added a module build_linux_gnu, updated build_macos_gnu (#313)

* added a module build_linux_gnu, updated build_macos_gnu

* updated modulefiles for linux and macos

* added rocoto module loading template to linux and macos wflow_x modules

* updated wflow_linux and wflow_macos

Use env. variable $HOME to correspond the way the virtual environment was set during the build stage

modulefiles/build_linux_compiler

@@ -0,0 +1,91 @@
+#%Module
+
+proc ModulesHelp { } {
+   puts stderr "This module needs to be customized for the user's Linux environment:"
+   puts stderr "specify compilers, path for HPC-stack, load the modules, set compiler and linker flags"
+}
+
+module-whatis "Loads libraries needed for building SRW on Linux"
+
+# This path should point to your HPCstack installation directory
+setenv HPCstack "/home/username/hpc-stack/install"
+
+# Load HPC stack 
+module use $env(HPCstack)/modulefiles/stack
+module load hpc
+module load hpc-python
+#
+module load hpc-gnu
+module load openmpi
+module load hpc-openmpi
+
+module load jasper/2.0.25
+module load zlib/1.2.11
+
+module load hdf5/1.10.6
+module load netcdf/4.7.4
+module load pio/2.5.3
+module load esmf/8.3.0b09
+module load fms/2022.01
+
+module load bacio/2.4.1
+module load crtm/2.3.0
+module load g2/3.4.3
+module load g2tmpl/1.10.0
+module load ip/3.3.3
+module load sp/2.3.3
+module load w3nco/2.4.1
+module load upp/10.0.10
+
+module load gftl-shared/1.3.3
+module load yafyaml/0.5.1
+module load mapl/2.11.0-esmf-8.3.0b09
+module load gfsio/1.4.1
+module load landsfcutil/2.4.1
+module load nemsio/2.5.2
+module load nemsiogfs/2.5.3
+module load sfcio/1.4.1
+module load sigio/2.3.2
+module load w3emc/2.7.3
+module load wgrib2/2.0.8
+
+# Set the env. variables for the serial compilers (CC, FC, CXX), if not present
+setenv CC "/usr/local/bin/gcc"
+setenv FC "/usr/local/bin/gfortran"
+setenv CXX "/usr/local/bin/g++"
+
+# Set MPI compilers depending on the MPI libraries built:
+setenv MPI_CC mpicc
+setenv MPI_CXX mpicxx
+setenv MPI_FC mpif90
+
+# Set compilers and platform names for CMake:
+setenv CMAKE_C_COMPILER $env(MPI_CC)
+setenv CMAKE_CXX_COMPILER $env(MPI_CXX)
+setenv CMAKE_Fortran_COMPILER $env(MPI_FC)
+
+setenv CMAKE_Platform linux.gnu
+#setenv CMAKE_Platform linux.intel
+
+setenv CMAKE_Fortran_COMPILER_ID "GNU"
+#setenv CMAKE_Fortran_COMPILER_ID "Intel"
+
+# Set compiler and linker flags if needed: 
+setenv FFLAGS " -fallow-argument-mismatch"
+
+if { [module-info mode load] } {
+   puts stderr "This module needs to be customized for the user's Linux environment:"
+   puts stderr "load the environment modules if present, hpc-stack modules,"
+   puts stderr "specify compilers, path for HPC-stack and SRW directory on Linux systems"
+   puts stderr "1) env. variable HPCstack is the hpc-stack installation directory"
+   puts stderr "2) Load the modules build with the hpc-stack on your system"
+   puts stderr "3) Specify compilers, compiler and linker flags, and a platform name"
+   puts stderr "   The example below is for the GNU compilers built with OpenMPI libraries"
+   puts stderr "    "
+   puts stderr "NB: After the module is customized, comment out the this line and the `puts stderr` lines above"
+   puts stderr " "
+   puts stderr "Please export env. variable LDFLAGS after the module is successfully loaded:
+       > export LDFLAGS=\"-L\$MPI_ROOT/lib \" "
+}
+
+

modulefiles/build_macos_gnu

@@ -1,9 +1,11 @@
 #%Module
 
 proc ModulesHelp { } {
-   puts stderr "Option 1: M1/arm64 platform, OS BigSur,Monterey (Darwin 20,21) "
-   puts stderr "Option 2: Intel/x86_64 platform, OS BigSur (Darwin 19) "
-   puts stderr "
+   puts stderr "This module needs to be customized for the user's MacOS environment:" 
+   puts stderr "specify compilers, path for HPC-stack, load the modules, set compiler and linker flags"
+   puts stderr "Option 1: M1/arm64 platform, OS BigSur, Monterey (Darwin 20,21) "
+   puts stderr "Option 2: Intel/x86_64 platform, OS Catalina (Darwin 19) "
+   puts stderr " "
 }
 
 module-whatis "Loads libraries needed for building SRW on MacOS"
@@ -15,9 +17,6 @@ if { [module-info mode load] } {
 # This path should point to your HPCstack installation directory
 setenv HPCstack "/Users/username/hpc-stack/install"
 
-# This path should point to your SRW Application directory
-setenv SRW "/Users/username/ufs-srweather-app"
-
 # Load HPC stack 
 module use $env(HPCstack)/modulefiles/stack
 module load hpc
@@ -27,29 +26,27 @@ module load hpc-gnu
 module load openmpi
 module load hpc-openmpi
 
-module use $env(SRW)/modulefiles
-#module load srw_common
 module load jasper/2.0.25
 module load zlib/1.2.11
 
 module load hdf5/1.10.6
 module load netcdf/4.7.4
 module load pio/2.5.3
-module load esmf/8_2_0
-module load fms/2021.04
+module load esmf/8.3.0b09
+module load fms/2022.01
 
 module load bacio/2.4.1
 module load crtm/2.3.0
-module load g2/3.4.5
+module load g2/3.4.3
 module load g2tmpl/1.10.0
 module load ip/3.3.3
 module load sp/2.3.3
 module load w3nco/2.4.1
 module load upp/10.0.10
 
-module load gftl-shared/v1.3.6
-module load yafyaml/v0.5.1
-module load mapl/2.12.2-esmf-8_2_0
+module load gftl-shared/1.3.3
+module load yafyaml/0.5.1
+module load mapl/2.12.2-esmf-8.3.0b09
 module load gfsio/1.4.1
 module load landsfcutil/2.4.1
 module load nemsio/2.5.2
@@ -82,6 +79,12 @@ setenv CMAKE_Platform macos.gnu
 setenv CMAKE_Fortran_COMPILER_ID "GNU"
 setenv FFLAGS "-DNO_QUAD_PRECISION -fallow-argument-mismatch "
 
-# export the environment variable LDFLAGS from the command line
-# after loading the current module:
+# export the env. variable LDFLAGS after loading the current module
 # export LDFLAGS="-L$MPI_ROOT/lib"
+if { [module-info mode load] } {
+   puts stderr " "
+   puts stderr "Please export env. variable LDFLAGS after the module is successfully loaded:
+       > export LDFLAGS=\"-L\$MPI_ROOT/lib \" "
+}
+
+

modulefiles/wflow_linux

@@ -0,0 +1,29 @@
+#%Module
+
+proc ModulesHelp { } {
+   puts stderr "This module activates python environement for running SRW on general Linux"
+}
+
+module-whatis "This module activates python environment for running SRW on general Linux"
+
+setenv CMAKE_Platform linux
+
+# This path should point to your python virtual environment directory,
+# `regional_workflow`, created earlier for 
+# 
+setenv VENV "$env(HOME)/venv/regional_workflow"
+if { [module-info mode load] } {
+   puts stderr "Verify the Python virtual environment path \$VENV shown below is correct, "
+   puts stderr "set to the correct path otherwise: "
+   puts stderr "VENV=$env(VENV) "
+   puts stderr "Please do the following to activate python virtual environment:
+       > source \$VENV/bin/activate "
+}
+
+# Uncomment if Rocoto workflow manager is used
+# This path should point to your Rocoto module location
+# setenv ROCOTOmod "/Users/username/modules"
+# module use $env(ROCOTOmod)
+# module load rocoto
+
+

modulefiles/wflow_macos

@@ -1,8 +1,7 @@
 #%Module
 
 proc ModulesHelp { } {
-   put stderr "This module loads python environement for running SRW on"
-   put stderr "macOS"
+   puts stderr "This module activates python environement for running SRW on macOS"
 }
 
 module-whatis "This module activates python environment for running SRW on macOS"
@@ -12,15 +11,18 @@ setenv CMAKE_Platform macos
 # This path should point to your python virtual environment directory,
 # `regional_workflow`, created earlier for 
 # 
-setenv VENV "/Users/username/venv/regional_workflow"
+setenv VENV "$env(HOME)/venv/regional_workflow"
 if { [module-info mode load] } {
-   puts "source $env(VENV)/bin/activate;"
+   puts stderr "Verify the Python virtual environment path \$VENV shown below is correct, "
+   puts stderr "set to the correct path otherwise: "
+   puts stderr "VENV=$env(VENV) "
+   puts stderr "Please do the following to activate python virtual environment:
+       > source \$VENV/bin/activate "
 }
 
 # Uncomment if Rocoto workflow manager is used
 # This path should point to your Rocoto module location
-# set ROCOTOmod "/Users/username/modules"
-# module use ${ROCOTOmod}
+# setenv ROCOTOmod "/Users/username/modules"
+# module use $env(ROCOTOmod)
 # module load rocoto
-# module list