Apply automatic documentation changes

Author: frickjack

docs/_build/doctrees/environment.pickle

@@ -74,7 +74,7 @@ <h1>Source code for gen3.auth</h1><div class="highlight"><pre>
     <span class="n">urlparts</span> <span class="o">=</span> <span class="n">urlparse</span><span class="p">(</span><span class="n">info</span><span class="p">[</span><span class="s2">&quot;iss&quot;</span><span class="p">])</span>
     <span class="n">endpoint</span> <span class="o">=</span> <span class="n">urlparts</span><span class="o">.</span><span class="n">scheme</span> <span class="o">+</span> <span class="s2">&quot;://&quot;</span> <span class="o">+</span> <span class="n">urlparts</span><span class="o">.</span><span class="n">hostname</span>
     <span class="k">if</span> <span class="n">urlparts</span><span class="o">.</span><span class="n">port</span><span class="p">:</span>
-        <span class="n">endpoint</span> <span class="o">+=</span> <span class="nb">str</span><span class="p">(</span><span class="n">urlparts</span><span class="o">.</span><span class="n">port</span><span class="p">)</span>
+        <span class="n">endpoint</span> <span class="o">+=</span> <span class="s2">&quot;:&quot;</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">urlparts</span><span class="o">.</span><span class="n">port</span><span class="p">)</span>
     <span class="k">return</span> <span class="n">endpoint</span>
 
 <span class="k">def</span> <span class="nf">_handle_access_token_response</span><span class="p">(</span><span class="n">resp</span><span class="p">,</span> <span class="n">token_key</span><span class="p">):</span>

docs/_build/doctrees/tools/indexing.doctree

@@ -308,7 +308,7 @@ <h1>Indexing Tools<a class="headerlink" href="#indexing-tools" title="Permalink
 
 <dl class="function">
 <dt id="gen3.tools.indexing.verify_manifest.async_verify_object_manifest">
-<code class="descclassname">gen3.tools.indexing.verify_manifest.</code><code class="descname">async_verify_object_manifest</code><span class="sig-paren">(</span><em>commons_url</em>, <em>manifest_file</em>, <em>max_concurrent_requests=24</em>, <em>manifest_row_parsers={'acl': &lt;function _get_acl_from_row at 0x7f0b0eea6ae8&gt;</em>, <em>'authz': &lt;function _get_authz_from_row at 0x7f0b0eea6b70&gt;</em>, <em>'file_name': &lt;function _get_file_name_from_row at 0x7f0b0eea6c80&gt;</em>, <em>'file_size': &lt;function _get_file_size_from_row at 0x7f0b0eea6950&gt;</em>, <em>'guid': &lt;function _get_guid_from_row at 0x7f0b0eea6a60&gt;</em>, <em>'md5': &lt;function _get_md5_from_row at 0x7f0b0eea69d8&gt;</em>, <em>'urls': &lt;function _get_urls_from_row at 0x7f0b0eea6bf8&gt;}</em>, <em>manifest_file_delimiter=None</em>, <em>output_filename='verify-manifest-errors-1610403667.7195635.log'</em><span class="sig-paren">)</span><a class="reference internal" href="../_modules/gen3/tools/indexing/verify_manifest.html#async_verify_object_manifest"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#gen3.tools.indexing.verify_manifest.async_verify_object_manifest" title="Permalink to this definition">¶</a></dt>
+<code class="descclassname">gen3.tools.indexing.verify_manifest.</code><code class="descname">async_verify_object_manifest</code><span class="sig-paren">(</span><em>commons_url</em>, <em>manifest_file</em>, <em>max_concurrent_requests=24</em>, <em>manifest_row_parsers={'acl': &lt;function _get_acl_from_row at 0x7fd3204e0950&gt;</em>, <em>'authz': &lt;function _get_authz_from_row at 0x7fd3204e09d8&gt;</em>, <em>'file_name': &lt;function _get_file_name_from_row at 0x7fd3204e0ae8&gt;</em>, <em>'file_size': &lt;function _get_file_size_from_row at 0x7fd3204e07b8&gt;</em>, <em>'guid': &lt;function _get_guid_from_row at 0x7fd3204e08c8&gt;</em>, <em>'md5': &lt;function _get_md5_from_row at 0x7fd3204e0840&gt;</em>, <em>'urls': &lt;function _get_urls_from_row at 0x7fd3204e0a60&gt;}</em>, <em>manifest_file_delimiter=None</em>, <em>output_filename='verify-manifest-errors-1610475868.0435164.log'</em><span class="sig-paren">)</span><a class="reference internal" href="../_modules/gen3/tools/indexing/verify_manifest.html#async_verify_object_manifest"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#gen3.tools.indexing.verify_manifest.async_verify_object_manifest" title="Permalink to this definition">¶</a></dt>
 <dd><p>Verify all file object records into a manifest csv</p>
 <table class="docutils field-list" frame="void" rules="none">
 <col class="field-name" />

docs/_build/doctrees/tools/metadata.doctree

@@ -87,7 +87,7 @@ <h1>Metadata Tools<a class="headerlink" href="#metadata-tools" title="Permalink
 
 <dl class="function">
 <dt id="gen3.tools.metadata.ingest_manifest.async_ingest_metadata_manifest">
-<code class="descclassname">gen3.tools.metadata.ingest_manifest.</code><code class="descname">async_ingest_metadata_manifest</code><span class="sig-paren">(</span><em>commons_url</em>, <em>manifest_file</em>, <em>metadata_source</em>, <em>auth=None</em>, <em>max_concurrent_requests=24</em>, <em>manifest_row_parsers={'guid_for_row': &lt;function _get_guid_for_row at 0x7f0b0ec44b70&gt;</em>, <em>'indexed_file_object_guid': &lt;function _query_for_associated_indexd_record_guid at 0x7f0b0ec442f0&gt;}</em>, <em>manifest_file_delimiter=None</em>, <em>output_filename='ingest-metadata-manifest-errors-1610403667.9643931.log'</em>, <em>get_guid_from_file=True</em><span class="sig-paren">)</span><a class="reference internal" href="../_modules/gen3/tools/metadata/ingest_manifest.html#async_ingest_metadata_manifest"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#gen3.tools.metadata.ingest_manifest.async_ingest_metadata_manifest" title="Permalink to this definition">¶</a></dt>
+<code class="descclassname">gen3.tools.metadata.ingest_manifest.</code><code class="descname">async_ingest_metadata_manifest</code><span class="sig-paren">(</span><em>commons_url</em>, <em>manifest_file</em>, <em>metadata_source</em>, <em>auth=None</em>, <em>max_concurrent_requests=24</em>, <em>manifest_row_parsers={'guid_for_row': &lt;function _get_guid_for_row at 0x7fd320257b70&gt;</em>, <em>'indexed_file_object_guid': &lt;function _query_for_associated_indexd_record_guid at 0x7fd3202579d8&gt;}</em>, <em>manifest_file_delimiter=None</em>, <em>output_filename='ingest-metadata-manifest-errors-1610475868.2831695.log'</em>, <em>get_guid_from_file=True</em><span class="sig-paren">)</span><a class="reference internal" href="../_modules/gen3/tools/metadata/ingest_manifest.html#async_ingest_metadata_manifest"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#gen3.tools.metadata.ingest_manifest.async_ingest_metadata_manifest" title="Permalink to this definition">¶</a></dt>
 <dd><p>Ingest all metadata records into a manifest csv</p>
 <table class="docutils field-list" frame="void" rules="none">
 <col class="field-name" />