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Error in normalize.quantiles(dataset0) :ERROR; return code from pthread_create() is 22 #7

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skyfall-lyc opened this issue Nov 18, 2021 · 4 comments

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@skyfall-lyc
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Hi,
Thank you so much for developing Scissor!
I prepaer to explore the Scissor when I read your paper.
I encounted an error in this step:
infos1 <- Scissor(bulk_dataset, sc_dataset, phenotype, alpha = 0.05, family = "cox", Save_file = 'Scissor_LUAD_survival.RData')
Error in normalize.quantiles(dataset0) : ERROR; return code from pthread_create() is 22

Any suggestions would be greatly appreciated! Thank you for your time!
Best regards,
skyfall !

@skyfall-lyc
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Hi, Thank you so much for developing Scissor! I prepaer to explore the Scissor when I read your paper. I encounted an error in this step: infos1 <- Scissor(bulk_dataset, sc_dataset, phenotype, alpha = 0.05, family = "cox", Save_file = 'Scissor_LUAD_survival.RData') Error in normalize.quantiles(dataset0) : ERROR; return code from pthread_create() is 22 Any suggestions would be greatly appreciated! Thank you for your time! Best regards, skyfall !

I found the solution in Bioconductor/bioconductor_docker#22

@Sudolin
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Sudolin commented Nov 24, 2021

Hi, the solution you provived here could not fix the problem in my case. Is there other ways to fix this error? Thanks in advance.

Best,
Leo Lam

@qi-shen
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qi-shen commented Mar 21, 2022

I have the same error

@kefu007
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kefu007 commented Apr 22, 2022

I also have the same question

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4 participants