST00000442898 17479 17718 9 - Spl 1 63 242 -0 424 ENST00000442898 17166 17343 9 - Spl 1 63 242 -0 424 ENST00000442898 17479 17718 9 - Spl 1 63 242 -0 425 ENST00000442898 18174 18380 9 - Spl 1 62 181 -0 426 ENST00000442898 16061 16717 9 - Ret 1 52 300 -0 427 ENST00000442898 17479 17718 9 - Ret 0 61 282 -0 427 ENST00000442898 17855 18027 9 - Spl 0 61 282 -0 428 ENST00000442898 18174 18380 9 - Spl 1 49 300 -0 429 ENST00000442898 18174 18380 9 - Ret 0 52 281 -0 430 ENST00000442898 17479 17718 9 - Spl 0 67 299 -0 430 ENST00000442898 17855 18027 9 - Spl 0 67 299 -0 431 ENST00000442898 17166 17343 9 - Spl 0 59 300 -0 431 ENST00000442898 17479 17718 9 - Spl 0 59 300 -0 431 ENST00000442898 17855 18027 9 - Spl 0 59 300 -0 432 ENST00000442898 17479 17718 9 - Spl 2 65 300 -0 432 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 433 ENST00000442898 17479 17718 9 - Spl 2 65 300 -0 433 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 434 ENST00000442898 18492 24850 9 - Spl 0 58 169 -0 435 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 435 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 436 ENST00000442898 17855 18027 9 - Ret 2 36 300 -0 437 ENST00000442898 14940 15080 9 - Spl 0 49 293 -0 438 ENST00000442898 14940 15080 9 - Spl 0 49 293 -0 439 ENST00000442898 16061 16717 9 - Ret 1 36 220 -0 440 ENST00000442898 17855 18027 9 - Spl 1 47 248 -0 440 ENST00000442898 18174 18380 9 - Spl 1 47 248 -0 441 ENST00000442898 18492 24850 9 - Ret 0 59 214 -0 442 ENST00000442898 17479 17718 9 - Ret 0 45 213 -0 442 ENST00000442898 17855 18027 9 - Ret 0 45 213 -0 443 ENST00000442898 17479 17718 9 - Spl 1 62 298 -0 443 ENST00000442898 18174 18380 9 - Spl 1 62 298 -0 444 ENST00000442898 18174 18380 9 - Ret 0 67 297 -0 445 ENST00000442898 17479 17718 9 - Ret 0 61 282 -0 445 ENST00000442898 17855 18027 9 - Spl 0 61 282 -0 446 ENST00000442898 18174 18380 9 - Spl 0 63 272 -0 446 ENST00000442898 18492 24850 9 - Ret 0 63 272 -0 447 ENST00000442898 17479 17718 9 - Spl 2 65 300 -0 447 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 448 ENST00000442898 17166 17343 9 - Spl 0 68 293 -0 448 ENST00000442898 17479 17718 9 - Spl 0 68 293 -0 449 ENST00000442898 14940 15080 9 - Spl 0 49 208 -0 450 ENST00000442898 18174 18380 9 - Ret 0 67 297 -0 451 ENST00000442898 17855 18027 9 - Spl 0 48 125 -0 452 ENST00000442898 17166 17343 9 - Spl 0 59 300 -0 452 ENST00000442898 17479 17718 9 - Spl 0 59 300 -0 452 ENST00000442898 17855 18027 9 - Spl 0 59 300 -0 453 ENST00000442898 17479 17718 9 - Spl 0 60 299 -0 453 ENST00000442898 17855 18027 9 - Spl 0 60 299 -0 454 ENST00000442898 17855 18027 9 - Spl 0 53 300 -0 454 ENST00000442898 18492 24850 9 - Spl 0 53 300 -0 455 ENST00000442898 17855 18027 9 - Spl 0 35 300 -0 456 ENST00000442898 17855 18027 9 - Spl 0 39 117 -0 457 ENST00000442898 17855 18027 9 - Spl 0 48 300 -0 457 ENST00000442898 18174 18380 9 - Ret 0 48 300 -0 458 ENST00000442898 17855 18027 9 - Spl 0 48 300 -0 458 ENST00000442898 18174 18380 9 - Ret 0 48 300 -0 459 ENST00000442898 17855 18027 9 - Spl 0 35 300 -0 460 ENST00000442898 17855 18027 9 - Spl 0 53 300 -0 460 ENST00000442898 18492 24850 9 - Spl 0 53 300 -0 461 ENST00000442898 25004 29601 9 - Ret 0 63 235 -0 462 ENST00000442898 16876 16964 9 - Spl 2 46 208 -0 463 ENST00000442898 17855 18027 9 - Spl 1 47 248 -0 463 ENST00000442898 18174 18380 9 - Spl 1 47 248 -0 464 ENST00000442898 17479 17718 9 - Spl 0 67 213 -0 465 ENST00000442898 18174 18380 9 - Spl 0 69 300 -0 465 ENST00000442898 18492 24850 9 - Ret 0 69 300 -0 466 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 466 ENST00000442898 18492 24850 9 - Ret 2 65 300 -0 467 ENST00000442898 16061 16717 9 - Spl 1 49 289 -0 467 ENST00000442898 16876 16964 9 - Spl 1 49 289 -0 468 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 468 ENST00000442898 17479 17718 9 - Spl 0 63 300 -0 468 ENST00000442898 17855 18027 9 - Spl 0 63 300 -0 469 ENST00000442898 17855 18027 9 - Spl 1 55 275 -0 469 ENST00000442898 18174 18380 9 - Spl 1 55 275 -0 470 ENST00000442898 17166 17343 9 - Spl 1 62 221 -0 470 ENST00000442898 17479 17718 9 - Spl 1 62 221 -0 471 ENST00000442898 18492 24850 9 - Ret 0 51 225 -0 472 ENST00000442898 17855 18027 9 - Ret 2 45 147 -0 473 ENST00000442898 16061 16717 9 - Ret 1 52 300 -0 474 ENST00000442898 18174 18380 9 - Spl 0 54 300 -0 474 ENST00000442898 18492 24850 9 - Ret 0 54 300 -0 475 ENST00000442898 18492 24850 9 - Ret 0 51 230 -0 476 ENST00000442898 18492 24850 9 - Ret 0 51 222 -0 477 ENST00000442898 18174 18380 9 - Ret 2 41 288 -0 478 ENST00000442898 18492 24850 9 - Ret 0 60 292 -0 479 ENST00000442898 16061 16717 9 - Ret 0 51 295 -0 480 ENST00000442898 15149 15908 9 - Spl 0 38 268 -0 480 ENST00000442898 16061 16717 9 - Ret 0 38 268 -0 481 ENST00000442898 14940 15080 9 - Spl 0 49 208 -0 482 ENST00000442898 18492 24850 9 - Ret 0 58 219 -0 483 ENST00000442898 18492 24850 9 - Ret 0 58 219 -0 484 ENST00000442898 14940 15080 9 - Ret 1 54 233 -0 484 ENST00000442898 16876 16964 9 - Ret 1 54 233 -0 484 ENST00000442898 18492 24850 9 - Ret 1 54 233 -0 485 ENST00000442898 17479 17718 9 - Spl 0 62 293 -0 485 ENST00000442898 17855 18027 9 - Spl 0 62 293 -0 486 ENST00000442898 18174 18380 9 - Spl 1 57 299 -0 486 ENST00000442898 18492 24850 9 - Ret 1 57 299 -0 487 ENST00000442898 17166 17343 9 - Spl 0 66 213 -0 487 ENST00000442898 17479 17718 9 - Spl 0 66 213 -0 488 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 488 ENST00000442898 18492 24850 9 - Ret 2 65 300 -0 489 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 489 ENST00000442898 18492 24850 9 - Ret 2 65 300 -0 490 ENST00000442898 16061 16717 9 - Ret 0 51 295 -0 491 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 491 ENST00000442898 17479 17718 9 - Spl 0 63 300 -0 491 ENST00000442898 17855 18027 9 - Spl 0 63 300 -0 492 ENST00000442898 17479 17718 9 - Spl 0 64 270 -0 492 ENST00000442898 17855 18027 9 - Spl 0 64 270 -0 493 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 493 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 494 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 494 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 495 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 495 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 496 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 497 ENST00000442898 17479 17718 9 - Spl 2 61 193 -0 497 ENST00000442898 17855 18027 9 - Spl 2 61 193 -0 498 ENST00000442898 17479 17718 9 - Spl 0 60 292 -0 498 ENST00000442898 17855 18027 9 - Spl 0 60 292 -0 499 ENST00000442898 17166 17343 9 - Spl 0 63 298 -0 499 ENST00000442898 17479 17718 9 - Spl 0 63 298 -0 499 ENST00000442898 17855 18027 9 - Spl 0 63 298 -0 500 ENST00000442898 17479 17718 9 - Spl 1 65 262 -0 500 ENST00000442898 17855 18027 9 - Spl 1 65 262 -0 501 ENST00000442898 17855 18027 9 - Spl 1 43 123 -0 502 ENST00000442898 17479 17718 9 - Spl 2 70 208 -0 503 ENST00000442898 17855 18027 9 - Spl 0 51 300 -0 503 ENST00000442898 18174 18380 9 - Spl 0 51 300 -0 504 ENST00000442898 17479 17718 9 - Spl 0 60 299 -0 504 ENST00000442898 17855 18027 9 - Spl 0 60 299 -0 505 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 505 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 506 ENST00000442898 17855 18027 9 - Spl 0 48 300 -0 506 ENST00000442898 18174 18380 9 - Ret 0 48 300 -0 507 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 507 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 508 ENST00000442898 17479 17718 9 - Spl 0 62 300 -0 508 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 509 ENST00000442898 17479 17718 9 - Spl 0 62 300 -0 509 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 510 ENST00000442898 17855 18027 9 - Spl 0 53 300 -0 510 ENST00000442898 18492 24850 9 - Spl 0 53 300 -0 511 ENST00000442898 17855 18027 9 - Spl 0 51 300 -0 511 ENST00000442898 18174 18380 9 - Spl 0 51 300 -0 512 ENST00000442898 17479 17718 9 - Spl 0 62 300 -0 512 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 513 ENST00000442898 18492 24850 9 - Ret 0 51 220 -0 514 ENST00000442898 17479 17718 9 - Spl 0 64 299 -0 514 ENST00000442898 17855 18027 9 - Spl 0 64 299 -0 515 ENST00000442898 17855 18027 9 - Spl 1 50 155 -0 516 ENST00000442898 17479 17718 9 - Spl 0 62 293 -0 516 ENST00000442898 17855 18027 9 - Spl 0 62 293 -0 517 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 518 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 519 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 520 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 520 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 521 ENST00000442898 17479 17718 9 - Spl 0 64 270 -0 521 ENST00000442898 17855 18027 9 - Spl 0 64 270 -0 522 ENST00000442898 16061 16717 9 - Spl 1 48 273 -0 523 ENST00000442898 16061 16717 9 - Ret 1 36 220 -0 524 ENST00000442898 17166 17343 9 - Spl 0 63 300 -0 524 ENST00000442898 17479 17718 9 - Spl 0 63 300 -0 524 ENST00000442898 17855 18027 9 - Spl 0 63 300 -0 525 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 525 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 526 ENST00000442898 17479 17718 9 - Spl 0 64 270 -0 526 ENST00000442898 17855 18027 9 - Spl 0 64 270 -0 527 ENST00000442898 17855 18027 9 - Spl 0 52 222 -0 527 ENST00000442898 18174 18380 9 - Spl 0 52 222 -0 528 ENST00000442898 17479 17718 9 - Spl 0 64 299 -0 528 ENST00000442898 17855 18027 9 - Spl 0 64 299 -0 529 ENST00000442898 17166 17343 9 - Spl 0 64 193 -0 529 ENST00000442898 17479 17718 9 - Spl 0 64 193 -0 530 ENST00000442898 17166 17343 9 - Spl 0 65 218 -0 530 ENST00000442898 17479 17718 9 - Spl 0 65 218 -0 531 ENST00000442898 17166 17343 9 - Spl 1 63 285 -0 531 ENST00000442898 17479 17718 9 - Spl 1 63 285 -0 532 ENST00000442898 17855 18027 9 - Spl 0 35 300 -0 533 ENST00000442898 17479 17718 9 - Spl 0 67 213 -0 534 ENST00000442898 18174 18380 9 - Spl 0 60 256 -0 534 ENST00000442898 18492 24850 9 - Spl 0 60 256 -0 535 ENST00000442898 18174 18380 9 - Spl 0 60 256 -0 535 ENST00000442898 18492 24850 9 - Spl 0 60 256 -0 536 ENST00000442898 18174 18380 9 - Spl 0 60 256 -0 536 ENST00000442898 18492 24850 9 - Spl 0 60 256 -0 537 ENST00000442898 17166 17343 9 - Spl 0 63 298 -0 537 ENST00000442898 17479 17718 9 - Spl 0 63 298 -0 537 ENST00000442898 17855 18027 9 - Spl 0 63 298 -0 538 ENST00000442898 17166 17343 9 - Spl 1 65 267 -0 538 ENST00000442898 17479 17718 9 - Spl 1 65 267 -0 539 ENST00000442898 18174 18380 9 - Spl 0 69 300 -0 539 ENST00000442898 18492 24850 9 - Ret 0 69 300 -0 540 ENST00000442898 18492 24850 9 - Spl 0 58 169 -0 541 ENST00000442898 18174 18380 9 - Spl 0 59 262 -0 541 ENST00000442898 18492 24850 9 - Ret 0 59 262 -0 542 ENST00000442898 18174 18380 9 - Spl 0 59 262 -0 542 ENST00000442898 18492 24850 9 - Ret 0 59 262 -0 543 ENST00000442898 18174 18380 9 - Spl 0 59 262 -0 543 ENST00000442898 18492 24850 9 - Ret 0 59 262 -0 544 ENST00000442898 17855 18027 9 - Spl 0 35 300 -0 545 ENST00000442898 17855 18027 9 - Spl 0 35 300 -0 546 ENST00000442898 17166 17343 9 - Spl 0 59 300 -0 546 ENST00000442898 17479 17718 9 - Spl 0 59 300 -0 546 ENST00000442898 17855 18027 9 - Spl 0 59 300 -0 547 ENST00000442898 18492 24850 9 - Ret 1 60 292 -0 548 ENST00000442898 18492 24850 9 - Ret 0 60 292 -0 549 ENST00000442898 18492 24850 9 - Ret 1 57 216 -0 550 ENST00000442898 17855 18027 9 - Spl 2 60 163 -0 551 ENST00000442898 14940 15080 9 - Spl 0 48 267 -0 552 ENST00000442898 17166 17343 9 - Spl 1 63 242 -0 552 ENST00000442898 17479 17718 9 - Spl 1 63 242 -0 553 ENST00000442898 17855 18027 9 - Spl 0 51 300 -0 553 ENST00000442898 18174 18380 9 - Spl 0 51 300 -0 554 ENST00000442898 18174 18380 9 - Spl 2 65 300 -0 554 ENST00000442898 18492 24850 9 - Ret 2 65 300 -0 555 ENST00000442898 17166 17343 9 - Spl 0 59 300 -0 555 ENST00000442898 17855 18027 9 - Spl 0 59 300 -0 556 ENST00000442898 17479 17718 9 - Spl 0 62 300 -0 556 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 557 ENST00000442898 17855 18027 9 - Spl 0 53 300 -0 557 ENST00000442898 18492 24850 9 - Spl 0 53 300 -0 558 ENST00000442898 17855 18027 9 - Spl 0 53 300 -0 558 ENST00000442898 18492 24850 9 - Spl 0 53 300 -0 559 ENST00000442898 18174 18380 9 - Spl 0 57 143 -0 560 ENST00000442898 17166 17343 9 - Spl 0 59 300 -0 560 ENST00000442898 17479 17718 9 - Spl 0 59 300 -0 560 ENST00000442898 17855 18027 9 - Spl 0 59 300 -0 561 ENST00000442898 17166 17343 9 - Spl 0 59 300 -0 561 ENST00000442898 17479 17718 9 - Spl 0 59 300 -0 561 ENST00000442898 17855 18027 9 - Spl 0 59 300 -0 562 ENST00000442898 17855 18027 9 - Ret 2 36 300 -0 563 ENST00000442898 17479 17718 9 - Ret 0 61 282 -0 563 ENST00000442898 17855 18027 9 - Spl 0 61 282 -0 564 ENST00000442898 17479 17718 9 - Ret 0 61 282 -0 564 ENST00000442898 17855 18027 9 - Spl 0 61 282 -0 565 ENST00000442898 18174 18380 9 - Ret 2 56 284 -0 565 ENST00000442898 18492 24850 9 - Ret 2 56 284 -0 566 ENST00000442898 17855 18027 9 - Spl 0 51 300 -0 566 ENST00000442898 18174 18380 9 - Spl 0 51 300 -0 567 ENST00000442898 17855 18027 9 - Spl 0 51 219 -0 568 ENST00000442898 17166 17343 9 - Spl 0 68 293 -0 568 ENST00000442898 17479 17718 9 - Spl 0 68 293 -0 569 ENST00000442898 25004 29601 9 - Ret 0 63 235 -0 570 ENST00000442898 17479 17718 9 - Spl 0 62 202 -0 570 ENST00000442898 17855 18027 9 - Spl 0 62 202 -0 571 ENST00000442898 18174 18380 9 - Ret 2 41 288 -0 572 ENST00000442898 17166 17343 9 - Spl 1 63 242 -0 572 ENST00000442898 17479 17718 9 - Spl 1 63 242 -0 573 ENST00000442898 17166 17343 9 - Spl 0 63 298 -0 573 ENST00000442898 17479 17718 9 - Spl 0 63 298 -0 573 ENST00000442898 17855 18027 9 - Spl 0 63 298 -0 574 ENST00000442898 18174 18380 9 - Spl 0 60 256 -0 574 ENST00000442898 18492 24850 9 - Spl 0 60 256 -0 575 ENST00000442898 18174 18380 9 - Spl 1 49 300 -0 576 ENST00000442898 16061 16717 9 - Ret 1 52 300 -0 577 ENST00000442898 18174 18380 9 - Spl 0 60 256 -0 577 ENST00000442898 18492 24850 9 - Spl 0 60 256 -0 578 ENST00000442898 17855 18027 9 - Spl 1 53 300 -0 578 ENST00000442898 18492 24850 9 - Spl 1 53 300 -0 579 ENST00000442898 17855 18027 9 - Spl 1 47 248 -0 579 ENST00000442898 18174 18380 9 - Spl 1 47 248 -0 580 ENST00000442898 17855 18027 9 - Spl 1 47 248 -0 580 ENST00000442898 18174 18380 9 - Spl 1 47 248 -0 581 ENST00000442898 18174 18380 9 - Spl 0 54 300 -0 581 ENST00000442898 18492 24850 9 - Ret 0 54 300 -0 582 ENST00000442898 18174 18380 9 - Spl 0 54 300 -0 582 ENST00000442898 18492 24850 9 - Ret 0 54 300 -0 583 ENST00000442898 16061 16717 9 - Spl 1 48 273 -0 584 ENST00000442898 17166 17343 9 - Spl 1 60 298 -0 584 ENST00000442898 17479 17718 9 - Spl 1 60 298 -0 584 ENST00000442898 17855 18027 9 - Spl 1 60 298 -0 585 ENST00000442898 18492 24850 9 - Spl 0 58 169 -0 586 ENST00000442898 17855 18027 9 - Spl 0 48 300 -0 586 ENST00000442898 18174 18380 9 - Ret 0 48 300 -0 587 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 587 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 588 ENST00000442898 15149 15908 9 - Spl 0 38 268 -0 588 ENST00000442898 16061 16717 9 - Ret 0 38 268 -0 589 ENST00000442898 17479 17718 9 - Spl 1 65 300 -0 589 ENST00000442898 17855 18027 9 - Spl 1 65 300 -0 590 ENST00000442898 17479 17718 9 - Ret 0 45 213 -0 590 ENST00000442898 17855 18027 9 - Ret 0 45 213 -0 591 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 591 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 592 ENST00000442898 17166 17343 9 - Spl 0 62 298 -0 592 ENST00000442898 17855 18027 9 - Spl 0 62 298 -0 593 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 593 ENST00000442898 18174 18380 9 - Spl 0 66 300 -0 594 ENST00000442898 17479 17718 9 - Spl 0 60 299 -0 594 ENST00000442898 17855 18027 9 - Spl 0 60 299 -0 595 ENST00000442898 17479 17718 9 - Spl 0 62 300 -0 595 ENST00000442898 17855 18027 9 - Spl 0 62 300 -0 596 ENST00000442898 18492 24850 9 - Ret 0 45 118 -0 597 ENST00000442898 17479 17718 9 - Ret 2 59 300 -0 597 ENST00000442898 17855 18027 9 - Ret 2 59 300 -0 598 ENST00000442898 17166 17343 9 - Spl 1 68 242 -0 598 ENST00000442898 17479 17718 9 - Spl 1 68 242 -0 599 ENST00000442898 16061 16717 9 - Ret 0 51 295 -0 600 ENST00000442898 16061 16717 9 - Ret 0 51 295 -0 601 ENST00000442898 17166 17343 9 - Spl 0 62 300 -0 601 ENST00000442898 17479 17718 9 - Spl 0 62 300 -0 602 ENST00000442898 17166 17343 9 - Spl 0 68 293 -0 602 ENST00000442898 17479 17718 9 - Spl 0 68 293 -0 603 ENST00000442898 18174 18380 9 - Spl 1 60 256 -0 603 ENST00000442898 18492 24850 9 - Spl 1 60 256 -0 604 ENST00000442898 17166 17343 9 - Spl 0 60 300 -0 604 ENST00000442898 17479 17718 9 - Spl 0 60 300 -0 604 ENST00000442898 17855 18027 9 - Spl 0 60 300 -0 605 ENST00000442898 17166 17343 9 - Spl 0 60 300 -0 605 ENST00000442898 17479 17718 9 - Spl 0 60 300 -0 605 ENST00000442898 17855 18027 9 - Spl 0 60 300 -0 606 ENST00000442898 18174 18380 9 - Ret 1 56 284 -0 606 ENST00000442898 18492 24850 9 - Ret 1 56 284 -0 607 ENST00000442898 17479 17718 9 - Ret 0 63 197 -0 607 ENST00000442898 17855 18027 9 - Spl 0 63 197 -0 608 ENST00000442898 17479 17718 9 - Spl 0 64 270 -0 608 ENST00000442898 17855 18027 9 - Spl 0 64 270 -0 609 ENST00000442898 16061 16717 9 - Ret 0 51 295 -0 610 ENST00000442898 16061 16717 9 - Ret 0 51 295 -0 611 ENST00000442898 18174 18380 9 - Spl 1 57 299 -0 611 ENST00000442898 18492 24850 9 - Ret 1 57 299 -0 612 ENST00000442898 16061 16717 9 - Ret 0 68 300 -0 613 ENST00000442898 17166 17343 9 - Spl 0 65 218 -0 613 ENST00000442898 17479 17718 9 - Spl 0 65 218 -0 614 ENST00000442898 14940 15080 9 - Spl 0 48 267 -0 615 ENST00000442898 17166 17343 9 - Spl 1 65 267 -0 615 ENST00000442898 17479 17718 9 - Spl 1 65 267 -0 616 ENST00000442898 18492 24850 9 - Ret 0 60 292 -0 617 ENST00000442898 18492 24850 9 - Ret 0 60 292 -0 618 ENST00000442898 18174 18380 9 - Ret 0 67 297 -0 619 ENST00000442898 18492 24850 9 - Ret 0 60 292 -0 620 ENST00000442898 18174 18380 9 - Spl 0 59 262 -0 620 ENST00000442898 18492 24850 9 - Ret 0 59 262 -0 621 ENST00000442898 18174 18380 9 - Ret 0 52 281 -0 622 ENST00000442898 17479 17718 9 - Spl 0 63 192 -0 622 ENST00000442898 17855 18027 9 - Spl 0 63 192 -0 623 ENST00000442898 17479 17718 9 - Spl 0 60 292 -0 623 ENST00000442898 17855 18027 9 - Spl 0 60 292 -0 624 ENST00000442898 17479 17718 9 - Ret 0 45 213 -0 624 ENST00000442898 17855 18027 9 - Ret 0 45 213 -0 625 ENST00000442898 18174 18380 9 - Ret 0 52 281 -0 626 ENST00000442898 17166 17343 9 - Spl 0 63 298 -0 626 ENST00000442898 17479 17718 9 - Spl 0 63 298 -0 626 ENST00000442898 17855 18027 9 - Spl 0 63 298 -0 627 ENST00000442898 25004 29601 9 - Ret 0 63 235 -0 628 ENST00000442898 17855 18027 9 - Spl 0 48 300 -0 628 ENST00000442898 18174 18380 9 - Ret 0 48 300 -0 629 ENST00000442898 17479 17718 9 - Spl 1 65 251 -0 629 ENST00000442898 17855 18027 9 - Spl 1 65 251 -0 630 ENST00000442898 18174 18380 9 - Spl 0 60 271 -0 630 ENST00000442898 18492 24850 9 - Ret 0 60 271 -0 631 ENST00000442898 18492 24850 9 - Spl 0 57 153 -0 632 ENST00000442898 18492 24850 9 - Ret 0 59 214 -0 633 ENST00000442898 17479 17718 9 - Ret 0 61 282 -0 633 ENST00000442898 17855 18027 9 - Spl 0 61 282 -0 634 ENST00000442898 17479 17718 9 - Ret 0 61 282 -0 634 ENST00000442898 17855 18027 9 - Spl 0 61 282 -0 635 ENST00000442898 17479 17718 9 - Spl 1 65 262 -0 635 ENST00000442898 17855 18027 9 - Spl 1 65 262 -0 636 ENST00000442898 17479 17718 9 - Spl 0 62 293 -0 636 ENST00000442898 17855 18027 9 - Spl 0 62 293 -0 637 ENST00000442898 18174 18380 9 - Spl 0 59 262 -0 637 ENST00000442898 18492 24850 9 - Ret 0 59 262 -0 638 ENST00000442898 18492 24850 9 - Ret 0 60 292 -0 639 ENST00000442898 17166 17343 9 - Spl 0 63 285 -0 639 ENST00000442898 17479 17718 9 - Spl 0 63 285 -0 640 ENST00000442898 15149 15908 9 - Spl 0 40 132 -0 641 ENST00000442898 18174 18380 9 - Spl 0 64 272 -0 641 ENST00000442898 18492 24850 9 - Ret 0 64 272 -0 642 ENST00000442898 17479 17718 9 - Ret 2 59 300 -0 642 ENST00000442898 17855 18027 9 - Ret 2 59 300 -0 643 ENST00000442898 17479 17718 9 - Spl 0 67 299 -0 643 ENST00000442898 17855 18027 9 - Spl 0 67 299 -0 644 ENST00000442898 18492 24850 9 - Ret 1 57 216 -0 645 ENST00000442898 17166 17343 9 - Spl 1 68 242 -0 645 ENST00000442898 17479 17718 9 - Spl 1 68 242 -0 646 ENST00000442898 17479 17718 9 - Ret 0 61 282 -0 646 ENST00000442898 17855 18027 9 - Spl 0 61 282 -0 647 ENST00000442898 17479 17718 9 - Ret 0 61 282 -0 647 ENST00000442898 17855 18027 9 - Spl 0 61 282 -0 648 ENST00000442898 18174 18380 9 - Spl 1 57 299 -0 648 ENST00000442898 18492 24850 9 - Ret 1 57 299 -0 649 ENST00000442898 17855 18027 9 - Ret 2 36 300 -0 650 ENST00000442898 17479 17718 9 - Spl 0 63 192 -0 650 ENST00000442898 17855 18027 9 - Spl 0 63 192 -0 651 ENST00000442898 17855 18027 9 - Spl 0 35 300 -0 652 ENST00000442898 18174 18380 9 - Spl 0 57 277 -0 652 ENST00000442898 18492 24850 9 - Ret 0 57 277 +0 197 ENST00000442898 18492 24850 9 - Spl 0 65 176 +0 198 ENST00000442898 16876 16964 9 - Spl 0 46 270 +0 199 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 199 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 200 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 201 ENST00000442898 16061 16717 9 - Ret 0 49 177 +0 202 ENST00000442898 17479 17718 9 - Spl 0 63 194 +0 203 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 203 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 204 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 204 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 205 ENST00000442898 16876 16964 9 - Spl 0 46 270 +0 206 ENST00000442898 16876 16964 9 - Spl 0 46 270 +0 207 ENST00000442898 16876 16964 9 - Spl 0 46 270 +0 208 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 208 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 209 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 209 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 210 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 210 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 211 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 211 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 212 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 212 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 213 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 213 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 214 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 214 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 215 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 215 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 216 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 217 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 218 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 218 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 219 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 219 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 220 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 221 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 221 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 222 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 222 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 223 ENST00000442898 17479 17718 9 - Spl 0 63 194 +0 224 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 224 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 225 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 225 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 226 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 227 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 228 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 229 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 229 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 230 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 231 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 232 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 233 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 234 ENST00000442898 17855 18027 9 - Spl 1 50 221 +0 234 ENST00000442898 18174 18380 9 - Spl 1 50 221 +0 235 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 235 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 236 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 236 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 237 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 237 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 238 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 238 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 239 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 239 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 240 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 240 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 241 ENST00000442898 18174 18380 9 - Spl 0 65 176 +0 241 ENST00000442898 18492 24850 9 - Spl 0 65 176 +0 242 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 242 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 243 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 244 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 244 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 245 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 246 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 247 ENST00000442898 17479 17718 9 - Spl 0 63 194 +0 248 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 248 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 249 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 250 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 250 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 251 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 251 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 252 ENST00000442898 17479 17718 9 - Spl 0 63 194 +0 253 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 254 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 255 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 256 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 256 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 257 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 257 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 258 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 258 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 259 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 259 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 260 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 260 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 261 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 261 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 262 ENST00000442898 17166 17343 9 - Spl 0 63 277 +0 262 ENST00000442898 17479 17718 9 - Spl 0 63 277 +0 263 ENST00000442898 18174 18380 9 - Spl 0 65 176 +0 263 ENST00000442898 18492 24850 9 - Spl 0 65 176 +0 264 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 264 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 265 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 265 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 266 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 266 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 267 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 267 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 268 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 269 ENST00000442898 17479 17718 9 - Spl 0 63 194 +0 270 ENST00000442898 18492 24850 9 - Ret 1 66 260 +0 271 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 271 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 272 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 272 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 273 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 273 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 274 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 274 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 275 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 275 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 276 ENST00000442898 16876 16964 9 - Spl 0 46 270 +0 277 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 277 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 278 ENST00000442898 16876 16964 9 - Spl 0 46 270 +0 279 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 279 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 280 ENST00000442898 16061 16717 9 - Ret 0 48 248 +0 281 ENST00000442898 16061 16717 9 - Ret 0 48 248 +0 282 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 282 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 283 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 284 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 284 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 285 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 285 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 286 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 287 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 287 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 288 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 289 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 290 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 290 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 291 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 291 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 292 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 292 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 293 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 293 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 294 ENST00000442898 16876 16964 9 - Spl 0 46 270 +0 295 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 296 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 296 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 297 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 297 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 298 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 298 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 299 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 300 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 300 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 301 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 301 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 302 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 302 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 303 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 304 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 304 ENST00000442898 17855 18027 9 - Spl 0 66 300 +0 305 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 306 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 306 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 307 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 307 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 308 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 308 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 309 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 309 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 310 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 311 ENST00000442898 18174 18380 9 - Spl 0 65 176 +0 311 ENST00000442898 18492 24850 9 - Spl 0 65 176 +0 312 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 312 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 313 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 313 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 314 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 314 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 315 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 315 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 316 ENST00000442898 18174 18380 9 - Spl 0 57 300 +0 317 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 317 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 318 ENST00000442898 17479 17718 9 - Spl 0 65 300 +0 318 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 319 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 319 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 320 ENST00000442898 17166 17343 9 - Spl 0 64 277 +0 320 ENST00000442898 17479 17718 9 - Spl 0 64 277 +0 321 ENST00000442898 16876 16964 9 - Spl 0 46 270 +0 322 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 322 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 323 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 323 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 324 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 324 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 325 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 325 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 326 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 326 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 327 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 327 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 328 ENST00000442898 14940 15080 9 - Spl 0 52 134 +0 329 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 329 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 330 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 330 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 331 ENST00000442898 16061 16717 9 - Ret 0 48 249 +0 332 ENST00000442898 17479 17718 9 - Spl 0 62 288 +0 332 ENST00000442898 17855 18027 9 - Spl 0 62 288 +0 333 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 333 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 334 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 334 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 335 ENST00000442898 18174 18380 9 - Spl 0 59 227 +0 335 ENST00000442898 18492 24850 9 - Spl 0 59 227 +0 336 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 336 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 337 ENST00000442898 17479 17718 9 - Spl 1 62 288 +0 337 ENST00000442898 17855 18027 9 - Spl 1 62 288 +0 338 ENST00000442898 16876 16964 9 - Spl 0 47 270 +0 339 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 339 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 340 ENST00000442898 16061 16717 9 - Ret 0 49 177 +0 341 ENST00000442898 17479 17718 9 - Spl 0 65 234 +0 341 ENST00000442898 17855 18027 9 - Spl 0 65 234 +0 342 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 342 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 343 ENST00000442898 18492 24850 9 - Ret 0 66 260 +0 344 ENST00000442898 18174 18380 9 - Spl 0 65 176 +0 344 ENST00000442898 18492 24850 9 - Spl 0 65 176 +0 345 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 345 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 346 ENST00000442898 17855 18027 9 - Spl 0 50 221 +0 346 ENST00000442898 18174 18380 9 - Spl 0 50 221 +0 347 ENST00000442898 16876 16964 9 - Spl 0 46 270 +0 348 ENST00000442898 17855 18027 9 - Spl 0 45 203 +0 348 ENST00000442898 18174 18380 9 - Spl 0 45 203 +0 349 ENST00000442898 17479 17718 9 - Spl 0 58 166 +0 349 ENST00000442898 17855 18027 9 - Spl 0 58 166 diff --git a/tests/_regtest_outputs/test_all_introns_counts_and_info.test_main[file_2].out b/tests/_regtest_outputs/test_all_introns_counts_and_info.test_main[file_2].out index baf5fc3..509b96d 100644 --- a/tests/_regtest_outputs/test_all_introns_counts_and_info.test_main[file_2].out +++ b/tests/_regtest_outputs/test_all_introns_counts_and_info.test_main[file_2].out @@ -1,578 +1,1120 @@ read_uid transcript_id start end chr strand assignment conversions convertible coverage -0 1 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 2 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 2 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 3 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 3 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 4 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 4 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 5 ENST00000442898 16876 16964 9 - Spl 0 46 270 -0 6 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 6 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 7 ENST00000442898 16061 16717 9 - Ret 0 49 177 -0 8 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 8 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 9 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 9 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 10 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 10 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 11 ENST00000442898 18174 18380 9 - Spl 0 65 176 -0 11 ENST00000442898 18492 24850 9 - Spl 0 65 176 -0 12 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 13 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 13 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 14 ENST00000442898 17479 17718 9 - Spl 0 66 299 -0 14 ENST00000442898 17855 18027 9 - Spl 0 66 299 -0 15 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 16 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 16 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 17 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 17 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 18 ENST00000442898 18174 18380 9 - Spl 0 65 176 -0 18 ENST00000442898 18492 24850 9 - Spl 0 65 176 -0 19 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 20 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 20 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 21 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 21 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 22 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 22 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 23 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 23 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 24 ENST00000442898 18174 18380 9 - Spl 0 65 176 -0 24 ENST00000442898 18492 24850 9 - Spl 0 65 176 -0 25 ENST00000442898 18174 18380 9 - Spl 0 65 176 -0 25 ENST00000442898 18492 24850 9 - Spl 0 65 176 -0 26 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 27 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 28 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 28 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 29 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 29 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 30 ENST00000442898 17855 18027 9 - Spl 1 50 221 -0 30 ENST00000442898 18174 18380 9 - Spl 1 50 221 -0 31 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 32 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 32 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 33 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 33 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 34 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 34 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 35 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 35 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 36 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 36 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 37 ENST00000442898 17479 17718 9 - Spl 0 58 166 -0 37 ENST00000442898 17855 18027 9 - Spl 0 58 166 -0 38 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 39 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 39 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 40 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 40 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 41 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 41 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 42 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 43 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 44 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 44 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 45 ENST00000442898 17479 17718 9 - Spl 1 63 194 -0 46 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 46 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 47 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 47 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 48 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 49 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 49 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 50 ENST00000442898 14940 15080 9 - Spl 0 52 134 -0 51 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 51 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 52 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 52 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 53 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 54 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 54 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 55 ENST00000442898 16876 16964 9 - Spl 0 46 270 -0 56 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 56 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 57 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 57 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 58 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 59 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 60 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 60 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 61 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 62 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 62 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 63 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 63 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 64 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 64 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 65 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 66 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 66 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 67 ENST00000442898 17479 17718 9 - Spl 0 63 194 -0 68 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 68 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 69 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 70 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 70 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 71 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 72 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 73 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 73 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 74 ENST00000442898 16876 16964 9 - Spl 0 46 270 -0 75 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 75 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 76 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 76 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 77 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 77 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 78 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 79 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 79 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 80 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 80 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 81 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 82 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 83 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 83 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 84 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 84 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 85 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 85 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 86 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 87 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 87 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 88 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 88 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 89 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 89 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 90 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 90 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 91 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 92 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 93 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 93 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 94 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 94 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 95 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 95 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 96 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 97 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 98 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 99 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 99 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 100 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 101 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 101 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 102 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 102 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 103 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 103 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 104 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 105 ENST00000442898 17479 17718 9 - Spl 0 63 194 -0 106 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 106 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 107 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 107 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 108 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 109 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 110 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 111 ENST00000442898 17166 17343 9 - Spl 0 57 125 -0 112 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 112 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 113 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 114 ENST00000442898 17479 17718 9 - Spl 0 58 166 -0 114 ENST00000442898 17855 18027 9 - Spl 0 58 166 -0 115 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 116 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 117 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 117 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 118 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 118 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 119 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 119 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 120 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 121 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 121 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 122 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 122 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 123 ENST00000442898 16876 16964 9 - Spl 0 46 270 -0 124 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 124 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 125 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 125 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 126 ENST00000442898 16061 16717 9 - Ret 0 49 177 -0 127 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 127 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 128 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 129 ENST00000442898 18174 18380 9 - Spl 1 59 227 -0 129 ENST00000442898 18492 24850 9 - Spl 1 59 227 -0 130 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 131 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 131 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 132 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 132 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 133 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 133 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 134 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 135 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 136 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 136 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 137 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 138 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 139 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 140 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 140 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 141 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 142 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 142 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 143 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 143 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 144 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 144 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 145 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 145 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 146 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 146 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 147 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 148 ENST00000442898 17479 17718 9 - Spl 1 65 234 -0 148 ENST00000442898 17855 18027 9 - Spl 1 65 234 -0 149 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 150 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 150 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 151 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 152 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 152 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 153 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 153 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 154 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 154 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 155 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 155 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 156 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 156 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 157 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 157 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 158 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 159 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 160 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 160 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 161 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 161 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 162 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 163 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 163 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 164 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 164 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 165 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 165 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 166 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 166 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 167 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 167 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 168 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 168 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 169 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 170 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 171 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 171 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 172 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 173 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 173 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 174 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 174 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 175 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 175 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 176 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 176 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 177 ENST00000442898 17479 17718 9 - Spl 1 65 300 -0 177 ENST00000442898 18174 18380 9 - Spl 1 65 300 -0 178 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 178 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 179 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 179 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 180 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 180 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 181 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 181 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 182 ENST00000442898 17479 17718 9 - Spl 0 58 166 -0 182 ENST00000442898 17855 18027 9 - Spl 0 58 166 -0 183 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 183 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 184 ENST00000442898 16061 16717 9 - Ret 0 49 177 -0 185 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 186 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 186 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 187 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 187 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 188 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 189 ENST00000442898 16061 16717 9 - Ret 0 49 177 -0 190 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 190 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 191 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 191 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 192 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 192 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 193 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 193 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 194 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 194 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 195 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 195 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 196 ENST00000442898 18174 18380 9 - Spl 0 65 176 -0 196 ENST00000442898 18492 24850 9 - Spl 0 65 176 +0 1 ENST00000442898 18174 18380 9 - Spl 0 64 272 +0 1 ENST00000442898 18492 24850 9 - Ret 0 64 272 +0 2 ENST00000442898 18174 18380 9 - Spl 0 64 272 +0 2 ENST00000442898 18492 24850 9 - Ret 0 64 272 +0 3 ENST00000442898 18174 18380 9 - Spl 1 60 256 +0 3 ENST00000442898 18492 24850 9 - Spl 1 60 256 +0 4 ENST00000442898 17855 18027 9 - Spl 0 57 170 +0 5 ENST00000442898 18174 18380 9 - Spl 0 60 256 +0 5 ENST00000442898 18492 24850 9 - Spl 0 60 256 +0 6 ENST00000442898 18174 18380 9 - Spl 0 60 256 +0 6 ENST00000442898 18492 24850 9 - Spl 0 60 256 +0 7 ENST00000442898 17479 17718 9 - Spl 0 64 299 +0 7 ENST00000442898 17855 18027 9 - Spl 0 64 299 +0 8 ENST00000442898 17479 17718 9 - Spl 1 65 251 +0 8 ENST00000442898 17855 18027 9 - Spl 1 65 251 +0 9 ENST00000442898 18174 18380 9 - Spl 0 57 277 +0 9 ENST00000442898 18492 24850 9 - Ret 0 57 277 +0 10 ENST00000442898 17479 17718 9 - Spl 0 62 300 +0 10 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 11 ENST00000442898 14940 15080 9 - Spl 0 48 267 +0 12 ENST00000442898 16061 16717 9 - Ret 0 68 300 +0 13 ENST00000442898 18492 24850 9 - Spl 0 57 153 +0 14 ENST00000442898 16061 16717 9 - Ret 0 51 295 +0 15 ENST00000442898 16061 16717 9 - Ret 0 51 295 +0 16 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 17 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 18 ENST00000442898 17166 17343 9 - Spl 1 62 221 +0 18 ENST00000442898 17479 17718 9 - Spl 1 62 221 +0 19 ENST00000442898 17855 18027 9 - Spl 1 43 123 +0 20 ENST00000442898 17855 18027 9 - Spl 1 43 123 +0 21 ENST00000442898 17166 17343 9 - Spl 0 60 300 +0 21 ENST00000442898 17855 18027 9 - Spl 0 60 300 +0 22 ENST00000442898 18492 24850 9 - Ret 0 59 214 +0 23 ENST00000442898 18492 24850 9 - Spl 0 57 153 +0 24 ENST00000442898 17166 17343 9 - Spl 0 56 300 +0 24 ENST00000442898 17855 18027 9 - Spl 0 56 300 +0 25 ENST00000442898 18174 18380 9 - Spl 1 57 299 +0 25 ENST00000442898 18492 24850 9 - Ret 1 57 299 +0 26 ENST00000442898 17166 17343 9 - Spl 1 65 267 +0 26 ENST00000442898 17479 17718 9 - Spl 1 65 267 +0 27 ENST00000442898 17855 18027 9 - Spl 0 48 300 +0 27 ENST00000442898 18174 18380 9 - Ret 0 48 300 +0 28 ENST00000442898 17855 18027 9 - Spl 0 51 300 +0 28 ENST00000442898 18174 18380 9 - Spl 0 51 300 +0 29 ENST00000442898 17479 17718 9 - Spl 2 63 183 +0 29 ENST00000442898 17855 18027 9 - Spl 2 63 183 +0 30 ENST00000442898 17479 17718 9 - Spl 2 63 183 +0 30 ENST00000442898 17855 18027 9 - Spl 2 63 183 +0 31 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 31 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 32 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 32 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 33 ENST00000442898 18492 24850 9 - Ret 0 45 118 +0 34 ENST00000442898 18492 24850 9 - Ret 0 45 118 +0 35 ENST00000442898 17166 17343 9 - Spl 0 59 300 +0 35 ENST00000442898 17479 17718 9 - Spl 0 59 300 +0 35 ENST00000442898 17855 18027 9 - Spl 0 59 300 +0 36 ENST00000442898 14940 15080 9 - Ret 0 42 300 +0 37 ENST00000442898 17166 17343 9 - Spl 0 59 300 +0 37 ENST00000442898 17479 17718 9 - Spl 0 59 300 +0 37 ENST00000442898 17855 18027 9 - Spl 0 59 300 +0 38 ENST00000442898 17166 17343 9 - Spl 0 66 213 +0 38 ENST00000442898 17479 17718 9 - Spl 0 66 213 +0 39 ENST00000442898 17479 17718 9 - Spl 0 67 299 +0 39 ENST00000442898 17855 18027 9 - Spl 0 67 299 +0 40 ENST00000442898 18174 18380 9 - Spl 0 57 277 +0 40 ENST00000442898 18492 24850 9 - Ret 0 57 277 +0 41 ENST00000442898 17479 17718 9 - Spl 0 63 192 +0 41 ENST00000442898 17855 18027 9 - Spl 0 63 192 +0 42 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 42 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 43 ENST00000442898 18492 24850 9 - Ret 0 58 219 +0 44 ENST00000442898 17166 17343 9 - Spl 0 60 300 +0 44 ENST00000442898 17855 18027 9 - Spl 0 60 300 +0 45 ENST00000442898 17855 18027 9 - Spl 0 53 300 +0 45 ENST00000442898 18492 24850 9 - Spl 0 53 300 +0 46 ENST00000442898 18174 18380 9 - Spl 0 69 300 +0 46 ENST00000442898 18492 24850 9 - Ret 0 69 300 +0 47 ENST00000442898 17479 17718 9 - Ret 2 59 300 +0 47 ENST00000442898 17855 18027 9 - Ret 2 59 300 +0 48 ENST00000442898 14940 15080 9 - Spl 0 48 267 +0 49 ENST00000442898 17479 17718 9 - Spl 0 60 292 +0 49 ENST00000442898 17855 18027 9 - Spl 0 60 292 +0 50 ENST00000442898 16061 16717 9 - Spl 0 49 289 +0 50 ENST00000442898 16876 16964 9 - Spl 0 49 289 +0 51 ENST00000442898 17166 17343 9 - Spl 1 62 221 +0 51 ENST00000442898 17479 17718 9 - Spl 1 62 221 +0 52 ENST00000442898 17479 17718 9 - Spl 0 60 292 +0 52 ENST00000442898 17855 18027 9 - Spl 0 60 292 +0 53 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 53 ENST00000442898 17855 18027 9 - Spl 0 63 300 +0 54 ENST00000442898 18492 24850 9 - Ret 0 58 219 +0 55 ENST00000442898 18492 24850 9 - Ret 0 58 219 +0 56 ENST00000442898 18174 18380 9 - Spl 0 57 277 +0 56 ENST00000442898 18492 24850 9 - Ret 0 57 277 +0 57 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 57 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 58 ENST00000442898 14940 15080 9 - Ret 0 42 300 +0 59 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 59 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 60 ENST00000442898 18492 24850 9 - Ret 0 59 300 +0 61 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 61 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 62 ENST00000442898 18174 18380 9 - Ret 0 67 297 +0 63 ENST00000442898 18174 18380 9 - Ret 0 67 297 +0 64 ENST00000442898 17166 17343 9 - Spl 0 65 218 +0 64 ENST00000442898 17479 17718 9 - Spl 0 65 218 +0 65 ENST00000442898 17166 17343 9 - Spl 1 65 267 +0 65 ENST00000442898 17479 17718 9 - Spl 1 65 267 +0 66 ENST00000442898 15149 15908 9 - Spl 0 38 268 +0 66 ENST00000442898 16061 16717 9 - Ret 0 38 268 +0 67 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 67 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 68 ENST00000442898 18174 18380 9 - Spl 0 59 262 +0 68 ENST00000442898 18492 24850 9 - Ret 0 59 262 +0 69 ENST00000442898 17166 17343 9 - Spl 0 63 285 +0 69 ENST00000442898 17479 17718 9 - Spl 0 63 285 +0 70 ENST00000442898 17166 17343 9 - Spl 0 63 298 +0 70 ENST00000442898 17479 17718 9 - Spl 0 63 298 +0 70 ENST00000442898 17855 18027 9 - Spl 0 63 298 +0 71 ENST00000442898 17479 17718 9 - Spl 0 64 299 +0 71 ENST00000442898 17855 18027 9 - Spl 0 64 299 +0 72 ENST00000442898 17479 17718 9 - Spl 0 64 299 +0 72 ENST00000442898 17855 18027 9 - Spl 0 64 299 +0 73 ENST00000442898 25004 29601 9 - Ret 0 63 235 +0 74 ENST00000442898 17479 17718 9 - Spl 1 65 300 +0 74 ENST00000442898 17855 18027 9 - Spl 1 65 300 +0 75 ENST00000442898 17166 17343 9 - Spl 1 68 242 +0 75 ENST00000442898 17479 17718 9 - Spl 1 68 242 +0 76 ENST00000442898 17479 17718 9 - Spl 0 64 270 +0 76 ENST00000442898 17855 18027 9 - Spl 0 64 270 +0 77 ENST00000442898 16876 16964 9 - Spl 2 55 136 +0 78 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 78 ENST00000442898 18492 24850 9 - Ret 2 65 300 +0 79 ENST00000442898 16061 16717 9 - Spl 1 48 273 +0 80 ENST00000442898 17479 17718 9 - Spl 0 67 299 +0 80 ENST00000442898 17855 18027 9 - Spl 0 67 299 +0 81 ENST00000442898 16061 16717 9 - Ret 0 68 300 +0 82 ENST00000442898 18174 18380 9 - Spl 0 60 256 +0 82 ENST00000442898 18492 24850 9 - Spl 0 60 256 +0 83 ENST00000442898 17479 17718 9 - Spl 1 61 213 +0 83 ENST00000442898 17855 18027 9 - Spl 1 61 213 +0 84 ENST00000442898 18174 18380 9 - Spl 0 69 300 +0 84 ENST00000442898 18492 24850 9 - Ret 0 69 300 +0 85 ENST00000442898 18174 18380 9 - Spl 0 69 300 +0 85 ENST00000442898 18492 24850 9 - Ret 0 69 300 +0 86 ENST00000442898 18174 18380 9 - Spl 0 60 271 +0 86 ENST00000442898 18492 24850 9 - Ret 0 60 271 +0 87 ENST00000442898 17479 17718 9 - Ret 0 61 282 +0 87 ENST00000442898 17855 18027 9 - Spl 0 61 282 +0 88 ENST00000442898 18174 18380 9 - Spl 1 57 299 +0 88 ENST00000442898 18492 24850 9 - Ret 1 57 299 +0 89 ENST00000442898 17479 17718 9 - Spl 0 64 299 +0 89 ENST00000442898 17855 18027 9 - Spl 0 64 299 +0 90 ENST00000442898 17479 17718 9 - Spl 2 65 300 +0 90 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 91 ENST00000442898 17479 17718 9 - Spl 2 65 300 +0 91 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 92 ENST00000442898 18492 24850 9 - Ret 0 58 219 +0 93 ENST00000442898 17479 17718 9 - Spl 1 62 268 +0 93 ENST00000442898 17855 18027 9 - Spl 1 62 268 +0 94 ENST00000442898 17855 18027 9 - Spl 1 55 275 +0 94 ENST00000442898 18174 18380 9 - Spl 1 55 275 +0 95 ENST00000442898 17855 18027 9 - Spl 0 53 300 +0 95 ENST00000442898 18492 24850 9 - Spl 0 53 300 +0 96 ENST00000442898 17479 17718 9 - Ret 1 61 282 +0 96 ENST00000442898 17855 18027 9 - Spl 1 61 282 +0 97 ENST00000442898 17479 17718 9 - Spl 1 65 142 +0 98 ENST00000442898 18174 18380 9 - Spl 0 60 254 +0 98 ENST00000442898 18492 24850 9 - Spl 0 60 254 +0 99 ENST00000442898 18492 24850 9 - Spl 1 58 169 +0 100 ENST00000442898 17479 17718 9 - Spl 0 64 299 +0 100 ENST00000442898 17855 18027 9 - Spl 0 64 299 +0 101 ENST00000442898 17479 17718 9 - Spl 0 64 299 +0 101 ENST00000442898 17855 18027 9 - Spl 0 64 299 +0 102 ENST00000442898 25004 29601 9 - Ret 0 63 235 +0 103 ENST00000442898 17479 17718 9 - Spl 2 64 270 +0 103 ENST00000442898 17855 18027 9 - Spl 2 64 270 +0 104 ENST00000442898 17855 18027 9 - Spl 0 47 149 +0 105 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 105 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 106 ENST00000442898 18492 24850 9 - Ret 0 60 229 +0 107 ENST00000442898 17479 17718 9 - Spl 0 62 293 +0 107 ENST00000442898 17855 18027 9 - Spl 0 62 293 +0 108 ENST00000442898 17855 18027 9 - Spl 0 48 300 +0 108 ENST00000442898 18174 18380 9 - Ret 0 48 300 +0 109 ENST00000442898 17855 18027 9 - Spl 0 53 300 +0 109 ENST00000442898 18492 24850 9 - Spl 0 53 300 +0 110 ENST00000442898 17166 17343 9 - Spl 0 56 300 +0 110 ENST00000442898 17855 18027 9 - Spl 0 56 300 +0 111 ENST00000442898 18174 18380 9 - Spl 0 60 271 +0 111 ENST00000442898 18492 24850 9 - Ret 0 60 271 +0 112 ENST00000442898 17166 17343 9 - Spl 1 60 298 +0 112 ENST00000442898 17479 17718 9 - Spl 1 60 298 +0 112 ENST00000442898 17855 18027 9 - Spl 1 60 298 +0 113 ENST00000442898 17479 17718 9 - Spl 2 65 300 +0 113 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 114 ENST00000442898 18174 18380 9 - Spl 0 59 262 +0 114 ENST00000442898 18492 24850 9 - Ret 0 59 262 +0 115 ENST00000442898 17855 18027 9 - Spl 1 53 300 +0 115 ENST00000442898 18492 24850 9 - Spl 1 53 300 +0 116 ENST00000442898 18492 24850 9 - Ret 0 51 219 +0 117 ENST00000442898 16061 16717 9 - Ret 1 52 300 +0 118 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 118 ENST00000442898 18492 24850 9 - Ret 2 65 300 +0 119 ENST00000442898 17855 18027 9 - Spl 1 47 248 +0 119 ENST00000442898 18174 18380 9 - Spl 1 47 248 +0 120 ENST00000442898 14940 15080 9 - Spl 0 49 293 +0 121 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 121 ENST00000442898 18492 24850 9 - Ret 2 65 300 +0 122 ENST00000442898 18174 18380 9 - Spl 0 60 256 +0 122 ENST00000442898 18492 24850 9 - Spl 0 60 256 +0 123 ENST00000442898 16061 16717 9 - Ret 1 52 300 +0 124 ENST00000442898 15149 15908 9 - Spl 0 40 132 +0 125 ENST00000442898 18492 24850 9 - Ret 0 59 214 +0 126 ENST00000442898 17166 17343 9 - Spl 0 59 132 +0 127 ENST00000442898 17479 17718 9 - Spl 0 64 299 +0 127 ENST00000442898 17855 18027 9 - Spl 0 64 299 +0 128 ENST00000442898 17855 18027 9 - Spl 2 37 110 +0 129 ENST00000442898 17479 17718 9 - Spl 1 61 213 +0 129 ENST00000442898 17855 18027 9 - Spl 1 61 213 +0 130 ENST00000442898 17166 17343 9 - Spl 0 66 213 +0 130 ENST00000442898 17479 17718 9 - Spl 0 66 213 +0 131 ENST00000442898 17166 17343 9 - Spl 0 66 213 +0 131 ENST00000442898 17479 17718 9 - Spl 0 66 213 +0 132 ENST00000442898 17479 17718 9 - Spl 1 61 213 +0 132 ENST00000442898 17855 18027 9 - Spl 1 61 213 +0 133 ENST00000442898 17479 17718 9 - Spl 1 61 213 +0 133 ENST00000442898 17855 18027 9 - Spl 1 61 213 +0 134 ENST00000442898 17855 18027 9 - Spl 1 53 300 +0 134 ENST00000442898 18492 24850 9 - Spl 1 53 300 +0 135 ENST00000442898 18492 24850 9 - Ret 0 59 214 +0 136 ENST00000442898 17479 17718 9 - Spl 1 65 262 +0 136 ENST00000442898 17855 18027 9 - Spl 1 65 262 +0 137 ENST00000442898 17479 17718 9 - Spl 1 65 300 +0 137 ENST00000442898 17855 18027 9 - Spl 1 65 300 +0 138 ENST00000442898 17479 17718 9 - Ret 3 59 214 +0 139 ENST00000442898 17855 18027 9 - Spl 1 47 248 +0 139 ENST00000442898 18174 18380 9 - Spl 1 47 248 +0 140 ENST00000442898 17855 18027 9 - Spl 0 52 222 +0 140 ENST00000442898 18174 18380 9 - Spl 0 52 222 +0 141 ENST00000442898 17855 18027 9 - Spl 0 52 222 +0 141 ENST00000442898 18174 18380 9 - Spl 0 52 222 +0 142 ENST00000442898 16061 16717 9 - Spl 0 49 289 +0 142 ENST00000442898 16876 16964 9 - Spl 0 49 289 +0 143 ENST00000442898 17855 18027 9 - Spl 0 51 300 +0 143 ENST00000442898 18174 18380 9 - Spl 0 51 300 +0 144 ENST00000442898 17479 17718 9 - Ret 2 59 300 +0 144 ENST00000442898 17855 18027 9 - Ret 2 59 300 +0 145 ENST00000442898 17166 17343 9 - Spl 0 66 213 +0 145 ENST00000442898 17479 17718 9 - Spl 0 66 213 +0 146 ENST00000442898 18492 24850 9 - Spl 0 58 169 +0 147 ENST00000442898 17479 17718 9 - Spl 0 63 192 +0 147 ENST00000442898 17855 18027 9 - Spl 0 63 192 +0 148 ENST00000442898 25004 29601 9 - Ret 0 63 235 +0 149 ENST00000442898 25004 29601 9 - Ret 0 58 282 +0 150 ENST00000442898 18174 18380 9 - Ret 1 56 284 +0 150 ENST00000442898 18492 24850 9 - Ret 1 56 284 +0 151 ENST00000442898 17479 17718 9 - Spl 0 60 292 +0 151 ENST00000442898 17855 18027 9 - Spl 0 60 292 +0 152 ENST00000442898 17166 17343 9 - Spl 0 63 285 +0 152 ENST00000442898 17479 17718 9 - Spl 0 63 285 +0 153 ENST00000442898 17479 17718 9 - Ret 3 59 214 +0 154 ENST00000442898 17479 17718 9 - Ret 3 59 214 +0 155 ENST00000442898 17166 17343 9 - Spl 0 60 300 +0 155 ENST00000442898 17855 18027 9 - Spl 0 60 300 +0 156 ENST00000442898 16061 16717 9 - Spl 1 48 273 +0 157 ENST00000442898 17855 18027 9 - Spl 1 55 275 +0 157 ENST00000442898 18174 18380 9 - Spl 1 55 275 +0 158 ENST00000442898 17479 17718 9 - Ret 2 62 300 +0 159 ENST00000442898 17479 17718 9 - Ret 2 62 300 +0 160 ENST00000442898 17855 18027 9 - Spl 1 53 300 +0 160 ENST00000442898 18492 24850 9 - Spl 1 53 300 +0 161 ENST00000442898 15149 15908 9 - Spl 1 40 132 +0 162 ENST00000442898 17479 17718 9 - Spl 1 65 262 +0 162 ENST00000442898 17855 18027 9 - Spl 1 65 262 +0 163 ENST00000442898 16061 16717 9 - Ret 0 51 295 +0 164 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 164 ENST00000442898 17479 17718 9 - Spl 0 63 300 +0 164 ENST00000442898 17855 18027 9 - Spl 0 63 300 +0 165 ENST00000442898 18174 18380 9 - Spl 1 62 181 +0 166 ENST00000442898 17479 17718 9 - Spl 0 60 292 +0 166 ENST00000442898 17855 18027 9 - Spl 0 60 292 +0 167 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 168 ENST00000442898 17479 17718 9 - Spl 0 62 202 +0 168 ENST00000442898 17855 18027 9 - Spl 0 62 202 +0 169 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 169 ENST00000442898 17479 17718 9 - Spl 0 62 300 +0 170 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 170 ENST00000442898 17479 17718 9 - Spl 0 62 300 +0 171 ENST00000442898 16061 16717 9 - Ret 0 51 295 +0 172 ENST00000442898 17166 17343 9 - Spl 0 60 300 +0 172 ENST00000442898 17855 18027 9 - Spl 0 60 300 +0 173 ENST00000442898 18174 18380 9 - Spl 0 57 143 +0 174 ENST00000442898 17479 17718 9 - Ret 3 59 214 +0 175 ENST00000442898 17855 18027 9 - Spl 1 48 152 +0 176 ENST00000442898 16061 16717 9 - Spl 1 48 273 +0 177 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 178 ENST00000442898 17479 17718 9 - Spl 1 61 213 +0 178 ENST00000442898 17855 18027 9 - Spl 1 61 213 +0 179 ENST00000442898 17479 17718 9 - Spl 1 65 262 +0 179 ENST00000442898 17855 18027 9 - Spl 1 65 262 +0 180 ENST00000442898 16061 16717 9 - Ret 0 51 295 +0 181 ENST00000442898 17855 18027 9 - Spl 1 50 155 +0 182 ENST00000442898 18174 18380 9 - Spl 1 62 181 +0 183 ENST00000442898 17855 18027 9 - Spl 0 53 300 +0 183 ENST00000442898 18492 24850 9 - Spl 0 53 300 +0 184 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 184 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 185 ENST00000442898 17855 18027 9 - Spl 1 50 155 +0 186 ENST00000442898 17479 17718 9 - Spl 1 60 299 +0 186 ENST00000442898 17855 18027 9 - Spl 1 60 299 +0 187 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 187 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 188 ENST00000442898 17855 18027 9 - Spl 1 53 300 +0 188 ENST00000442898 18492 24850 9 - Spl 1 53 300 +0 189 ENST00000442898 25004 29601 9 - Ret 0 63 235 +0 190 ENST00000442898 25004 29601 9 - Ret 0 63 235 +0 191 ENST00000442898 16061 16717 9 - Ret 0 51 295 +0 192 ENST00000442898 17166 17343 9 - Spl 0 63 298 +0 192 ENST00000442898 17479 17718 9 - Spl 0 63 298 +0 192 ENST00000442898 17855 18027 9 - Spl 0 63 298 +0 193 ENST00000442898 17166 17343 9 - Spl 0 63 285 +0 193 ENST00000442898 17479 17718 9 - Spl 0 63 285 +0 194 ENST00000442898 17166 17343 9 - Spl 1 68 242 +0 194 ENST00000442898 17479 17718 9 - Spl 1 68 242 +0 195 ENST00000442898 18174 18380 9 - Spl 1 54 138 +0 196 ENST00000442898 18174 18380 9 - Spl 0 54 138 0 197 ENST00000442898 18174 18380 9 - Spl 0 65 176 -0 197 ENST00000442898 18492 24850 9 - Spl 0 65 176 -0 198 ENST00000442898 16876 16964 9 - Spl 0 46 270 -0 199 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 199 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 200 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 201 ENST00000442898 16061 16717 9 - Ret 0 49 177 -0 202 ENST00000442898 17479 17718 9 - Spl 0 63 194 -0 203 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 203 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 204 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 204 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 205 ENST00000442898 16876 16964 9 - Spl 0 46 270 -0 206 ENST00000442898 16876 16964 9 - Spl 0 46 270 -0 207 ENST00000442898 16876 16964 9 - Spl 0 46 270 -0 208 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 208 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 209 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 209 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 210 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 210 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 211 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 211 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 212 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 212 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 213 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 213 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 214 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 214 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 215 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 215 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 216 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 217 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 218 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 218 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 219 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 219 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 220 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 221 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 221 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 222 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 222 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 223 ENST00000442898 17479 17718 9 - Spl 0 63 194 -0 224 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 224 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 225 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 225 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 226 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 227 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 228 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 229 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 229 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 230 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 231 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 232 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 233 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 234 ENST00000442898 17855 18027 9 - Spl 1 50 221 -0 234 ENST00000442898 18174 18380 9 - Spl 1 50 221 -0 235 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 235 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 236 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 236 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 237 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 237 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 238 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 238 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 239 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 239 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 240 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 240 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 241 ENST00000442898 18174 18380 9 - Spl 0 65 176 -0 241 ENST00000442898 18492 24850 9 - Spl 0 65 176 -0 242 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 242 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 243 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 244 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 244 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 245 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 246 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 247 ENST00000442898 17479 17718 9 - Spl 0 63 194 -0 248 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 248 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 249 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 250 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 250 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 251 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 251 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 252 ENST00000442898 17479 17718 9 - Spl 0 63 194 -0 253 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 254 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 255 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 256 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 256 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 257 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 257 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 258 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 258 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 259 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 259 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 260 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 260 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 261 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 261 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 262 ENST00000442898 17166 17343 9 - Spl 0 63 277 -0 262 ENST00000442898 17479 17718 9 - Spl 0 63 277 -0 263 ENST00000442898 18174 18380 9 - Spl 0 65 176 -0 263 ENST00000442898 18492 24850 9 - Spl 0 65 176 -0 264 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 264 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 265 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 265 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 266 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 266 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 267 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 267 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 268 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 269 ENST00000442898 17479 17718 9 - Spl 0 63 194 -0 270 ENST00000442898 18492 24850 9 - Ret 1 66 260 -0 271 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 271 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 272 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 272 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 273 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 273 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 274 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 274 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 275 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 275 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 276 ENST00000442898 16876 16964 9 - Spl 0 46 270 -0 277 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 277 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 278 ENST00000442898 16876 16964 9 - Spl 0 46 270 -0 279 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 279 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 280 ENST00000442898 16061 16717 9 - Ret 0 48 248 -0 281 ENST00000442898 16061 16717 9 - Ret 0 48 248 -0 282 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 282 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 283 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 284 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 284 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 285 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 285 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 286 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 287 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 287 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 288 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 289 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 290 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 290 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 291 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 291 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 292 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 292 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 293 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 293 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 294 ENST00000442898 16876 16964 9 - Spl 0 46 270 -0 295 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 296 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 296 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 297 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 297 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 298 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 298 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 299 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 300 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 300 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 301 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 301 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 302 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 302 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 303 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 304 ENST00000442898 17479 17718 9 - Spl 0 66 300 -0 304 ENST00000442898 17855 18027 9 - Spl 0 66 300 -0 305 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 306 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 306 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 307 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 307 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 308 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 308 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 309 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 309 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 310 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 311 ENST00000442898 18174 18380 9 - Spl 0 65 176 -0 311 ENST00000442898 18492 24850 9 - Spl 0 65 176 -0 312 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 312 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 313 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 313 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 314 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 314 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 315 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 315 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 316 ENST00000442898 18174 18380 9 - Spl 0 57 300 -0 317 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 317 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 318 ENST00000442898 17479 17718 9 - Spl 0 65 300 -0 318 ENST00000442898 18174 18380 9 - Spl 0 65 300 -0 319 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 319 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 320 ENST00000442898 17166 17343 9 - Spl 0 64 277 -0 320 ENST00000442898 17479 17718 9 - Spl 0 64 277 -0 321 ENST00000442898 16876 16964 9 - Spl 0 46 270 -0 322 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 322 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 323 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 323 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 324 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 324 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 325 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 325 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 326 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 326 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 327 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 327 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 328 ENST00000442898 14940 15080 9 - Spl 0 52 134 -0 329 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 329 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 330 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 330 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 331 ENST00000442898 16061 16717 9 - Ret 0 48 249 -0 332 ENST00000442898 17479 17718 9 - Spl 0 62 288 -0 332 ENST00000442898 17855 18027 9 - Spl 0 62 288 -0 333 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 333 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 334 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 334 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 335 ENST00000442898 18174 18380 9 - Spl 0 59 227 -0 335 ENST00000442898 18492 24850 9 - Spl 0 59 227 -0 336 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 336 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 337 ENST00000442898 17479 17718 9 - Spl 1 62 288 -0 337 ENST00000442898 17855 18027 9 - Spl 1 62 288 -0 338 ENST00000442898 16876 16964 9 - Spl 0 47 270 -0 339 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 339 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 340 ENST00000442898 16061 16717 9 - Ret 0 49 177 -0 341 ENST00000442898 17479 17718 9 - Spl 0 65 234 -0 341 ENST00000442898 17855 18027 9 - Spl 0 65 234 -0 342 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 342 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 343 ENST00000442898 18492 24850 9 - Ret 0 66 260 -0 344 ENST00000442898 18174 18380 9 - Spl 0 65 176 -0 344 ENST00000442898 18492 24850 9 - Spl 0 65 176 -0 345 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 345 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 346 ENST00000442898 17855 18027 9 - Spl 0 50 221 -0 346 ENST00000442898 18174 18380 9 - Spl 0 50 221 -0 347 ENST00000442898 16876 16964 9 - Spl 0 46 270 -0 348 ENST00000442898 17855 18027 9 - Spl 0 45 203 -0 348 ENST00000442898 18174 18380 9 - Spl 0 45 203 -0 349 ENST00000442898 17479 17718 9 - Spl 0 58 166 -0 349 ENST00000442898 17855 18027 9 - Spl 0 58 166 +0 198 ENST00000442898 17855 18027 9 - Spl 0 47 149 +0 199 ENST00000442898 17166 17343 9 - Spl 0 66 213 +0 199 ENST00000442898 17479 17718 9 - Spl 0 66 213 +0 200 ENST00000442898 14940 15080 9 - Spl 0 54 125 +0 200 ENST00000442898 15149 15908 9 - Spl 0 54 125 +0 201 ENST00000442898 14940 15080 9 - Ret 0 42 300 +0 202 ENST00000442898 17166 17343 9 - Spl 0 65 206 +0 203 ENST00000442898 17479 17718 9 - Spl 1 65 251 +0 203 ENST00000442898 17855 18027 9 - Spl 1 65 251 +0 204 ENST00000442898 17479 17718 9 - Spl 1 65 251 +0 204 ENST00000442898 17855 18027 9 - Spl 1 65 251 +0 205 ENST00000442898 18174 18380 9 - Spl 0 69 300 +0 205 ENST00000442898 18492 24850 9 - Ret 0 69 300 +0 206 ENST00000442898 18174 18380 9 - Spl 0 69 300 +0 206 ENST00000442898 18492 24850 9 - Ret 0 69 300 +0 207 ENST00000442898 18492 24850 9 - Spl 0 57 153 +0 208 ENST00000442898 17479 17718 9 - Spl 1 61 213 +0 208 ENST00000442898 17855 18027 9 - Spl 1 61 213 +0 209 ENST00000442898 17855 18027 9 - Ret 2 36 300 +0 210 ENST00000442898 17479 17718 9 - Ret 0 45 213 +0 210 ENST00000442898 17855 18027 9 - Ret 0 45 213 +0 211 ENST00000442898 18174 18380 9 - Ret 0 67 297 +0 212 ENST00000442898 17855 18027 9 - Spl 1 59 300 +0 212 ENST00000442898 18174 18380 9 - Spl 1 59 300 +0 212 ENST00000442898 18492 24850 9 - Spl 1 59 300 +0 213 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 213 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 214 ENST00000442898 17479 17718 9 - Spl 0 64 270 +0 214 ENST00000442898 17855 18027 9 - Spl 0 64 270 +0 215 ENST00000442898 17166 17343 9 - Spl 0 59 300 +0 215 ENST00000442898 17479 17718 9 - Spl 0 59 300 +0 215 ENST00000442898 17855 18027 9 - Spl 0 59 300 +0 216 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 216 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 217 ENST00000442898 17479 17718 9 - Ret 0 61 282 +0 217 ENST00000442898 17855 18027 9 - Spl 0 61 282 +0 218 ENST00000442898 15149 15908 9 - Spl 0 40 300 +0 219 ENST00000442898 15149 15908 9 - Spl 0 40 300 +0 220 ENST00000442898 17479 17718 9 - Spl 0 60 299 +0 220 ENST00000442898 17855 18027 9 - Spl 0 60 299 +0 221 ENST00000442898 17479 17718 9 - Spl 1 61 213 +0 221 ENST00000442898 17855 18027 9 - Spl 1 61 213 +0 222 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 222 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 223 ENST00000442898 17855 18027 9 - Ret 2 36 300 +0 224 ENST00000442898 17855 18027 9 - Spl 1 55 275 +0 224 ENST00000442898 18174 18380 9 - Spl 1 55 275 +0 225 ENST00000442898 17855 18027 9 - Spl 1 55 275 +0 225 ENST00000442898 18174 18380 9 - Spl 1 55 275 +0 226 ENST00000442898 25004 29601 9 - Ret 0 63 235 +0 227 ENST00000442898 25004 29601 9 - Ret 0 63 235 +0 228 ENST00000442898 17479 17718 9 - Spl 0 64 299 +0 228 ENST00000442898 17855 18027 9 - Spl 0 64 299 +0 229 ENST00000442898 17855 18027 9 - Spl 1 55 275 +0 229 ENST00000442898 18174 18380 9 - Spl 1 55 275 +0 230 ENST00000442898 18174 18380 9 - Spl 1 49 300 +0 231 ENST00000442898 17479 17718 9 - Ret 0 61 282 +0 231 ENST00000442898 17855 18027 9 - Spl 0 61 282 +0 232 ENST00000442898 18174 18380 9 - Spl 1 57 299 +0 232 ENST00000442898 18492 24850 9 - Ret 1 57 299 +0 233 ENST00000442898 17479 17718 9 - Spl 1 65 300 +0 233 ENST00000442898 17855 18027 9 - Spl 1 65 300 +0 234 ENST00000442898 18492 24850 9 - Ret 0 51 219 +0 235 ENST00000442898 17479 17718 9 - Spl 0 62 300 +0 235 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 236 ENST00000442898 17479 17718 9 - Spl 1 62 300 +0 236 ENST00000442898 17855 18027 9 - Spl 1 62 300 +0 236 ENST00000442898 18174 18380 9 - Spl 1 62 300 +0 237 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 237 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 238 ENST00000442898 17479 17718 9 - Spl 2 63 183 +0 238 ENST00000442898 17855 18027 9 - Spl 2 63 183 +0 239 ENST00000442898 18174 18380 9 - Ret 0 67 297 +0 240 ENST00000442898 18492 24850 9 - Ret 0 51 218 +0 241 ENST00000442898 17479 17718 9 - Spl 0 63 192 +0 241 ENST00000442898 17855 18027 9 - Spl 0 63 192 +0 242 ENST00000442898 18174 18380 9 - Spl 0 64 272 +0 242 ENST00000442898 18492 24850 9 - Ret 0 64 272 +0 243 ENST00000442898 15149 15908 9 - Spl 0 38 268 +0 243 ENST00000442898 16061 16717 9 - Ret 0 38 268 +0 244 ENST00000442898 17855 18027 9 - Spl 1 55 275 +0 244 ENST00000442898 18174 18380 9 - Spl 1 55 275 +0 245 ENST00000442898 17479 17718 9 - Spl 2 65 300 +0 245 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 246 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 246 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 247 ENST00000442898 16061 16717 9 - Ret 0 68 300 +0 248 ENST00000442898 16061 16717 9 - Spl 1 48 273 +0 249 ENST00000442898 18174 18380 9 - Spl 0 60 256 +0 249 ENST00000442898 18492 24850 9 - Spl 0 60 256 +0 250 ENST00000442898 16061 16717 9 - Ret 1 52 300 +0 251 ENST00000442898 17855 18027 9 - Spl 0 53 300 +0 251 ENST00000442898 18492 24850 9 - Spl 0 53 300 +0 252 ENST00000442898 18174 18380 9 - Ret 2 41 288 +0 253 ENST00000442898 17855 18027 9 - Spl 1 53 300 +0 253 ENST00000442898 18492 24850 9 - Spl 1 53 300 +0 254 ENST00000442898 17855 18027 9 - Spl 1 56 291 +0 254 ENST00000442898 18174 18380 9 - Spl 1 56 291 +0 254 ENST00000442898 18492 24850 9 - Ret 1 56 291 +0 255 ENST00000442898 17855 18027 9 - Spl 1 53 300 +0 255 ENST00000442898 18492 24850 9 - Spl 1 53 300 +0 256 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 256 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 257 ENST00000442898 25004 29601 9 - Ret 0 63 235 +0 258 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 258 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 259 ENST00000442898 17855 18027 9 - Spl 2 37 110 +0 260 ENST00000442898 25004 29601 9 - Ret 0 63 235 +0 261 ENST00000442898 17479 17718 9 - Spl 2 63 183 +0 261 ENST00000442898 17855 18027 9 - Spl 2 63 183 +0 262 ENST00000442898 17166 17343 9 - Spl 0 60 300 +0 262 ENST00000442898 17855 18027 9 - Spl 0 60 300 +0 263 ENST00000442898 17166 17343 9 - Spl 0 60 300 +0 263 ENST00000442898 17855 18027 9 - Spl 0 60 300 +0 264 ENST00000442898 17166 17343 9 - Spl 0 60 300 +0 264 ENST00000442898 17855 18027 9 - Spl 0 60 300 +0 265 ENST00000442898 18174 18380 9 - Spl 0 65 176 +0 266 ENST00000442898 17479 17718 9 - Ret 2 59 300 +0 266 ENST00000442898 17855 18027 9 - Ret 2 59 300 +0 267 ENST00000442898 17479 17718 9 - Ret 3 59 300 +0 267 ENST00000442898 17855 18027 9 - Ret 3 59 300 +0 268 ENST00000442898 17479 17718 9 - Spl 0 66 298 +0 268 ENST00000442898 18174 18380 9 - Spl 0 66 298 +0 269 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 269 ENST00000442898 17479 17718 9 - Spl 0 62 300 +0 270 ENST00000442898 18174 18380 9 - Spl 0 58 160 +0 271 ENST00000442898 17479 17718 9 - Spl 1 61 213 +0 271 ENST00000442898 17855 18027 9 - Spl 1 61 213 +0 272 ENST00000442898 17479 17718 9 - Ret 2 59 300 +0 272 ENST00000442898 17855 18027 9 - Ret 2 59 300 +0 273 ENST00000442898 17166 17343 9 - Spl 2 68 242 +0 273 ENST00000442898 17479 17718 9 - Spl 2 68 242 +0 274 ENST00000442898 17166 17343 9 - Spl 1 62 221 +0 274 ENST00000442898 17479 17718 9 - Spl 1 62 221 +0 275 ENST00000442898 18174 18380 9 - Spl 0 57 277 +0 275 ENST00000442898 18492 24850 9 - Ret 0 57 277 +0 276 ENST00000442898 17166 17343 9 - Spl 0 59 300 +0 276 ENST00000442898 17855 18027 9 - Spl 0 59 300 +0 277 ENST00000442898 18174 18380 9 - Ret 0 67 297 +0 278 ENST00000442898 18492 24850 9 - Ret 0 60 292 +0 279 ENST00000442898 17479 17718 9 - Ret 2 62 300 +0 280 ENST00000442898 17479 17718 9 - Ret 2 62 300 +0 281 ENST00000442898 17166 17343 9 - Spl 0 63 285 +0 281 ENST00000442898 17479 17718 9 - Spl 0 63 285 +0 282 ENST00000442898 17166 17343 9 - Spl 0 59 300 +0 282 ENST00000442898 17479 17718 9 - Spl 0 59 300 +0 282 ENST00000442898 17855 18027 9 - Spl 0 59 300 +0 283 ENST00000442898 17166 17343 9 - Spl 1 65 267 +0 283 ENST00000442898 17479 17718 9 - Spl 1 65 267 +0 284 ENST00000442898 17479 17718 9 - Spl 0 64 299 +0 284 ENST00000442898 17855 18027 9 - Spl 0 64 299 +0 285 ENST00000442898 18174 18380 9 - Spl 0 59 262 +0 285 ENST00000442898 18492 24850 9 - Ret 0 59 262 +0 286 ENST00000442898 18174 18380 9 - Spl 0 59 262 +0 286 ENST00000442898 18492 24850 9 - Ret 0 59 262 +0 287 ENST00000442898 17479 17718 9 - Spl 1 65 251 +0 287 ENST00000442898 17855 18027 9 - Spl 1 65 251 +0 288 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 289 ENST00000442898 17479 17718 9 - Ret 0 45 213 +0 289 ENST00000442898 17855 18027 9 - Ret 0 45 213 +0 290 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 291 ENST00000442898 17166 17343 9 - Spl 0 60 300 +0 291 ENST00000442898 17855 18027 9 - Spl 0 60 300 +0 292 ENST00000442898 17479 17718 9 - Ret 0 63 197 +0 292 ENST00000442898 17855 18027 9 - Spl 0 63 197 +0 293 ENST00000442898 17479 17718 9 - Ret 0 63 197 +0 293 ENST00000442898 17855 18027 9 - Spl 0 63 197 +0 294 ENST00000442898 18174 18380 9 - Spl 1 57 299 +0 294 ENST00000442898 18492 24850 9 - Ret 1 57 299 +0 295 ENST00000442898 17855 18027 9 - Ret 2 45 147 +0 296 ENST00000442898 17479 17718 9 - Spl 1 61 213 +0 296 ENST00000442898 17855 18027 9 - Spl 1 61 213 +0 297 ENST00000442898 17479 17718 9 - Spl 0 60 292 +0 297 ENST00000442898 17855 18027 9 - Spl 0 60 292 +0 298 ENST00000442898 17479 17718 9 - Spl 0 60 292 +0 298 ENST00000442898 17855 18027 9 - Spl 0 60 292 +0 299 ENST00000442898 18174 18380 9 - Spl 0 60 256 +0 299 ENST00000442898 18492 24850 9 - Spl 0 60 256 +0 300 ENST00000442898 18174 18380 9 - Spl 0 60 256 +0 300 ENST00000442898 18492 24850 9 - Spl 0 60 256 +0 301 ENST00000442898 17166 17343 9 - Spl 1 65 267 +0 301 ENST00000442898 17479 17718 9 - Spl 1 65 267 +0 302 ENST00000442898 17166 17343 9 - Spl 1 65 267 +0 302 ENST00000442898 17479 17718 9 - Spl 1 65 267 +0 303 ENST00000442898 18174 18380 9 - Spl 1 49 300 +0 304 ENST00000442898 18174 18380 9 - Spl 0 54 300 +0 304 ENST00000442898 18492 24850 9 - Ret 0 54 300 +0 305 ENST00000442898 18492 24850 9 - Ret 0 60 292 +0 306 ENST00000442898 16061 16717 9 - Ret 1 52 300 +0 307 ENST00000442898 17166 17343 9 - Spl 1 63 242 +0 307 ENST00000442898 17479 17718 9 - Spl 1 63 242 +0 308 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 308 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 309 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 309 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 310 ENST00000442898 17479 17718 9 - Ret 0 61 282 +0 310 ENST00000442898 17855 18027 9 - Spl 0 61 282 +0 311 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 311 ENST00000442898 17479 17718 9 - Spl 0 62 300 +0 312 ENST00000442898 17479 17718 9 - Spl 0 62 293 +0 312 ENST00000442898 17855 18027 9 - Spl 0 62 293 +0 313 ENST00000442898 17855 18027 9 - Spl 1 53 300 +0 313 ENST00000442898 18492 24850 9 - Spl 1 53 300 +0 314 ENST00000442898 17479 17718 9 - Spl 0 60 292 +0 314 ENST00000442898 17855 18027 9 - Spl 0 60 292 +0 315 ENST00000442898 17479 17718 9 - Spl 0 60 292 +0 315 ENST00000442898 17855 18027 9 - Spl 0 60 292 +0 316 ENST00000442898 17166 17343 9 - Spl 1 61 227 +0 316 ENST00000442898 17479 17718 9 - Spl 1 61 227 +0 317 ENST00000442898 18174 18380 9 - Spl 1 57 299 +0 317 ENST00000442898 18492 24850 9 - Ret 1 57 299 +0 318 ENST00000442898 18174 18380 9 - Spl 1 57 299 +0 318 ENST00000442898 18492 24850 9 - Ret 1 57 299 +0 319 ENST00000442898 18174 18380 9 - Spl 1 57 299 +0 319 ENST00000442898 18492 24850 9 - Ret 1 57 299 +0 320 ENST00000442898 18174 18380 9 - Spl 0 54 300 +0 320 ENST00000442898 18492 24850 9 - Ret 0 54 300 +0 321 ENST00000442898 17855 18027 9 - Ret 2 36 300 +0 322 ENST00000442898 16061 16717 9 - Ret 1 52 300 +0 323 ENST00000442898 17855 18027 9 - Ret 2 36 300 +0 324 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 325 ENST00000442898 17855 18027 9 - Spl 1 48 152 +0 326 ENST00000442898 18492 24850 9 - Spl 0 58 169 +0 327 ENST00000442898 17479 17718 9 - Ret 0 45 213 +0 327 ENST00000442898 17855 18027 9 - Ret 0 45 213 +0 328 ENST00000442898 18174 18380 9 - Spl 0 57 277 +0 328 ENST00000442898 18492 24850 9 - Ret 0 57 277 +0 329 ENST00000442898 17855 18027 9 - Spl 1 55 275 +0 329 ENST00000442898 18174 18380 9 - Spl 1 55 275 +0 330 ENST00000442898 17479 17718 9 - Spl 1 62 268 +0 330 ENST00000442898 17855 18027 9 - Spl 1 62 268 +0 331 ENST00000442898 17479 17718 9 - Spl 1 62 268 +0 331 ENST00000442898 17855 18027 9 - Spl 1 62 268 +0 332 ENST00000442898 17855 18027 9 - Spl 2 36 111 +0 333 ENST00000442898 14940 15080 9 - Ret 0 42 300 +0 334 ENST00000442898 18492 24850 9 - Ret 0 60 229 +0 335 ENST00000442898 15149 15908 9 - Spl 0 40 300 +0 336 ENST00000442898 18174 18380 9 - Spl 1 64 212 +0 336 ENST00000442898 18492 24850 9 - Ret 1 64 212 +0 337 ENST00000442898 17479 17718 9 - Ret 2 62 300 +0 338 ENST00000442898 17166 17343 9 - Spl 1 62 221 +0 338 ENST00000442898 17479 17718 9 - Spl 1 62 221 +0 339 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 339 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 340 ENST00000442898 17166 17343 9 - Spl 1 62 300 +0 340 ENST00000442898 17855 18027 9 - Spl 1 62 300 +0 341 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 341 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 342 ENST00000442898 17479 17718 9 - Spl 1 65 262 +0 342 ENST00000442898 17855 18027 9 - Spl 1 65 262 +0 343 ENST00000442898 17479 17718 9 - Spl 1 65 251 +0 343 ENST00000442898 17855 18027 9 - Spl 1 65 251 +0 344 ENST00000442898 15149 15908 9 - Spl 0 40 300 +0 345 ENST00000442898 17479 17718 9 - Spl 2 65 300 +0 345 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 346 ENST00000442898 18174 18380 9 - Spl 1 57 299 +0 346 ENST00000442898 18492 24850 9 - Ret 1 57 299 +0 347 ENST00000442898 17479 17718 9 - Spl 0 62 202 +0 347 ENST00000442898 17855 18027 9 - Spl 0 62 202 +0 348 ENST00000442898 17855 18027 9 - Spl 0 48 299 +0 348 ENST00000442898 18174 18380 9 - Ret 0 48 299 +0 349 ENST00000442898 17479 17718 9 - Ret 2 62 300 +0 350 ENST00000442898 17479 17718 9 - Ret 2 62 300 +0 351 ENST00000442898 16061 16717 9 - Ret 1 52 300 +0 352 ENST00000442898 16061 16717 9 - Ret 1 52 300 +0 353 ENST00000442898 18174 18380 9 - Spl 1 49 300 +0 354 ENST00000442898 14940 15080 9 - Ret 0 42 300 +0 355 ENST00000442898 17166 17343 9 - Spl 1 62 221 +0 355 ENST00000442898 17479 17718 9 - Spl 1 62 221 +0 356 ENST00000442898 18174 18380 9 - Spl 1 64 212 +0 356 ENST00000442898 18492 24850 9 - Ret 1 64 212 +0 357 ENST00000442898 17166 17343 9 - Spl 0 66 213 +0 357 ENST00000442898 17479 17718 9 - Spl 0 66 213 +0 358 ENST00000442898 18174 18380 9 - Spl 0 54 300 +0 358 ENST00000442898 18492 24850 9 - Ret 0 54 300 +0 359 ENST00000442898 18492 24850 9 - Ret 0 59 214 +0 360 ENST00000442898 15149 15908 9 - Spl 0 38 268 +0 360 ENST00000442898 16061 16717 9 - Ret 0 38 268 +0 361 ENST00000442898 17479 17718 9 - Ret 0 65 300 +0 361 ENST00000442898 17855 18027 9 - Spl 0 65 300 +0 361 ENST00000442898 18174 18380 9 - Spl 0 65 300 +0 362 ENST00000442898 18174 18380 9 - Spl 0 60 271 +0 362 ENST00000442898 18492 24850 9 - Ret 0 60 271 +0 363 ENST00000442898 17479 17718 9 - Ret 0 45 213 +0 363 ENST00000442898 17855 18027 9 - Ret 0 45 213 +0 364 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 364 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 365 ENST00000442898 17166 17343 9 - Spl 0 63 298 +0 365 ENST00000442898 17479 17718 9 - Spl 0 63 298 +0 365 ENST00000442898 17855 18027 9 - Spl 0 63 298 +0 366 ENST00000442898 17479 17718 9 - Spl 2 70 208 +0 367 ENST00000442898 17479 17718 9 - Ret 2 59 300 +0 367 ENST00000442898 17855 18027 9 - Ret 2 59 300 +0 368 ENST00000442898 17479 17718 9 - Ret 0 61 282 +0 368 ENST00000442898 17855 18027 9 - Spl 0 61 282 +0 369 ENST00000442898 17166 17343 9 - Spl 0 65 218 +0 369 ENST00000442898 17479 17718 9 - Spl 0 65 218 +0 370 ENST00000442898 17166 17343 9 - Spl 1 60 298 +0 370 ENST00000442898 17479 17718 9 - Spl 1 60 298 +0 370 ENST00000442898 17855 18027 9 - Spl 1 60 298 +0 371 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 371 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 372 ENST00000442898 18174 18380 9 - Spl 1 64 212 +0 372 ENST00000442898 18492 24850 9 - Ret 1 64 212 +0 373 ENST00000442898 17855 18027 9 - Spl 1 56 291 +0 373 ENST00000442898 18174 18380 9 - Spl 1 56 291 +0 373 ENST00000442898 18492 24850 9 - Ret 1 56 291 +0 374 ENST00000442898 17855 18027 9 - Spl 1 56 291 +0 374 ENST00000442898 18174 18380 9 - Spl 1 56 291 +0 374 ENST00000442898 18492 24850 9 - Ret 1 56 291 +0 375 ENST00000442898 18174 18380 9 - Spl 0 64 272 +0 375 ENST00000442898 18492 24850 9 - Ret 0 64 272 +0 376 ENST00000442898 17479 17718 9 - Spl 2 65 300 +0 376 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 377 ENST00000442898 18174 18380 9 - Spl 0 69 300 +0 377 ENST00000442898 18492 24850 9 - Ret 0 69 300 +0 378 ENST00000442898 17479 17718 9 - Spl 1 62 300 +0 378 ENST00000442898 17855 18027 9 - Spl 1 62 300 +0 378 ENST00000442898 18174 18380 9 - Spl 1 62 300 +0 379 ENST00000442898 17166 17343 9 - Spl 0 63 298 +0 379 ENST00000442898 17479 17718 9 - Spl 0 63 298 +0 379 ENST00000442898 17855 18027 9 - Spl 0 63 298 +0 380 ENST00000442898 17479 17718 9 - Spl 0 62 300 +0 380 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 381 ENST00000442898 17855 18027 9 - Spl 0 62 181 +0 382 ENST00000442898 17479 17718 9 - Ret 2 59 300 +0 382 ENST00000442898 17855 18027 9 - Ret 2 59 300 +0 383 ENST00000442898 17479 17718 9 - Ret 2 59 300 +0 383 ENST00000442898 17855 18027 9 - Ret 2 59 300 +0 384 ENST00000442898 17479 17718 9 - Spl 2 65 300 +0 384 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 385 ENST00000442898 17479 17718 9 - Spl 0 60 299 +0 385 ENST00000442898 17855 18027 9 - Spl 0 60 299 +0 386 ENST00000442898 17166 17343 9 - Spl 1 68 242 +0 386 ENST00000442898 17479 17718 9 - Spl 1 68 242 +0 387 ENST00000442898 17479 17718 9 - Ret 0 63 197 +0 387 ENST00000442898 17855 18027 9 - Spl 0 63 197 +0 388 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 388 ENST00000442898 18492 24850 9 - Ret 2 65 300 +0 389 ENST00000442898 25004 29601 9 - Ret 0 63 235 +0 390 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 390 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 391 ENST00000442898 17479 17718 9 - Spl 1 62 268 +0 391 ENST00000442898 17855 18027 9 - Spl 1 62 268 +0 392 ENST00000442898 18174 18380 9 - Spl 0 65 176 +0 393 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 393 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 394 ENST00000442898 17166 17343 9 - Spl 0 59 300 +0 394 ENST00000442898 17855 18027 9 - Spl 0 59 300 +0 395 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 395 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 396 ENST00000442898 18174 18380 9 - Spl 0 59 262 +0 396 ENST00000442898 18492 24850 9 - Ret 0 59 262 +0 397 ENST00000442898 17855 18027 9 - Spl 1 55 275 +0 397 ENST00000442898 18174 18380 9 - Spl 1 55 275 +0 398 ENST00000442898 16061 16717 9 - Spl 1 48 273 +0 399 ENST00000442898 16061 16717 9 - Spl 1 48 273 +0 400 ENST00000442898 17479 17718 9 - Spl 0 67 213 +0 401 ENST00000442898 17855 18027 9 - Spl 1 47 248 +0 401 ENST00000442898 18174 18380 9 - Spl 1 47 248 +0 402 ENST00000442898 16061 16717 9 - Ret 1 48 299 +0 403 ENST00000442898 17479 17718 9 - Spl 0 63 192 +0 403 ENST00000442898 17855 18027 9 - Spl 0 63 192 +0 404 ENST00000442898 16876 16964 9 - Spl 2 46 208 +0 405 ENST00000442898 18174 18380 9 - Spl 0 57 277 +0 405 ENST00000442898 18492 24850 9 - Ret 0 57 277 +0 406 ENST00000442898 14940 15080 9 - Spl 0 49 293 +0 407 ENST00000442898 18174 18380 9 - Spl 0 60 271 +0 407 ENST00000442898 18492 24850 9 - Ret 0 60 271 +0 408 ENST00000442898 17166 17343 9 - Spl 0 63 298 +0 408 ENST00000442898 17479 17718 9 - Spl 0 63 298 +0 408 ENST00000442898 17855 18027 9 - Spl 0 63 298 +0 409 ENST00000442898 18174 18380 9 - Spl 0 64 272 +0 409 ENST00000442898 18492 24850 9 - Ret 0 64 272 +0 410 ENST00000442898 18174 18380 9 - Spl 0 69 300 +0 410 ENST00000442898 18492 24850 9 - Ret 0 69 300 +0 411 ENST00000442898 18174 18380 9 - Spl 0 69 300 +0 411 ENST00000442898 18492 24850 9 - Ret 0 69 300 +0 412 ENST00000442898 17479 17718 9 - Spl 0 64 299 +0 412 ENST00000442898 17855 18027 9 - Spl 0 64 299 +0 413 ENST00000442898 16061 16717 9 - Ret 0 51 295 +0 414 ENST00000442898 18492 24850 9 - Spl 0 58 169 +0 415 ENST00000442898 18174 18380 9 - Spl 0 57 277 +0 415 ENST00000442898 18492 24850 9 - Ret 0 57 277 +0 416 ENST00000442898 17166 17343 9 - Spl 1 60 298 +0 416 ENST00000442898 17479 17718 9 - Spl 1 60 298 +0 416 ENST00000442898 17855 18027 9 - Spl 1 60 298 +0 417 ENST00000442898 17479 17718 9 - Spl 1 65 262 +0 417 ENST00000442898 17855 18027 9 - Spl 1 65 262 +0 418 ENST00000442898 17855 18027 9 - Spl 0 47 149 +0 419 ENST00000442898 18492 24850 9 - Ret 0 58 219 +0 420 ENST00000442898 17855 18027 9 - Spl 1 48 152 +0 421 ENST00000442898 15149 15908 9 - Spl 0 40 300 +0 422 ENST00000442898 17166 17343 9 - Spl 1 60 298 +0 422 ENST00000442898 17479 17718 9 - Spl 1 60 298 +0 422 ENST00000442898 17855 18027 9 - Spl 1 60 298 +0 423 ENST00000442898 17166 17343 9 - Spl 1 63 242 +0 423 ENST00000442898 17479 17718 9 - Spl 1 63 242 +0 424 ENST00000442898 17166 17343 9 - Spl 1 63 242 +0 424 ENST00000442898 17479 17718 9 - Spl 1 63 242 +0 425 ENST00000442898 18174 18380 9 - Spl 1 62 181 +0 426 ENST00000442898 16061 16717 9 - Ret 1 52 300 +0 427 ENST00000442898 17479 17718 9 - Ret 0 61 282 +0 427 ENST00000442898 17855 18027 9 - Spl 0 61 282 +0 428 ENST00000442898 18174 18380 9 - Spl 1 49 300 +0 429 ENST00000442898 18174 18380 9 - Ret 0 52 281 +0 430 ENST00000442898 17479 17718 9 - Spl 0 67 299 +0 430 ENST00000442898 17855 18027 9 - Spl 0 67 299 +0 431 ENST00000442898 17166 17343 9 - Spl 0 59 300 +0 431 ENST00000442898 17479 17718 9 - Spl 0 59 300 +0 431 ENST00000442898 17855 18027 9 - Spl 0 59 300 +0 432 ENST00000442898 17479 17718 9 - Spl 2 65 300 +0 432 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 433 ENST00000442898 17479 17718 9 - Spl 2 65 300 +0 433 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 434 ENST00000442898 18492 24850 9 - Spl 0 58 169 +0 435 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 435 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 436 ENST00000442898 17855 18027 9 - Ret 2 36 300 +0 437 ENST00000442898 14940 15080 9 - Spl 0 49 293 +0 438 ENST00000442898 14940 15080 9 - Spl 0 49 293 +0 439 ENST00000442898 16061 16717 9 - Ret 1 36 220 +0 440 ENST00000442898 17855 18027 9 - Spl 1 47 248 +0 440 ENST00000442898 18174 18380 9 - Spl 1 47 248 +0 441 ENST00000442898 18492 24850 9 - Ret 0 59 214 +0 442 ENST00000442898 17479 17718 9 - Ret 0 45 213 +0 442 ENST00000442898 17855 18027 9 - Ret 0 45 213 +0 443 ENST00000442898 17479 17718 9 - Spl 1 62 298 +0 443 ENST00000442898 18174 18380 9 - Spl 1 62 298 +0 444 ENST00000442898 18174 18380 9 - Ret 0 67 297 +0 445 ENST00000442898 17479 17718 9 - Ret 0 61 282 +0 445 ENST00000442898 17855 18027 9 - Spl 0 61 282 +0 446 ENST00000442898 18174 18380 9 - Spl 0 63 272 +0 446 ENST00000442898 18492 24850 9 - Ret 0 63 272 +0 447 ENST00000442898 17479 17718 9 - Spl 2 65 300 +0 447 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 448 ENST00000442898 17166 17343 9 - Spl 0 68 293 +0 448 ENST00000442898 17479 17718 9 - Spl 0 68 293 +0 449 ENST00000442898 14940 15080 9 - Spl 0 49 208 +0 450 ENST00000442898 18174 18380 9 - Ret 0 67 297 +0 451 ENST00000442898 17855 18027 9 - Spl 0 48 125 +0 452 ENST00000442898 17166 17343 9 - Spl 0 59 300 +0 452 ENST00000442898 17479 17718 9 - Spl 0 59 300 +0 452 ENST00000442898 17855 18027 9 - Spl 0 59 300 +0 453 ENST00000442898 17479 17718 9 - Spl 0 60 299 +0 453 ENST00000442898 17855 18027 9 - Spl 0 60 299 +0 454 ENST00000442898 17855 18027 9 - Spl 0 53 300 +0 454 ENST00000442898 18492 24850 9 - Spl 0 53 300 +0 455 ENST00000442898 17855 18027 9 - Spl 0 35 300 +0 456 ENST00000442898 17855 18027 9 - Spl 0 39 117 +0 457 ENST00000442898 17855 18027 9 - Spl 0 48 300 +0 457 ENST00000442898 18174 18380 9 - Ret 0 48 300 +0 458 ENST00000442898 17855 18027 9 - Spl 0 48 300 +0 458 ENST00000442898 18174 18380 9 - Ret 0 48 300 +0 459 ENST00000442898 17855 18027 9 - Spl 0 35 300 +0 460 ENST00000442898 17855 18027 9 - Spl 0 53 300 +0 460 ENST00000442898 18492 24850 9 - Spl 0 53 300 +0 461 ENST00000442898 25004 29601 9 - Ret 0 63 235 +0 462 ENST00000442898 16876 16964 9 - Spl 2 46 208 +0 463 ENST00000442898 17855 18027 9 - Spl 1 47 248 +0 463 ENST00000442898 18174 18380 9 - Spl 1 47 248 +0 464 ENST00000442898 17479 17718 9 - Spl 0 67 213 +0 465 ENST00000442898 18174 18380 9 - Spl 0 69 300 +0 465 ENST00000442898 18492 24850 9 - Ret 0 69 300 +0 466 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 466 ENST00000442898 18492 24850 9 - Ret 2 65 300 +0 467 ENST00000442898 16061 16717 9 - Spl 1 49 289 +0 467 ENST00000442898 16876 16964 9 - Spl 1 49 289 +0 468 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 468 ENST00000442898 17479 17718 9 - Spl 0 63 300 +0 468 ENST00000442898 17855 18027 9 - Spl 0 63 300 +0 469 ENST00000442898 17855 18027 9 - Spl 1 55 275 +0 469 ENST00000442898 18174 18380 9 - Spl 1 55 275 +0 470 ENST00000442898 17166 17343 9 - Spl 1 62 221 +0 470 ENST00000442898 17479 17718 9 - Spl 1 62 221 +0 471 ENST00000442898 18492 24850 9 - Ret 0 51 225 +0 472 ENST00000442898 17855 18027 9 - Ret 2 45 147 +0 473 ENST00000442898 16061 16717 9 - Ret 1 52 300 +0 474 ENST00000442898 18174 18380 9 - Spl 0 54 300 +0 474 ENST00000442898 18492 24850 9 - Ret 0 54 300 +0 475 ENST00000442898 18492 24850 9 - Ret 0 51 230 +0 476 ENST00000442898 18492 24850 9 - Ret 0 51 222 +0 477 ENST00000442898 18174 18380 9 - Ret 2 41 288 +0 478 ENST00000442898 18492 24850 9 - Ret 0 60 292 +0 479 ENST00000442898 16061 16717 9 - Ret 0 51 295 +0 480 ENST00000442898 15149 15908 9 - Spl 0 38 268 +0 480 ENST00000442898 16061 16717 9 - Ret 0 38 268 +0 481 ENST00000442898 14940 15080 9 - Spl 0 49 208 +0 482 ENST00000442898 18492 24850 9 - Ret 0 58 219 +0 483 ENST00000442898 18492 24850 9 - Ret 0 58 219 +0 484 ENST00000442898 14940 15080 9 - Ret 1 54 233 +0 484 ENST00000442898 16876 16964 9 - Ret 1 54 233 +0 484 ENST00000442898 18492 24850 9 - Ret 1 54 233 +0 485 ENST00000442898 17479 17718 9 - Spl 0 62 293 +0 485 ENST00000442898 17855 18027 9 - Spl 0 62 293 +0 486 ENST00000442898 18174 18380 9 - Spl 1 57 299 +0 486 ENST00000442898 18492 24850 9 - Ret 1 57 299 +0 487 ENST00000442898 17166 17343 9 - Spl 0 66 213 +0 487 ENST00000442898 17479 17718 9 - Spl 0 66 213 +0 488 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 488 ENST00000442898 18492 24850 9 - Ret 2 65 300 +0 489 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 489 ENST00000442898 18492 24850 9 - Ret 2 65 300 +0 490 ENST00000442898 16061 16717 9 - Ret 0 51 295 +0 491 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 491 ENST00000442898 17479 17718 9 - Spl 0 63 300 +0 491 ENST00000442898 17855 18027 9 - Spl 0 63 300 +0 492 ENST00000442898 17479 17718 9 - Spl 0 64 270 +0 492 ENST00000442898 17855 18027 9 - Spl 0 64 270 +0 493 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 493 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 494 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 494 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 495 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 495 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 496 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 497 ENST00000442898 17479 17718 9 - Spl 2 61 193 +0 497 ENST00000442898 17855 18027 9 - Spl 2 61 193 +0 498 ENST00000442898 17479 17718 9 - Spl 0 60 292 +0 498 ENST00000442898 17855 18027 9 - Spl 0 60 292 +0 499 ENST00000442898 17166 17343 9 - Spl 0 63 298 +0 499 ENST00000442898 17479 17718 9 - Spl 0 63 298 +0 499 ENST00000442898 17855 18027 9 - Spl 0 63 298 +0 500 ENST00000442898 17479 17718 9 - Spl 1 65 262 +0 500 ENST00000442898 17855 18027 9 - Spl 1 65 262 +0 501 ENST00000442898 17855 18027 9 - Spl 1 43 123 +0 502 ENST00000442898 17479 17718 9 - Spl 2 70 208 +0 503 ENST00000442898 17855 18027 9 - Spl 0 51 300 +0 503 ENST00000442898 18174 18380 9 - Spl 0 51 300 +0 504 ENST00000442898 17479 17718 9 - Spl 0 60 299 +0 504 ENST00000442898 17855 18027 9 - Spl 0 60 299 +0 505 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 505 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 506 ENST00000442898 17855 18027 9 - Spl 0 48 300 +0 506 ENST00000442898 18174 18380 9 - Ret 0 48 300 +0 507 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 507 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 508 ENST00000442898 17479 17718 9 - Spl 0 62 300 +0 508 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 509 ENST00000442898 17479 17718 9 - Spl 0 62 300 +0 509 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 510 ENST00000442898 17855 18027 9 - Spl 0 53 300 +0 510 ENST00000442898 18492 24850 9 - Spl 0 53 300 +0 511 ENST00000442898 17855 18027 9 - Spl 0 51 300 +0 511 ENST00000442898 18174 18380 9 - Spl 0 51 300 +0 512 ENST00000442898 17479 17718 9 - Spl 0 62 300 +0 512 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 513 ENST00000442898 18492 24850 9 - Ret 0 51 220 +0 514 ENST00000442898 17479 17718 9 - Spl 0 64 299 +0 514 ENST00000442898 17855 18027 9 - Spl 0 64 299 +0 515 ENST00000442898 17855 18027 9 - Spl 1 50 155 +0 516 ENST00000442898 17479 17718 9 - Spl 0 62 293 +0 516 ENST00000442898 17855 18027 9 - Spl 0 62 293 +0 517 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 518 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 519 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 520 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 520 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 521 ENST00000442898 17479 17718 9 - Spl 0 64 270 +0 521 ENST00000442898 17855 18027 9 - Spl 0 64 270 +0 522 ENST00000442898 16061 16717 9 - Spl 1 48 273 +0 523 ENST00000442898 16061 16717 9 - Ret 1 36 220 +0 524 ENST00000442898 17166 17343 9 - Spl 0 63 300 +0 524 ENST00000442898 17479 17718 9 - Spl 0 63 300 +0 524 ENST00000442898 17855 18027 9 - Spl 0 63 300 +0 525 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 525 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 526 ENST00000442898 17479 17718 9 - Spl 0 64 270 +0 526 ENST00000442898 17855 18027 9 - Spl 0 64 270 +0 527 ENST00000442898 17855 18027 9 - Spl 0 52 222 +0 527 ENST00000442898 18174 18380 9 - Spl 0 52 222 +0 528 ENST00000442898 17479 17718 9 - Spl 0 64 299 +0 528 ENST00000442898 17855 18027 9 - Spl 0 64 299 +0 529 ENST00000442898 17166 17343 9 - Spl 0 64 193 +0 529 ENST00000442898 17479 17718 9 - Spl 0 64 193 +0 530 ENST00000442898 17166 17343 9 - Spl 0 65 218 +0 530 ENST00000442898 17479 17718 9 - Spl 0 65 218 +0 531 ENST00000442898 17166 17343 9 - Spl 1 63 285 +0 531 ENST00000442898 17479 17718 9 - Spl 1 63 285 +0 532 ENST00000442898 17855 18027 9 - Spl 0 35 300 +0 533 ENST00000442898 17479 17718 9 - Spl 0 67 213 +0 534 ENST00000442898 18174 18380 9 - Spl 0 60 256 +0 534 ENST00000442898 18492 24850 9 - Spl 0 60 256 +0 535 ENST00000442898 18174 18380 9 - Spl 0 60 256 +0 535 ENST00000442898 18492 24850 9 - Spl 0 60 256 +0 536 ENST00000442898 18174 18380 9 - Spl 0 60 256 +0 536 ENST00000442898 18492 24850 9 - Spl 0 60 256 +0 537 ENST00000442898 17166 17343 9 - Spl 0 63 298 +0 537 ENST00000442898 17479 17718 9 - Spl 0 63 298 +0 537 ENST00000442898 17855 18027 9 - Spl 0 63 298 +0 538 ENST00000442898 17166 17343 9 - Spl 1 65 267 +0 538 ENST00000442898 17479 17718 9 - Spl 1 65 267 +0 539 ENST00000442898 18174 18380 9 - Spl 0 69 300 +0 539 ENST00000442898 18492 24850 9 - Ret 0 69 300 +0 540 ENST00000442898 18492 24850 9 - Spl 0 58 169 +0 541 ENST00000442898 18174 18380 9 - Spl 0 59 262 +0 541 ENST00000442898 18492 24850 9 - Ret 0 59 262 +0 542 ENST00000442898 18174 18380 9 - Spl 0 59 262 +0 542 ENST00000442898 18492 24850 9 - Ret 0 59 262 +0 543 ENST00000442898 18174 18380 9 - Spl 0 59 262 +0 543 ENST00000442898 18492 24850 9 - Ret 0 59 262 +0 544 ENST00000442898 17855 18027 9 - Spl 0 35 300 +0 545 ENST00000442898 17855 18027 9 - Spl 0 35 300 +0 546 ENST00000442898 17166 17343 9 - Spl 0 59 300 +0 546 ENST00000442898 17479 17718 9 - Spl 0 59 300 +0 546 ENST00000442898 17855 18027 9 - Spl 0 59 300 +0 547 ENST00000442898 18492 24850 9 - Ret 1 60 292 +0 548 ENST00000442898 18492 24850 9 - Ret 0 60 292 +0 549 ENST00000442898 18492 24850 9 - Ret 1 57 216 +0 550 ENST00000442898 17855 18027 9 - Spl 2 60 163 +0 551 ENST00000442898 14940 15080 9 - Spl 0 48 267 +0 552 ENST00000442898 17166 17343 9 - Spl 1 63 242 +0 552 ENST00000442898 17479 17718 9 - Spl 1 63 242 +0 553 ENST00000442898 17855 18027 9 - Spl 0 51 300 +0 553 ENST00000442898 18174 18380 9 - Spl 0 51 300 +0 554 ENST00000442898 18174 18380 9 - Spl 2 65 300 +0 554 ENST00000442898 18492 24850 9 - Ret 2 65 300 +0 555 ENST00000442898 17166 17343 9 - Spl 0 59 300 +0 555 ENST00000442898 17855 18027 9 - Spl 0 59 300 +0 556 ENST00000442898 17479 17718 9 - Spl 0 62 300 +0 556 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 557 ENST00000442898 17855 18027 9 - Spl 0 53 300 +0 557 ENST00000442898 18492 24850 9 - Spl 0 53 300 +0 558 ENST00000442898 17855 18027 9 - Spl 0 53 300 +0 558 ENST00000442898 18492 24850 9 - Spl 0 53 300 +0 559 ENST00000442898 18174 18380 9 - Spl 0 57 143 +0 560 ENST00000442898 17166 17343 9 - Spl 0 59 300 +0 560 ENST00000442898 17479 17718 9 - Spl 0 59 300 +0 560 ENST00000442898 17855 18027 9 - Spl 0 59 300 +0 561 ENST00000442898 17166 17343 9 - Spl 0 59 300 +0 561 ENST00000442898 17479 17718 9 - Spl 0 59 300 +0 561 ENST00000442898 17855 18027 9 - Spl 0 59 300 +0 562 ENST00000442898 17855 18027 9 - Ret 2 36 300 +0 563 ENST00000442898 17479 17718 9 - Ret 0 61 282 +0 563 ENST00000442898 17855 18027 9 - Spl 0 61 282 +0 564 ENST00000442898 17479 17718 9 - Ret 0 61 282 +0 564 ENST00000442898 17855 18027 9 - Spl 0 61 282 +0 565 ENST00000442898 18174 18380 9 - Ret 2 56 284 +0 565 ENST00000442898 18492 24850 9 - Ret 2 56 284 +0 566 ENST00000442898 17855 18027 9 - Spl 0 51 300 +0 566 ENST00000442898 18174 18380 9 - Spl 0 51 300 +0 567 ENST00000442898 17855 18027 9 - Spl 0 51 219 +0 568 ENST00000442898 17166 17343 9 - Spl 0 68 293 +0 568 ENST00000442898 17479 17718 9 - Spl 0 68 293 +0 569 ENST00000442898 25004 29601 9 - Ret 0 63 235 +0 570 ENST00000442898 17479 17718 9 - Spl 0 62 202 +0 570 ENST00000442898 17855 18027 9 - Spl 0 62 202 +0 571 ENST00000442898 18174 18380 9 - Ret 2 41 288 +0 572 ENST00000442898 17166 17343 9 - Spl 1 63 242 +0 572 ENST00000442898 17479 17718 9 - Spl 1 63 242 +0 573 ENST00000442898 17166 17343 9 - Spl 0 63 298 +0 573 ENST00000442898 17479 17718 9 - Spl 0 63 298 +0 573 ENST00000442898 17855 18027 9 - Spl 0 63 298 +0 574 ENST00000442898 18174 18380 9 - Spl 0 60 256 +0 574 ENST00000442898 18492 24850 9 - Spl 0 60 256 +0 575 ENST00000442898 18174 18380 9 - Spl 1 49 300 +0 576 ENST00000442898 16061 16717 9 - Ret 1 52 300 +0 577 ENST00000442898 18174 18380 9 - Spl 0 60 256 +0 577 ENST00000442898 18492 24850 9 - Spl 0 60 256 +0 578 ENST00000442898 17855 18027 9 - Spl 1 53 300 +0 578 ENST00000442898 18492 24850 9 - Spl 1 53 300 +0 579 ENST00000442898 17855 18027 9 - Spl 1 47 248 +0 579 ENST00000442898 18174 18380 9 - Spl 1 47 248 +0 580 ENST00000442898 17855 18027 9 - Spl 1 47 248 +0 580 ENST00000442898 18174 18380 9 - Spl 1 47 248 +0 581 ENST00000442898 18174 18380 9 - Spl 0 54 300 +0 581 ENST00000442898 18492 24850 9 - Ret 0 54 300 +0 582 ENST00000442898 18174 18380 9 - Spl 0 54 300 +0 582 ENST00000442898 18492 24850 9 - Ret 0 54 300 +0 583 ENST00000442898 16061 16717 9 - Spl 1 48 273 +0 584 ENST00000442898 17166 17343 9 - Spl 1 60 298 +0 584 ENST00000442898 17479 17718 9 - Spl 1 60 298 +0 584 ENST00000442898 17855 18027 9 - Spl 1 60 298 +0 585 ENST00000442898 18492 24850 9 - Spl 0 58 169 +0 586 ENST00000442898 17855 18027 9 - Spl 0 48 300 +0 586 ENST00000442898 18174 18380 9 - Ret 0 48 300 +0 587 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 587 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 588 ENST00000442898 15149 15908 9 - Spl 0 38 268 +0 588 ENST00000442898 16061 16717 9 - Ret 0 38 268 +0 589 ENST00000442898 17479 17718 9 - Spl 1 65 300 +0 589 ENST00000442898 17855 18027 9 - Spl 1 65 300 +0 590 ENST00000442898 17479 17718 9 - Ret 0 45 213 +0 590 ENST00000442898 17855 18027 9 - Ret 0 45 213 +0 591 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 591 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 592 ENST00000442898 17166 17343 9 - Spl 0 62 298 +0 592 ENST00000442898 17855 18027 9 - Spl 0 62 298 +0 593 ENST00000442898 17479 17718 9 - Spl 0 66 300 +0 593 ENST00000442898 18174 18380 9 - Spl 0 66 300 +0 594 ENST00000442898 17479 17718 9 - Spl 0 60 299 +0 594 ENST00000442898 17855 18027 9 - Spl 0 60 299 +0 595 ENST00000442898 17479 17718 9 - Spl 0 62 300 +0 595 ENST00000442898 17855 18027 9 - Spl 0 62 300 +0 596 ENST00000442898 18492 24850 9 - Ret 0 45 118 +0 597 ENST00000442898 17479 17718 9 - Ret 2 59 300 +0 597 ENST00000442898 17855 18027 9 - Ret 2 59 300 +0 598 ENST00000442898 17166 17343 9 - Spl 1 68 242 +0 598 ENST00000442898 17479 17718 9 - Spl 1 68 242 +0 599 ENST00000442898 16061 16717 9 - Ret 0 51 295 +0 600 ENST00000442898 16061 16717 9 - Ret 0 51 295 +0 601 ENST00000442898 17166 17343 9 - Spl 0 62 300 +0 601 ENST00000442898 17479 17718 9 - Spl 0 62 300 +0 602 ENST00000442898 17166 17343 9 - Spl 0 68 293 +0 602 ENST00000442898 17479 17718 9 - Spl 0 68 293 +0 603 ENST00000442898 18174 18380 9 - Spl 1 60 256 +0 603 ENST00000442898 18492 24850 9 - Spl 1 60 256 +0 604 ENST00000442898 17166 17343 9 - Spl 0 60 300 +0 604 ENST00000442898 17479 17718 9 - Spl 0 60 300 +0 604 ENST00000442898 17855 18027 9 - Spl 0 60 300 +0 605 ENST00000442898 17166 17343 9 - Spl 0 60 300 +0 605 ENST00000442898 17479 17718 9 - Spl 0 60 300 +0 605 ENST00000442898 17855 18027 9 - Spl 0 60 300 +0 606 ENST00000442898 18174 18380 9 - Ret 1 56 284 +0 606 ENST00000442898 18492 24850 9 - Ret 1 56 284 +0 607 ENST00000442898 17479 17718 9 - Ret 0 63 197 +0 607 ENST00000442898 17855 18027 9 - Spl 0 63 197 +0 608 ENST00000442898 17479 17718 9 - Spl 0 64 270 +0 608 ENST00000442898 17855 18027 9 - Spl 0 64 270 +0 609 ENST00000442898 16061 16717 9 - Ret 0 51 295 +0 610 ENST00000442898 16061 16717 9 - Ret 0 51 295 +0 611 ENST00000442898 18174 18380 9 - Spl 1 57 299 +0 611 ENST00000442898 18492 24850 9 - Ret 1 57 299 +0 612 ENST00000442898 16061 16717 9 - Ret 0 68 300 +0 613 ENST00000442898 17166 17343 9 - Spl 0 65 218 +0 613 ENST00000442898 17479 17718 9 - Spl 0 65 218 +0 614 ENST00000442898 14940 15080 9 - Spl 0 48 267 +0 615 ENST00000442898 17166 17343 9 - Spl 1 65 267 +0 615 ENST00000442898 17479 17718 9 - Spl 1 65 267 +0 616 ENST00000442898 18492 24850 9 - Ret 0 60 292 +0 617 ENST00000442898 18492 24850 9 - Ret 0 60 292 +0 618 ENST00000442898 18174 18380 9 - Ret 0 67 297 +0 619 ENST00000442898 18492 24850 9 - Ret 0 60 292 +0 620 ENST00000442898 18174 18380 9 - Spl 0 59 262 +0 620 ENST00000442898 18492 24850 9 - Ret 0 59 262 +0 621 ENST00000442898 18174 18380 9 - Ret 0 52 281 +0 622 ENST00000442898 17479 17718 9 - Spl 0 63 192 +0 622 ENST00000442898 17855 18027 9 - Spl 0 63 192 +0 623 ENST00000442898 17479 17718 9 - Spl 0 60 292 +0 623 ENST00000442898 17855 18027 9 - Spl 0 60 292 +0 624 ENST00000442898 17479 17718 9 - Ret 0 45 213 +0 624 ENST00000442898 17855 18027 9 - Ret 0 45 213 +0 625 ENST00000442898 18174 18380 9 - Ret 0 52 281 +0 626 ENST00000442898 17166 17343 9 - Spl 0 63 298 +0 626 ENST00000442898 17479 17718 9 - Spl 0 63 298 +0 626 ENST00000442898 17855 18027 9 - Spl 0 63 298 +0 627 ENST00000442898 25004 29601 9 - Ret 0 63 235 +0 628 ENST00000442898 17855 18027 9 - Spl 0 48 300 +0 628 ENST00000442898 18174 18380 9 - Ret 0 48 300 +0 629 ENST00000442898 17479 17718 9 - Spl 1 65 251 +0 629 ENST00000442898 17855 18027 9 - Spl 1 65 251 +0 630 ENST00000442898 18174 18380 9 - Spl 0 60 271 +0 630 ENST00000442898 18492 24850 9 - Ret 0 60 271 +0 631 ENST00000442898 18492 24850 9 - Spl 0 57 153 +0 632 ENST00000442898 18492 24850 9 - Ret 0 59 214 +0 633 ENST00000442898 17479 17718 9 - Ret 0 61 282 +0 633 ENST00000442898 17855 18027 9 - Spl 0 61 282 +0 634 ENST00000442898 17479 17718 9 - Ret 0 61 282 +0 634 ENST00000442898 17855 18027 9 - Spl 0 61 282 +0 635 ENST00000442898 17479 17718 9 - Spl 1 65 262 +0 635 ENST00000442898 17855 18027 9 - Spl 1 65 262 +0 636 ENST00000442898 17479 17718 9 - Spl 0 62 293 +0 636 ENST00000442898 17855 18027 9 - Spl 0 62 293 +0 637 ENST00000442898 18174 18380 9 - Spl 0 59 262 +0 637 ENST00000442898 18492 24850 9 - Ret 0 59 262 +0 638 ENST00000442898 18492 24850 9 - Ret 0 60 292 +0 639 ENST00000442898 17166 17343 9 - Spl 0 63 285 +0 639 ENST00000442898 17479 17718 9 - Spl 0 63 285 +0 640 ENST00000442898 15149 15908 9 - Spl 0 40 132 +0 641 ENST00000442898 18174 18380 9 - Spl 0 64 272 +0 641 ENST00000442898 18492 24850 9 - Ret 0 64 272 +0 642 ENST00000442898 17479 17718 9 - Ret 2 59 300 +0 642 ENST00000442898 17855 18027 9 - Ret 2 59 300 +0 643 ENST00000442898 17479 17718 9 - Spl 0 67 299 +0 643 ENST00000442898 17855 18027 9 - Spl 0 67 299 +0 644 ENST00000442898 18492 24850 9 - Ret 1 57 216 +0 645 ENST00000442898 17166 17343 9 - Spl 1 68 242 +0 645 ENST00000442898 17479 17718 9 - Spl 1 68 242 +0 646 ENST00000442898 17479 17718 9 - Ret 0 61 282 +0 646 ENST00000442898 17855 18027 9 - Spl 0 61 282 +0 647 ENST00000442898 17479 17718 9 - Ret 0 61 282 +0 647 ENST00000442898 17855 18027 9 - Spl 0 61 282 +0 648 ENST00000442898 18174 18380 9 - Spl 1 57 299 +0 648 ENST00000442898 18492 24850 9 - Ret 1 57 299 +0 649 ENST00000442898 17855 18027 9 - Ret 2 36 300 +0 650 ENST00000442898 17479 17718 9 - Spl 0 63 192 +0 650 ENST00000442898 17855 18027 9 - Spl 0 63 192 +0 651 ENST00000442898 17855 18027 9 - Spl 0 35 300 +0 652 ENST00000442898 18174 18380 9 - Spl 0 57 277 +0 652 ENST00000442898 18492 24850 9 - Ret 0 57 277 diff --git a/tests/test_all_introns_counts_and_info.py b/tests/test_all_introns_counts_and_info.py index 5213d91..ca2f111 100644 --- a/tests/test_all_introns_counts_and_info.py +++ b/tests/test_all_introns_counts_and_info.py @@ -20,10 +20,10 @@ @pytest.mark.parametrize( ("file_path"), [ - pytest.param(BAM_DIR / "sorted_assigned" / "d0_0hr1_filtered_remapped_sorted.sorted.assigned.bam", id="file 1"), pytest.param( - BAM_DIR / "sorted_assigned" / "d0_no4sU_filtered_remapped_sorted.sorted.assigned.bam", id="file 2" + BAM_DIR / "sorted_assigned" / "d0_no4sU_filtered_remapped_sorted.sorted.assigned.bam", id="file 1" ), + pytest.param(BAM_DIR / "sorted_assigned" / "d0_0hr1_filtered_remapped_sorted.sorted.assigned.bam", id="file 2"), ], ) def test_main(file_path: Path, tmp_path: Path, regtest) -> None: From b8fec60862134825178568605a6fd5e2c797bedb Mon Sep 17 00:00:00 2001 From: Neil Shephard Date: Fri, 6 Dec 2024 14:59:15 +0000 Subject: [PATCH 2/5] feature(isoslam): Adds functions to extract features from reads Closes #88 Adds functions to extract features from a read both individual `pysam.AlignedSegment` and pairs of reads returned from the `pysam.fetch()` iterator. - Includes tests. - Extracts - `start` - `end` - `length` - tag for `XS` if present, otherwise `None` - tag for `XT` if present, otherwise `None` - zips up the blocks and returns them as `block_start` and `block_end` Tests use fixtures defined in `tests/conftest.py` and I had trouble trying to moock `pysam.AlignedSegment` as a number of the attributes I wanted to mock were immutable. I therefore opted to load a `.bam` file and extract some individual `AlignedSegments` as features and use these in the parameterised tests. This is done for both unsorted/unassigned and sorted/assigned files. --- isoslam/isoslam.py | 85 +++- tests/conftest.py | 82 ++++ .../d0_no4sU_filtered_remapped_sorted.bam.bai | Bin 0 -> 128 bytes tests/test_isoslam.py | 364 ++++++++++++++++++ 4 files changed, 529 insertions(+), 2 deletions(-) create mode 100644 tests/conftest.py create mode 100644 tests/resources/bam/d0_no4sU_filtered_remapped_sorted.bam.bai diff --git a/isoslam/isoslam.py b/isoslam/isoslam.py index 843cac7..372cf71 100644 --- a/isoslam/isoslam.py +++ b/isoslam/isoslam.py @@ -5,6 +5,7 @@ from typing import Any from loguru import logger +from pysam import AlignedSegment from isoslam import io @@ -53,8 +54,8 @@ def extract_strand_transcript(gtf_file: str | Path) -> tuple[defaultdict[Any, An Returns ------- tuple[dict[str, tuple[str]], dict[str, tuple[str]]] - Two dictionaries are returned, one of the ``strand`` the other of the ``transcript_id`` both using the ``gene_id`` as - the key. + Two dictionaries are returned, one of the ``strand`` the other of the ``transcript_id`` both using the + ``gene_id`` as the key. """ strand = defaultdict(str) transcript = defaultdict(list) @@ -65,3 +66,83 @@ def extract_strand_transcript(gtf_file: str | Path) -> tuple[defaultdict[Any, An transcript[entry.gene_id].append(entry.transcript_id) logger.info(f"Extracted features from : {gtf_file}") return (strand, transcript) + + +def extract_features_from_read(read: AlignedSegment) -> dict[str, int | str | None | tuple[int, int]]: + """ + Extract start, end and length from an aligned segment read. + + Parameters + ---------- + read : AlignedSegment + An aligned segment read from ``pysam``. + + Returns + ------- + dict[str, Any] + Dictionary of ``start``, ``end`` and ``length`` of the segment. + """ + block_start, block_end = zip(*read.get_blocks()) + try: + status = read.get_tag("XS") + except KeyError: + status = None + try: + transcript = read.get_tag("XT") + except KeyError: + transcript = None + return { + "start": read.reference_start, + "end": read.reference_end, + "length": read.reference_length, + "status": status, + "transcript": transcript, + "block_start": block_start, + "block_end": block_end, + } + + +def extract_features_from_pair(pair: list[AlignedSegment]) -> dict[str, dict[str, Any]]: + """ + Extract features from a pair of reads. + + Parameters + ---------- + pair : list[AlignedSegment] + A list of two aligned segments from ``pysam``. + + Returns + ------- + dic[str, dict[str, Any]] + Returns a nested dictionaries of the ``start``, ``end`` and ``length`` of each read. + """ + return { + "read1": extract_features_from_read(pair[0]), + "read2": extract_features_from_read(pair[1]), + } + + +# def extract_utron(read: AlignedSegment, transcript_to_gene: Any, tag: str = "XS") -> list | None: +# """ +# Extract and sum the utrons based on tag. + +# ACTION : This function needs better documentation, my guess is that its extracting the transcripts to genes and +# then getting some related information (what I'm not sure) from the .bed file and adding these up. + +# Parameters +# ---------- +# read : AlignedSegement +# An aligned segment read. +# transcript_to_gene : TextIO +# Transcript to gene from a ``.bed`` file. +# tag : str +# Type of tag to extract. + +# Returns +# ------- +# list | None +# List of the length of assigned regions. +# """ +# if read.get_tag(tag) == "Assigned": +# return sum(bed_file[transcript] for transcript in tx2gene[read.get_tag("XT")]) +# return None diff --git a/tests/conftest.py b/tests/conftest.py new file mode 100644 index 0000000..9919bd2 --- /dev/null +++ b/tests/conftest.py @@ -0,0 +1,82 @@ +"""Fixtures for pytest.""" + +from pathlib import Path + +import pytest +from pysam import AlignedSegment, AlignmentFile + +from isoslam import io + +BASE_DIR = Path.cwd() +TEST_DIR = BASE_DIR / "tests" +RESOURCES = TEST_DIR / "resources" +GTF_DIR = RESOURCES / "gtf" +BED_DIR = RESOURCES / "bed" +VCF_DIR = RESOURCES / "vcf" +BAM_DIR = RESOURCES / "bam" + + +# pylint: disable=redefined-outer-name + + +@pytest.fixture() +def bam_file() -> AlignmentFile: + """Load a bam file.""" + return io.load_file(BAM_DIR / "d0_no4sU_filtered_remapped_sorted.bam") + + +@pytest.fixture() +def bam_file2() -> AlignmentFile: + """Load a bam file.""" + return io.load_file(BAM_SORTED_ASSIGNED_DIR / "d0_0hr1_filtered_remapped_sorted.sorted.assigned.bam") + + +@pytest.fixture() +def bam_unaligned_file1() -> AlignmentFile: + """Load an unsorted and unassigned ``.bam`` file (ignore the filename!).""" + return io.load_file(BAM_DIR / "d0_no4sU_filtered_remapped_sorted.bam") + + +@pytest.fixture() +def aligned_segment_unassigned_28584(bam_unaligned_file1: AlignmentFile) -> AlignedSegment: + """Extract an individual AlignedSegment from a ``.bam`` file.""" + # NB : .fetch() returns AlignedSegments that span the start and end region, not just those within + return next(bam_unaligned_file1.fetch(contig="chr9", start=28592, end=28593)) + + +@pytest.fixture() +def aligned_segment_unassigned_17416(bam_unaligned_file1: AlignmentFile) -> AlignedSegment: + """Extract an individual AlignedSegment from a ``.bam`` file.""" + # NB : .fetch() returns AlignedSegments that span the start and end region, not just those within + return next(bam_unaligned_file1.fetch(contig="chr9", start=17804, end=18126)) + + +@pytest.fixture() +def aligned_segment_unassigned_18029(bam_unaligned_file1: AlignmentFile) -> AlignedSegment: + """Extract an individual AlignedSegment from a ``.bam`` file.""" + # NB : .fetch() returns AlignedSegments that span the start and end region, not just those within + return next(bam_unaligned_file1.fetch(contig="chr9", start=18156, end=24870)) + + +@pytest.fixture() +def bam_sorted_assigned_file() -> list[AlignedSegment]: + """Return a list of a ``AlignedSegment`` from a ``.bam`` file that has been sorted and assigned.""" + return list(io.load_file(BAM_SORTED_ASSIGNED_DIR / "d0_no4sU_filtered_remapped_sorted.sorted.assigned.bam")) + + +@pytest.fixture() +def aligned_segment_assigned_15967(bam_sorted_assigned_file: list[AlignedSegment]) -> AlignedSegment: + """Return a single assigned AlignedSegment where start is 15967.""" + return [x for x in bam_sorted_assigned_file if x.reference_start == 15967][0] + + +@pytest.fixture() +def aligned_segment_assigned_14770(bam_sorted_assigned_file: list[AlignedSegment]) -> AlignedSegment: + """Return a single assigned AlignedSegment where start is 14770.""" + return [x for x in bam_sorted_assigned_file if x.reference_start == 14770][0] + + +@pytest.fixture() +def aligned_segment_assigned_17814(bam_sorted_assigned_file: list[AlignedSegment]) -> AlignedSegment: + """Return a single assigned AlignedSegment where start is 17814.""" + return [x for x in bam_sorted_assigned_file if x.reference_start == 17814][0] diff --git a/tests/resources/bam/d0_no4sU_filtered_remapped_sorted.bam.bai b/tests/resources/bam/d0_no4sU_filtered_remapped_sorted.bam.bai new file mode 100644 index 0000000000000000000000000000000000000000..8b1c40d57ca041919cb3096a493f3ac5010757b2 GIT binary patch literal 128 zcmZ>A^kigYU|?VdVoxCk1`wNp!IB9?s<6uHgJ>_PIE=5>tgr|yK8b+=tPrXmCccFg OB#QvZYG7utL8Spfvj`9X literal 0 HcmV?d00001 diff --git a/tests/test_isoslam.py b/tests/test_isoslam.py index 985c56e..2784fdf 100644 --- a/tests/test_isoslam.py +++ b/tests/test_isoslam.py @@ -10,6 +10,9 @@ BASE_DIR = Path.cwd() RESOURCES = BASE_DIR / "tests" / "resources" +# pylint: disable=too-many-arguments +# pylint: disable=too-many-positional-arguments + @pytest.mark.parametrize( ("bed_file", "expected_transcript"), @@ -60,3 +63,364 @@ def test_extract_strand_transcript( strand, transcript = isoslam.extract_strand_transcript(gtf_file) assert strand == expected_strand assert transcript == expected_transcript + + +@pytest.mark.parametrize( + ("aligned_segment", "start", "end", "length", "status", "transcript", "block_start", "block_end"), + [ + pytest.param( # type: ignore[misc] + "aligned_segment_28584", + 28584, + 28733, + 149, + None, + None, + (28584, 28704), + (28704, 28733), + id="28584 - Assignment and Transcript are None", + ), + pytest.param( + "aligned_segment_17416", + 17416, + 17805, + 389, + "Assigned", + "Something", + (17416, 17718), + (17479, 17805), + id="17416 - Assignment and Transcript are None", + marks=pytest.mark.xfail(reasion="Not getting Assigned or Transcript tags for some reason?"), + ), + pytest.param( + "aligned_segment_18029", + 18029, + 18385, + 356, + "Assigned", + "something", + (18029, 18380), + (18174, 18385), + id="17416 - Assignment and Transcript are None", + marks=pytest.mark.xfail(reasion="Not getting Assigned tag for some reason?"), + ), + ], +) +def test_extract_features_from_read_param( + aligned_segment: str, + start: int, + end: int, + length: int, + status: str, + transcript: str, + block_start: tuple[int, int], + block_end: tuple[int, int], + request: pytest.FixtureRequest, +) -> None: + """Test extract of features from an aligned segment read.""" + segment = isoslam.extract_features_from_read(request.getfixturevalue(aligned_segment)) + assert isinstance(segment, dict) + assert segment["start"] == start + assert segment["end"] == end + assert segment["length"] == length + assert segment["status"] == status + assert segment["transcript"] == transcript + assert segment["block_start"] == block_start + assert segment["block_end"] == block_end + + +<<<<<<< HEAD +@pytest.mark.parametrize( + ("aligned_segment1", "aligned_segment2", "expected"), + [ + pytest.param( # type: ignore[misc] + "aligned_segment_28584", + "aligned_segment_17416", + { + "read1": { + "start": 28584, + "end": 28733, + "length": 149, + "status": None, + "transcript": None, + "block_start": (28584, 28704), + "block_end": (28704, 28733), + }, + "read2": { + "start": 17416, + "end": 17805, + "length": 389, + "status": None, + "transcript": None, + "block_start": (17416, 17718), + "block_end": (17479, 17805), + }, + }, + id="28584 and 17416 - Assignment and Transcript are None", + ), + ], +) +def test_extract_features_from_pair( + aligned_segment1: str, + aligned_segment2: str, + expected: dict[str, dict[str, int | None | str | tuple[int, int]]], + request: pytest.FixtureRequest, +) -> None: + """Test extract of features from a list of pairs.""" + read_pair = isoslam.extract_features_from_pair( + [ + request.getfixturevalue(aligned_segment1), + request.getfixturevalue(aligned_segment2), + ] + ) + assert isinstance(read_pair, dict) + assert read_pair == expected +||||||| parent of 3878e7a (fixup! feature(isoslam): Adds functions to extract features from reads) +# @pytest.mark.parametrize( +# ("aligned_segment", "start", "end", "length", "status", "transcript", "block_start", "block_end"), +# [ +# pytest.param( # type: ignore[misc] +# "aligned_segment_28584", +# 28584, +# 28733, +# 149, +# None, +# None, +# (28584, 28704), +# (28704, 28733), +# id="28584 - Assignment and Transcript are None", +# ), +# pytest.param( +# "aligned_segment_17416", +# 17416, +# 17805, +# 389, +# "Assigned", +# "Something", +# (17416, 17718), +# (17479, 17805), +# id="17416 - Assignment and Transcript are None", +# marks=pytest.mark.xfail(reasion="Not getting Assigned or Transcript tags for some reason?"), +# ), +# pytest.param( +# "aligned_segment_18029", +# 18029, +# 18385, +# 356, +# "Assigned", +# "something", +# (18029, 18380), +# (18174, 18385), +# id="17416 - Assignment and Transcript are None", +# marks=pytest.mark.xfail(reasion="Not getting Assigned tag for some reason?"), +# ), +# ], +# ) +# def test_extract_features_from_read_param( +# aligned_segment: str, +# start: int, +# end: int, +# length: int, +# status: str, +# transcript: str, +# block_start: tuple[int, int], +# block_end: tuple[int, int], +# request: pytest.FixtureRequest, +# ) -> None: +# """Test extract of features from an aligned segment read.""" +# segment = isoslam.extract_features_from_read(request.getfixturevalue(aligned_segment)) +# assert isinstance(segment, dict) +# assert segment["start"] == start +# assert segment["end"] == end +# assert segment["length"] == length +# assert segment["status"] == status +# assert segment["transcript"] == transcript +# assert segment["block_start"] == block_start +# assert segment["block_end"] == block_end + + +# @pytest.mark.parametrize( +# ("aligned_segment1", "aligned_segment2", "expected"), +# [ +# pytest.param( # type: ignore[misc] +# "aligned_segment_28584", +# "aligned_segment_17416", +# { +# "read1": { +# "start": 28584, +# "end": 28733, +# "length": 149, +# "status": None, +# "transcript": None, +# "block_start": (28584, 28704), +# "block_end": (28704, 28733), +# }, +# "read2": { +# "start": 17416, +# "end": 17805, +# "length": 389, +# "status": None, +# "transcript": None, +# jls_extract_var: (17416, 17718), +# "block_end": (17479, 17805), +# }, +# }, +# id="28584 and 17416 - Assignment and Transcript are None", +# ), +# ], +# ) +# def test_extract_features_from_pair( +# aligned_segment1: str, +# aligned_segment2: str, +# expected: dict[str, dict[str, int | None | str | tuple[int, int]]], +# request: pytest.FixtureRequest, +# ) -> None: +# """Test extract of features from a list of pairs.""" +# read_pair = isoslam.extract_features_from_pair( +# [ +# request.getfixturevalue(aligned_segment1), +# request.getfixturevalue(aligned_segment2), +# ] +# ) +# assert isinstance(read_pair, dict) +# assert read_pair == expected +======= +@pytest.mark.parametrize( + ("aligned_segment", "start", "end", "length", "status", "transcript", "block_start", "block_end"), + [ + pytest.param( # type: ignore[misc] + "aligned_segment_unassigned_28584", + 28584, + 28733, + 149, + None, + None, + (28584, 28704), + (28704, 28733), + id="28584 - Assignment and Transcript are None", + ), + pytest.param( + "aligned_segment_unassigned_17416", + 17416, + 17805, + 389, + None, + None, + (17416, 17718), + (17479, 17805), + id="17416 - Assignment and Transcript are None", + ), + pytest.param( + "aligned_segment_unassigned_18029", + 18029, + 18385, + 356, + None, + None, + (18029, 18380), + (18174, 18385), + id="18029 - Assignment and Transcript are None", + ), + pytest.param( + "aligned_segment_assigned_17814", + 17814, + 18136, + 322, + "Assigned", + "MSTRG.63147", + (17814, 18027), + (17855, 18136), + id="17814 - Assigned to MSTRG.63147", + ), + pytest.param( + "aligned_segment_assigned_14770", + 14770, + 14876, + 106, + "Assigned", + "MSTRG.63147", + (14770,), + (14876,), + id="14770 - Assigned to MSTRG.63147", + ), + pytest.param( + "aligned_segment_assigned_15967", + 15967, + 16117, + 150, + "Assigned", + "MSTRG.63147", + (15967,), + (16117,), + id="15967 - Assigned to MSTRG.63147", + ), + ], +) +def test_extract_features_from_read( + aligned_segment: str, + start: int, + end: int, + length: int, + status: str, + transcript: str, + block_start: tuple[int, int], + block_end: tuple[int, int], + request: pytest.FixtureRequest, +) -> None: + """Test extract of features from an unassigned and assigned segment reads.""" + segment = isoslam.extract_features_from_read(request.getfixturevalue(aligned_segment)) + assert isinstance(segment, dict) + assert segment["start"] == start + assert segment["end"] == end + assert segment["length"] == length + assert segment["status"] == status + assert segment["transcript"] == transcript + assert segment["block_start"] == block_start + assert segment["block_end"] == block_end + + +@pytest.mark.parametrize( + ("aligned_segment1", "aligned_segment2", "expected"), + [ + pytest.param( # type: ignore[misc] + "aligned_segment_assigned_17814", + "aligned_segment_assigned_14770", + { + "read1": { + "start": 17814, + "end": 18136, + "length": 322, + "status": "Assigned", + "transcript": "MSTRG.63147", + "block_start": (17814, 18027), + "block_end": (17855, 18136), + }, + "read2": { + "start": 14770, + "end": 14876, + "length": 106, + "status": "Assigned", + "transcript": "MSTRG.63147", + "block_start": (14770,), + "block_end": (14876,), + }, + }, + id="28584 and 17416 - Assignment and Transcript are None", + ), + ], +) +def test_extract_features_from_pair( + aligned_segment1: str, + aligned_segment2: str, + expected: dict[str, dict[str, int | None | str | tuple[int, int]]], + request: pytest.FixtureRequest, +) -> None: + """Test extract of features from a list of pairs.""" + read_pair = isoslam.extract_features_from_pair( + [ + request.getfixturevalue(aligned_segment1), + request.getfixturevalue(aligned_segment2), + ] + ) + assert isinstance(read_pair, dict) + assert read_pair == expected +>>>>>>> 3878e7a (fixup! feature(isoslam): Adds functions to extract features from reads) From 2123dadbfbc82be08bcb26eb724d37ebef9f5155 Mon Sep 17 00:00:00 2001 From: Neil Shephard Date: Mon, 9 Dec 2024 16:18:37 +0000 Subject: [PATCH 3/5] feature(isoslam): Adds extract_segment_pair() function This function reads through a `.bam` file, which should already have been sorted and assigned, and produces pairs of reads. --- docs/source/workflow.md | 10 ++ isoslam/isoslam.py | 32 ++++++ tests/conftest.py | 6 +- tests/test_isoslam.py | 232 ++++++++++++++++++++++++++++++---------- 4 files changed, 222 insertions(+), 58 deletions(-) diff --git a/docs/source/workflow.md b/docs/source/workflow.md index ec8be43..3f77adf 100644 --- a/docs/source/workflow.md +++ b/docs/source/workflow.md @@ -56,6 +56,16 @@ graph TD; ``` +## IsoSLAM + +A number of pre-processing steps are undertaken prior to IsoSLAM work being done. The following is work in progress as +the code is refactored. + +1. Iterate over `.bam` file and pair segments. If two or more `AlignedSegments` with the same `query_name` are found + then `n > 1` segments are dropped. +2. Pairs of segments (individual `AlignedSegments`) are then assessed and if they are `Assigned` the `start`, `end`, + `length`, `status` (i.e. `Assigned`), `transcript_id`, `block_start` and `block_end` are extracted. + ## Updating The above diagram is written in [Mermaid][mermaid]. You can view the source code in the IsoSLAM repository and diff --git a/isoslam/isoslam.py b/isoslam/isoslam.py index 372cf71..428d6e8 100644 --- a/isoslam/isoslam.py +++ b/isoslam/isoslam.py @@ -1,6 +1,7 @@ """IsoSLAM module.""" from collections import defaultdict +from collections.abc import Generator from pathlib import Path from typing import Any @@ -68,6 +69,37 @@ def extract_strand_transcript(gtf_file: str | Path) -> tuple[defaultdict[Any, An return (strand, transcript) +def extract_segment_pairs(bam_file: str | Path) -> Generator[AlignedSegment]: + """ + Extract pairs of AlignedSegments from a ``.bam`` file. + + When there are two adjacent ``AlignedSegments`` with the same ``query_name`` only the first is paired, subsequent + segments are dropped. + + Parameters + ---------- + bam_file : str | Path + Path to a ``.bam`` file. + + Yields + ------ + Generator + Itterable of paired segments. + """ + previous_read: str | None = None + pair: list[AlignedSegment] = [] + for read in io.load_file(bam_file): + # Return pairs of reads, i.e. not on first pass, nor if query_name matches the previous read + if previous_read is not None and previous_read != read.query_name: + yield pair + pair = [] + previous_read = read.query_name + previous_read = read.query_name + pair.append(read) + # Don't forget to return the last pair! + yield pair + + def extract_features_from_read(read: AlignedSegment) -> dict[str, int | str | None | tuple[int, int]]: """ Extract start, end and length from an aligned segment read. diff --git a/tests/conftest.py b/tests/conftest.py index 9919bd2..3bbb4fa 100644 --- a/tests/conftest.py +++ b/tests/conftest.py @@ -14,15 +14,15 @@ BED_DIR = RESOURCES / "bed" VCF_DIR = RESOURCES / "vcf" BAM_DIR = RESOURCES / "bam" - +BAM_SORTED_ASSIGNED_DIR = BAM_DIR / "sorted_assigned" # pylint: disable=redefined-outer-name @pytest.fixture() -def bam_file() -> AlignmentFile: +def bam_file1() -> AlignmentFile: """Load a bam file.""" - return io.load_file(BAM_DIR / "d0_no4sU_filtered_remapped_sorted.bam") + return io.load_file(BAM_SORTED_ASSIGNED_DIR / "d0_no4sU_filtered_remapped_sorted.sorted.assigned.bam") @pytest.fixture() diff --git a/tests/test_isoslam.py b/tests/test_isoslam.py index 2784fdf..07ab3b3 100644 --- a/tests/test_isoslam.py +++ b/tests/test_isoslam.py @@ -1,6 +1,7 @@ """Tests for the isoslam module.""" from pathlib import Path +from types import GeneratorType from typing import Any import pytest # type: ignore[import-not-found] @@ -9,6 +10,11 @@ BASE_DIR = Path.cwd() RESOURCES = BASE_DIR / "tests" / "resources" +BAM_DIR = RESOURCES / "bam" +BED_DIR = RESOURCES / "bed" +GTF_DIR = RESOURCES / "gtf" +VCF_DIR = RESOURCES / "vcf" +BAM_SORTED_ASSIGNED_DIR = BAM_DIR / "sorted_assigned" # pylint: disable=too-many-arguments # pylint: disable=too-many-positional-arguments @@ -18,7 +24,7 @@ ("bed_file", "expected_transcript"), [ pytest.param( # type: ignore[misc] - RESOURCES / "bed" / "test_coding_introns.bed", + BED_DIR / "test_coding_introns.bed", { "ENST00000442898": [ ("9", 14940, 15080, "ENST00000442898", "-"), @@ -49,7 +55,7 @@ def test_isoslam_extract_transcripts( ("gtf_file", "expected_strand", "expected_transcript"), [ pytest.param( # type: ignore[misc] - RESOURCES / "gtf" / "test_wash1.gtf", + GTF_DIR / "test_wash1.gtf", {"MSTRG.63147": "-"}, {"MSTRG.63147": ["ENST00000442898"]}, id="gtf file as Path", @@ -66,68 +72,28 @@ def test_extract_strand_transcript( @pytest.mark.parametrize( - ("aligned_segment", "start", "end", "length", "status", "transcript", "block_start", "block_end"), + ("bam_file", "expected_length"), [ pytest.param( # type: ignore[misc] - "aligned_segment_28584", - 28584, - 28733, - 149, - None, - None, - (28584, 28704), - (28704, 28733), - id="28584 - Assignment and Transcript are None", + BAM_SORTED_ASSIGNED_DIR / "d0_no4sU_filtered_remapped_sorted.sorted.assigned.bam", + 710, + id="file 1", ), pytest.param( - "aligned_segment_17416", - 17416, - 17805, - 389, - "Assigned", - "Something", - (17416, 17718), - (17479, 17805), - id="17416 - Assignment and Transcript are None", - marks=pytest.mark.xfail(reasion="Not getting Assigned or Transcript tags for some reason?"), - ), - pytest.param( - "aligned_segment_18029", - 18029, - 18385, - 356, - "Assigned", - "something", - (18029, 18380), - (18174, 18385), - id="17416 - Assignment and Transcript are None", - marks=pytest.mark.xfail(reasion="Not getting Assigned tag for some reason?"), + BAM_SORTED_ASSIGNED_DIR / "d0_0hr1_filtered_remapped_sorted.sorted.assigned.bam", + 1845, + id="file 2", ), ], ) -def test_extract_features_from_read_param( - aligned_segment: str, - start: int, - end: int, - length: int, - status: str, - transcript: str, - block_start: tuple[int, int], - block_end: tuple[int, int], - request: pytest.FixtureRequest, -) -> None: - """Test extract of features from an aligned segment read.""" - segment = isoslam.extract_features_from_read(request.getfixturevalue(aligned_segment)) - assert isinstance(segment, dict) - assert segment["start"] == start - assert segment["end"] == end - assert segment["length"] == length - assert segment["status"] == status - assert segment["transcript"] == transcript - assert segment["block_start"] == block_start - assert segment["block_end"] == block_end +def test_extract_segment_pairs(bam_file: str | Path, expected_length: int) -> None: + """Test extraction of paired segments from a sorted and assigned ``.bam`` file.""" + alignment_file = isoslam.extract_segment_pairs(bam_file) + assert isinstance(alignment_file, GeneratorType) + assert len(list(alignment_file)) == expected_length +<<<<<<< HEAD <<<<<<< HEAD @pytest.mark.parametrize( ("aligned_segment1", "aligned_segment2", "expected"), @@ -424,3 +390,159 @@ def test_extract_features_from_pair( assert isinstance(read_pair, dict) assert read_pair == expected >>>>>>> 3878e7a (fixup! feature(isoslam): Adds functions to extract features from reads) +||||||| parent of 3ee6aa7 (feature(isoslam): Adds extract_segment_pair() function) +@pytest.mark.parametrize( + ("aligned_segment1", "aligned_segment2", "expected"), + [ + pytest.param( # type: ignore[misc] + "aligned_segment_28584", + "aligned_segment_17416", + { + "read1": { + "start": 28584, + "end": 28733, + "length": 149, + "status": None, + "transcript": None, + "block_start": (28584, 28704), + "block_end": (28704, 28733), + }, + "read2": { + "start": 17416, + "end": 17805, + "length": 389, + "status": None, + "transcript": None, + "block_start": (17416, 17718), + "block_end": (17479, 17805), + }, + }, + id="28584 and 17416 - Assignment and Transcript are None", + ), + ], +) +def test_extract_features_from_pair( + aligned_segment1: str, + aligned_segment2: str, + expected: dict[str, dict[str, int | None | str | tuple[int, int]]], + request: pytest.FixtureRequest, +) -> None: + """Test extract of features from a list of pairs.""" + read_pair = isoslam.extract_features_from_pair( + [ + request.getfixturevalue(aligned_segment1), + request.getfixturevalue(aligned_segment2), + ] + ) + assert isinstance(read_pair, dict) + assert read_pair == expected +======= +# @pytest.mark.parametrize( +# ("aligned_segment", "start", "end", "length", "status", "transcript", "block_start", "block_end"), +# [ +# pytest.param( # type: ignore[misc] +# "aligned_segment_28584", +# 28584, +# 28733, +# 149, +# None, +# None, +# (28584, 28704), +# (28704, 28733), +# id="28584 - Assignment and Transcript are None", +# ), +# pytest.param( +# "aligned_segment_17416", +# 17416, +# 17805, +# 389, +# "Assigned", +# "Something", +# (17416, 17718), +# (17479, 17805), +# id="17416 - Assignment and Transcript are None", +# marks=pytest.mark.xfail(reasion="Not getting Assigned or Transcript tags for some reason?"), +# ), +# pytest.param( +# "aligned_segment_18029", +# 18029, +# 18385, +# 356, +# "Assigned", +# "something", +# (18029, 18380), +# (18174, 18385), +# id="17416 - Assignment and Transcript are None", +# marks=pytest.mark.xfail(reasion="Not getting Assigned tag for some reason?"), +# ), +# ], +# ) +# def test_extract_features_from_read_param( +# aligned_segment: str, +# start: int, +# end: int, +# length: int, +# status: str, +# transcript: str, +# block_start: tuple[int, int], +# block_end: tuple[int, int], +# request: pytest.FixtureRequest, +# ) -> None: +# """Test extract of features from an aligned segment read.""" +# segment = isoslam.extract_features_from_read(request.getfixturevalue(aligned_segment)) +# assert isinstance(segment, dict) +# assert segment["start"] == start +# assert segment["end"] == end +# assert segment["length"] == length +# assert segment["status"] == status +# assert segment["transcript"] == transcript +# assert segment["block_start"] == block_start +# assert segment["block_end"] == block_end + + +# @pytest.mark.parametrize( +# ("aligned_segment1", "aligned_segment2", "expected"), +# [ +# pytest.param( # type: ignore[misc] +# "aligned_segment_28584", +# "aligned_segment_17416", +# { +# "read1": { +# "start": 28584, +# "end": 28733, +# "length": 149, +# "status": None, +# "transcript": None, +# "block_start": (28584, 28704), +# "block_end": (28704, 28733), +# }, +# "read2": { +# "start": 17416, +# "end": 17805, +# "length": 389, +# "status": None, +# "transcript": None, +# jls_extract_var: (17416, 17718), +# "block_end": (17479, 17805), +# }, +# }, +# id="28584 and 17416 - Assignment and Transcript are None", +# ), +# ], +# ) +# def test_extract_features_from_pair( +# aligned_segment1: str, +# aligned_segment2: str, +# expected: dict[str, dict[str, int | None | str | tuple[int, int]]], +# request: pytest.FixtureRequest, +# ) -> None: +# """Test extract of features from a list of pairs.""" +# read_pair = isoslam.extract_features_from_pair( +# [ +# request.getfixturevalue(aligned_segment1), +# request.getfixturevalue(aligned_segment2), +# ] +# ) +# assert isinstance(read_pair, dict) +# assert read_pair == expected +>>>>>>> 3ee6aa7 (feature(isoslam): Adds extract_segment_pair() function) From a1e6d13b0642c10c603bb0547cc2a78f1069f8fc Mon Sep 17 00:00:00 2001 From: Neil Shephard Date: Tue, 10 Dec 2024 10:04:26 +0000 Subject: [PATCH 4/5] bug(pipeline_slam_3UIs): Restoring needed spaces in shell calls --- isoslam/pipeline_slam_3UIs.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/isoslam/pipeline_slam_3UIs.py b/isoslam/pipeline_slam_3UIs.py index e969087..9355fc8 100644 --- a/isoslam/pipeline_slam_3UIs.py +++ b/isoslam/pipeline_slam_3UIs.py @@ -55,12 +55,12 @@ def feature_count_read_assignments(infile, outfile): outdir = os.path.dirname(outfile) rename_outfile = outfile.replace(".assigned.bam", "") statement = ( - "featureCounts" + "featureCounts " "-p " f"-a {annotation} " f"-o {outdir}/counts.txt " "-T 2 " - "-R BAM" + "-R BAM " f"{infile} &&" "mv %(rename_outfile)s.bam.featureCounts.bam %(outfile)s" ) From 68fdba15331c69e784e9ef1598279772cf692d91 Mon Sep 17 00:00:00 2001 From: Neil Shephard Date: Tue, 10 Dec 2024 10:16:35 +0000 Subject: [PATCH 5/5] chore: Resolving merge conflict --- tests/test_isoslam.py | 314 ------------------------------------------ 1 file changed, 314 deletions(-) diff --git a/tests/test_isoslam.py b/tests/test_isoslam.py index 07ab3b3..a30283a 100644 --- a/tests/test_isoslam.py +++ b/tests/test_isoslam.py @@ -93,163 +93,6 @@ def test_extract_segment_pairs(bam_file: str | Path, expected_length: int) -> No assert len(list(alignment_file)) == expected_length -<<<<<<< HEAD -<<<<<<< HEAD -@pytest.mark.parametrize( - ("aligned_segment1", "aligned_segment2", "expected"), - [ - pytest.param( # type: ignore[misc] - "aligned_segment_28584", - "aligned_segment_17416", - { - "read1": { - "start": 28584, - "end": 28733, - "length": 149, - "status": None, - "transcript": None, - "block_start": (28584, 28704), - "block_end": (28704, 28733), - }, - "read2": { - "start": 17416, - "end": 17805, - "length": 389, - "status": None, - "transcript": None, - "block_start": (17416, 17718), - "block_end": (17479, 17805), - }, - }, - id="28584 and 17416 - Assignment and Transcript are None", - ), - ], -) -def test_extract_features_from_pair( - aligned_segment1: str, - aligned_segment2: str, - expected: dict[str, dict[str, int | None | str | tuple[int, int]]], - request: pytest.FixtureRequest, -) -> None: - """Test extract of features from a list of pairs.""" - read_pair = isoslam.extract_features_from_pair( - [ - request.getfixturevalue(aligned_segment1), - request.getfixturevalue(aligned_segment2), - ] - ) - assert isinstance(read_pair, dict) - assert read_pair == expected -||||||| parent of 3878e7a (fixup! feature(isoslam): Adds functions to extract features from reads) -# @pytest.mark.parametrize( -# ("aligned_segment", "start", "end", "length", "status", "transcript", "block_start", "block_end"), -# [ -# pytest.param( # type: ignore[misc] -# "aligned_segment_28584", -# 28584, -# 28733, -# 149, -# None, -# None, -# (28584, 28704), -# (28704, 28733), -# id="28584 - Assignment and Transcript are None", -# ), -# pytest.param( -# "aligned_segment_17416", -# 17416, -# 17805, -# 389, -# "Assigned", -# "Something", -# (17416, 17718), -# (17479, 17805), -# id="17416 - Assignment and Transcript are None", -# marks=pytest.mark.xfail(reasion="Not getting Assigned or Transcript tags for some reason?"), -# ), -# pytest.param( -# "aligned_segment_18029", -# 18029, -# 18385, -# 356, -# "Assigned", -# "something", -# (18029, 18380), -# (18174, 18385), -# id="17416 - Assignment and Transcript are None", -# marks=pytest.mark.xfail(reasion="Not getting Assigned tag for some reason?"), -# ), -# ], -# ) -# def test_extract_features_from_read_param( -# aligned_segment: str, -# start: int, -# end: int, -# length: int, -# status: str, -# transcript: str, -# block_start: tuple[int, int], -# block_end: tuple[int, int], -# request: pytest.FixtureRequest, -# ) -> None: -# """Test extract of features from an aligned segment read.""" -# segment = isoslam.extract_features_from_read(request.getfixturevalue(aligned_segment)) -# assert isinstance(segment, dict) -# assert segment["start"] == start -# assert segment["end"] == end -# assert segment["length"] == length -# assert segment["status"] == status -# assert segment["transcript"] == transcript -# assert segment["block_start"] == block_start -# assert segment["block_end"] == block_end - - -# @pytest.mark.parametrize( -# ("aligned_segment1", "aligned_segment2", "expected"), -# [ -# pytest.param( # type: ignore[misc] -# "aligned_segment_28584", -# "aligned_segment_17416", -# { -# "read1": { -# "start": 28584, -# "end": 28733, -# "length": 149, -# "status": None, -# "transcript": None, -# "block_start": (28584, 28704), -# "block_end": (28704, 28733), -# }, -# "read2": { -# "start": 17416, -# "end": 17805, -# "length": 389, -# "status": None, -# "transcript": None, -# jls_extract_var: (17416, 17718), -# "block_end": (17479, 17805), -# }, -# }, -# id="28584 and 17416 - Assignment and Transcript are None", -# ), -# ], -# ) -# def test_extract_features_from_pair( -# aligned_segment1: str, -# aligned_segment2: str, -# expected: dict[str, dict[str, int | None | str | tuple[int, int]]], -# request: pytest.FixtureRequest, -# ) -> None: -# """Test extract of features from a list of pairs.""" -# read_pair = isoslam.extract_features_from_pair( -# [ -# request.getfixturevalue(aligned_segment1), -# request.getfixturevalue(aligned_segment2), -# ] -# ) -# assert isinstance(read_pair, dict) -# assert read_pair == expected -======= @pytest.mark.parametrize( ("aligned_segment", "start", "end", "length", "status", "transcript", "block_start", "block_end"), [ @@ -389,160 +232,3 @@ def test_extract_features_from_pair( ) assert isinstance(read_pair, dict) assert read_pair == expected ->>>>>>> 3878e7a (fixup! feature(isoslam): Adds functions to extract features from reads) -||||||| parent of 3ee6aa7 (feature(isoslam): Adds extract_segment_pair() function) -@pytest.mark.parametrize( - ("aligned_segment1", "aligned_segment2", "expected"), - [ - pytest.param( # type: ignore[misc] - "aligned_segment_28584", - "aligned_segment_17416", - { - "read1": { - "start": 28584, - "end": 28733, - "length": 149, - "status": None, - "transcript": None, - "block_start": (28584, 28704), - "block_end": (28704, 28733), - }, - "read2": { - "start": 17416, - "end": 17805, - "length": 389, - "status": None, - "transcript": None, - "block_start": (17416, 17718), - "block_end": (17479, 17805), - }, - }, - id="28584 and 17416 - Assignment and Transcript are None", - ), - ], -) -def test_extract_features_from_pair( - aligned_segment1: str, - aligned_segment2: str, - expected: dict[str, dict[str, int | None | str | tuple[int, int]]], - request: pytest.FixtureRequest, -) -> None: - """Test extract of features from a list of pairs.""" - read_pair = isoslam.extract_features_from_pair( - [ - request.getfixturevalue(aligned_segment1), - request.getfixturevalue(aligned_segment2), - ] - ) - assert isinstance(read_pair, dict) - assert read_pair == expected -======= -# @pytest.mark.parametrize( -# ("aligned_segment", "start", "end", "length", "status", "transcript", "block_start", "block_end"), -# [ -# pytest.param( # type: ignore[misc] -# "aligned_segment_28584", -# 28584, -# 28733, -# 149, -# None, -# None, -# (28584, 28704), -# (28704, 28733), -# id="28584 - Assignment and Transcript are None", -# ), -# pytest.param( -# "aligned_segment_17416", -# 17416, -# 17805, -# 389, -# "Assigned", -# "Something", -# (17416, 17718), -# (17479, 17805), -# id="17416 - Assignment and Transcript are None", -# marks=pytest.mark.xfail(reasion="Not getting Assigned or Transcript tags for some reason?"), -# ), -# pytest.param( -# "aligned_segment_18029", -# 18029, -# 18385, -# 356, -# "Assigned", -# "something", -# (18029, 18380), -# (18174, 18385), -# id="17416 - Assignment and Transcript are None", -# marks=pytest.mark.xfail(reasion="Not getting Assigned tag for some reason?"), -# ), -# ], -# ) -# def test_extract_features_from_read_param( -# aligned_segment: str, -# start: int, -# end: int, -# length: int, -# status: str, -# transcript: str, -# block_start: tuple[int, int], -# block_end: tuple[int, int], -# request: pytest.FixtureRequest, -# ) -> None: -# """Test extract of features from an aligned segment read.""" -# segment = isoslam.extract_features_from_read(request.getfixturevalue(aligned_segment)) -# assert isinstance(segment, dict) -# assert segment["start"] == start -# assert segment["end"] == end -# assert segment["length"] == length -# assert segment["status"] == status -# assert segment["transcript"] == transcript -# assert segment["block_start"] == block_start -# assert segment["block_end"] == block_end - - -# @pytest.mark.parametrize( -# ("aligned_segment1", "aligned_segment2", "expected"), -# [ -# pytest.param( # type: ignore[misc] -# "aligned_segment_28584", -# "aligned_segment_17416", -# { -# "read1": { -# "start": 28584, -# "end": 28733, -# "length": 149, -# "status": None, -# "transcript": None, -# "block_start": (28584, 28704), -# "block_end": (28704, 28733), -# }, -# "read2": { -# "start": 17416, -# "end": 17805, -# "length": 389, -# "status": None, -# "transcript": None, -# jls_extract_var: (17416, 17718), -# "block_end": (17479, 17805), -# }, -# }, -# id="28584 and 17416 - Assignment and Transcript are None", -# ), -# ], -# ) -# def test_extract_features_from_pair( -# aligned_segment1: str, -# aligned_segment2: str, -# expected: dict[str, dict[str, int | None | str | tuple[int, int]]], -# request: pytest.FixtureRequest, -# ) -> None: -# """Test extract of features from a list of pairs.""" -# read_pair = isoslam.extract_features_from_pair( -# [ -# request.getfixturevalue(aligned_segment1), -# request.getfixturevalue(aligned_segment2), -# ] -# ) -# assert isinstance(read_pair, dict) -# assert read_pair == expected ->>>>>>> 3ee6aa7 (feature(isoslam): Adds extract_segment_pair() function)