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I tried installing table2asn and then putting a symlink to tbl2asn in the prokka binaries folder, but prokka did not like this as it couldn't determine the version number of tbl2asn as being>24.3 or higher.
The text was updated successfully, but these errors were encountered:
I am having the same issue and got the following error:
Error: Too many positional arguments (1), the offending value: -
Error: (CArgException::eSynopsis) Too many positional arguments (1), the offending value: -
[16:48:11] Could not determine version of tbl2asn - please install version 24.3 or higher
Hello! I am facing exactly the same issue as @dannagifford but still cannot make it work... I get the following:
Error: Too many positional arguments (1), the offending value: -
Error: (CArgException::eSynopsis) Too many positional arguments (1), the offending value: -
[13:41:10] Could not determine version of tbl2asn - please install version 24.3 or higher
Even if I tried with tbl2asn-forever, did not work...
I have already installed the updated table2asn as standalone but still cannot get it work...
Any input would be much appreciated ... thnx
FYI
which tbl2asn gives this:
/usr/local/bin/tbl2asn
which prokka gives this:
/opt/homebrew/bin/prokka
tbl2asn has been replaced with table2asn. tbl2asn is no longer available for download as of 18 June 2024.
https://ftp.ncbi.nih.gov/toolbox/ncbi_tools/converters/by_program/tbl2asn/README
The new replacement table2asn is here:
https://www.ncbi.nlm.nih.gov/genbank/table2asn/
I tried installing table2asn and then putting a symlink to tbl2asn in the prokka binaries folder, but prokka did not like this as it couldn't determine the version number of tbl2asn as being>24.3 or higher.
The text was updated successfully, but these errors were encountered: