From a05c2ffc3c30e8a10d9e609451dbb5e91aa04e4a Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Tom=20David=20M=C3=BCller?= Date: Wed, 29 May 2024 00:22:20 +0200 Subject: [PATCH] rename output files --- src/Workflow.py | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/src/Workflow.py b/src/Workflow.py index 8f8da0b5..fa89d7cb 100644 --- a/src/Workflow.py +++ b/src/Workflow.py @@ -442,15 +442,15 @@ def execution(self) -> None: out_spec2 = join(folder_path, f'spec2.tsv') out_spec3 = join(folder_path, f'spec3.tsv') out_spec4 = join(folder_path, f'spec4.tsv') - out_mzml = join(folder_path, f'out.mzML') + out_mzml = join(folder_path, f'out_deconv.mzML') out_deconv_mzml_viewer = join(folder_path_deconv, f'{file_name}_{current_time}_deconv.mzML') out_quant = join(folder_path, f'quant.tsv') - out_annotated_mzml = join(folder_path, f'annotated.mzML') + out_annotated_mzml = join(folder_path, f'anno_annotated.mzML') out_annotated_mzml_viewer = join(folder_path_anno, f'{file_name}_{current_time}_annotated.mzML') - out_msalign1 = join(folder_path, f'msalign1.msalign') - out_msalign2 = join(folder_path, f'msalign2.msalign') - out_feature1 = join(folder_path, f'feature1.feature') - out_feature2 = join(folder_path, f'feature2.feature') + out_msalign1 = join(folder_path, f'msalign1_ms1.msalign') + out_msalign2 = join(folder_path, f'msalign2_ms2.msalign') + out_feature1 = join(folder_path, f'feature1_ms1.feature') + out_feature2 = join(folder_path, f'feature2_ms2.feature') all_outputs = [ out_tsv, out_spec1, out_spec2, out_spec3, out_spec4, out_mzml, out_quant, out_annotated_mzml, out_msalign1,