From 368c07e53b7dd8adbff331a897a05a0aeffbbd14 Mon Sep 17 00:00:00 2001
From: susansjy22 <138763933+susansjy22@users.noreply.github.com>
Date: Fri, 1 Mar 2024 16:52:44 +1100
Subject: [PATCH] Seurat::as.seurat

---
 NAMESPACE  | 1 +
 README.rmd | 2 +-
 2 files changed, 2 insertions(+), 1 deletion(-)

diff --git a/NAMESPACE b/NAMESPACE
index da91a26..783a555 100644
--- a/NAMESPACE
+++ b/NAMESPACE
@@ -60,6 +60,7 @@ importFrom(Seurat,RunPCA)
 importFrom(Seurat,ScaleData)
 importFrom(Seurat,VariableFeatures)
 importFrom(Seurat,as.SingleCellExperiment)
+importFrom(Seurat,as.Seurat)
 importFrom(SingleR,SingleR)
 importFrom(SummarizedExperiment,`rowData<-`)
 importFrom(SummarizedExperiment,assays)
diff --git a/README.rmd b/README.rmd
index 33de35c..b50777e 100644
--- a/README.rmd
+++ b/README.rmd
@@ -132,7 +132,7 @@ library(Seurat)
 library(scRNAseq)
 input_data_path =  tempfile(tmpdir = ".") |> paste0(".rds")
 HeOrganAtlasData(ensembl=FALSE,location=FALSE)|>
-  as.Seurat(data = NULL) |>
+  Seurat::as.Seurat(data = NULL) |>
   saveRDS(input_data_path)
 ```