diff --git a/.changes/fix-nsis-uninstall-delete-app-data.md b/.changes/fix-nsis-uninstall-delete-app-data.md
new file mode 100644
index 000000000000..4bc116c25a42
--- /dev/null
+++ b/.changes/fix-nsis-uninstall-delete-app-data.md
@@ -0,0 +1,5 @@
+---
+'tauri-bundler': 'patch:bug'
+---
+
+On Windows, Fix NSIS uninstaller deleting the wrong application data if the delete the application data checkbox is checked.
diff --git a/tooling/bundler/src/bundle/windows/templates/installer.nsi b/tooling/bundler/src/bundle/windows/templates/installer.nsi
index 83f6ce504e07..356fdcde1d7a 100644
--- a/tooling/bundler/src/bundle/windows/templates/installer.nsi
+++ b/tooling/bundler/src/bundle/windows/templates/installer.nsi
@@ -645,12 +645,6 @@ Section Uninstall
   ; Remove desktop shortcuts
   Delete "$DESKTOP\${MAINBINARYNAME}.lnk"
 
-  ; Delete app data
-  ${If} $DeleteAppDataCheckboxState == 1
-    RmDir /r "$APPDATA\${BUNDLEID}"
-    RmDir /r "$LOCALAPPDATA\${BUNDLEID}"
-  ${EndIf}
-
   ; Remove registry information for add/remove programs
   !if "${INSTALLMODE}" == "both"
     DeleteRegKey SHCTX "${UNINSTKEY}"
@@ -662,6 +656,13 @@ Section Uninstall
 
   DeleteRegValue HKCU "${MANUPRODUCTKEY}" "Installer Language"
 
+  ; Delete app data
+  ${If} $DeleteAppDataCheckboxState == 1
+    SetShellVarContext current
+    RmDir /r "$APPDATA\${BUNDLEID}"
+    RmDir /r "$LOCALAPPDATA\${BUNDLEID}"
+  ${EndIf}
+
   ${GetOptions} $CMDLINE "/P" $R0
   IfErrors +2 0
     SetAutoClose true