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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(GLMplot)
export(MAplot)
export(MDSplot)
export(PCAplot)
export(exploreDDS)
export(exploreDDSplot)
export(hclustplot)
export(heatMaplot)
export(showDT)
export(tSNEplot)
export(volcanoplot)
importFrom(DESeq2,DESeq)
importFrom(DESeq2,DESeqDataSetFromMatrix)
importFrom(DESeq2,DESeqTransform)
importFrom(DESeq2,counts)
importFrom(DESeq2,estimateSizeFactors)
importFrom(DESeq2,lfcShrink)
importFrom(DESeq2,plotPCA)
importFrom(DESeq2,results)
importFrom(DESeq2,rlog)
importFrom(DESeq2,varianceStabilizingTransformation)
importFrom(DT,datatable)
importFrom(GGally,ggpairs)
importFrom(Rtsne,Rtsne)
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,colData)
importFrom(ape,as.phylo)
importFrom(dplyr,as_tibble)
importFrom(dplyr,bind_rows)
importFrom(dplyr,do)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,mutate)
importFrom(dplyr,select)
importFrom(ggplot2,.data)
importFrom(ggplot2,aes)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,coord_cartesian)
importFrom(ggplot2,coord_fixed)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_grid)
importFrom(ggplot2,geom_hex)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_smooth)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggsave)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,margin)
importFrom(ggplot2,rel)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_colour_manual)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_y_reverse)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(ggrepel,geom_text_repel)
importFrom(ggtree,geom_tiplab)
importFrom(ggtree,ggtree)
importFrom(ggtree,theme_tree)
importFrom(glmpca,glmpca)
importFrom(magrittr,"%>%")
importFrom(pheatmap,pheatmap)
importFrom(plotly,ggplotly)
importFrom(plotly,plot_ly)
importFrom(plotly,subplot)
importFrom(stats,cmdscale)
importFrom(stats,cor)
importFrom(stats,dist)
importFrom(stats,hclust)
importFrom(stats,setNames)
importFrom(tibble,rownames_to_column)