From 6626035f41305e107ac89da7b7ffd018cea0222a Mon Sep 17 00:00:00 2001 From: Torsten Seemann Date: Fri, 13 Mar 2020 15:49:43 +1100 Subject: [PATCH] travis: simplify samtools build --- .travis/install_deps.sh | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/.travis/install_deps.sh b/.travis/install_deps.sh index f2022a9..9e75d13 100755 --- a/.travis/install_deps.sh +++ b/.travis/install_deps.sh @@ -3,7 +3,8 @@ set -e HERE="$PWD" -WGET="wget --quiet" +#WGET="wget --quiet" +WGET="wget --progress=dot:mega" MAKE="make --silent -j" UNTAR="tar xf" @@ -12,7 +13,7 @@ SAMTOOLS=samtools-$SAMTOOLSVER echo "* $SAMTOOLS" $WGET https://github.com/samtools/samtools/releases/download/$SAMTOOLSVER/$SAMTOOLS.tar.bz2 $UNTAR $SAMTOOLS.tar.bz2 -(cd $SAMTOOLS && ./configure --prefix=$HERE/$SAMTOOLS && $MAKE install) +(cd $SAMTOOLS && ./configure --prefix=$HERE/$SAMTOOLS --disable-s3 --disable-gcs --disable-libcurl --disable-plugins && $MAKE install) PATH=$HERE/$SAMTOOLS/bin:$PATH SAMCLIP=samclip