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The behavior, when the number of rounds was only one, was some weights becoming NaNs during training, for log_etas weights, particularly due to this step in the code.
It was something associated with any of these lines. I think it was the normalization being always one.
The behavior, when the number of rounds was only one, was some weights becoming NaNs during training, for log_etas weights, particularly due to this step in the code.
It was something associated with any of these lines. I think it was the normalization being always one.
mubind/mubind/models/models.py
Lines 1635 to 1649 in 270dc2a
If prevented for the CTCF and discarding the column [1], one could then load multiple samples with non-similar k-mers, and only one round.
https://github.com/theislab/mubind/blob/fix-scatac/notebooks/batch/01_CTCF_two_batches.ipynb
@johschnee do you remember/can you point out, in case you remember what the crucial step was, and if a likely fix is possible? Thank you.
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