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Overview

Pylomap is a program which creates data visualisations for QIIME2 BIOM microorganism data. It allows you to :

  • Produce a heat map to show and compare the relative abundance of microbes in your samples.
  • Generate a dendrogram showing the Aitchison similarity of your samples, clustered using a complete algorithm.
  • Show which pathways are associated with the microbes present in your samples.
  • Create LaTex tables showing the names and descriptions of your chosen pathways.
  • Group microbes by taxon, such as phylum or classification, to give a broader overview of the data.

Output heat map:

Grouping by phylum:

LaTex table: