diff --git a/README.md b/README.md index 95f88ee..2c36eec 100644 --- a/README.md +++ b/README.md @@ -3,11 +3,12 @@ [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/uio-bmi/dagsim/main?labpath=tutorials%2Fhello_world.ipynb) DagSim is a Python-based framework and specification language for simulating data based on a Directed Acyclic Graph ( -DAG) -structure, without any constraints on variable types or functional relations. A succinct YAML format for +DAG) structure, without any constraints on variable types or functional relations. A succinct YAML format for defining the structure of the simulation model promotes transparency, while separate user-provided functions for generating each variable based on its parents ensure the modularization of the simulation code. +Link to the paper: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0284443 + ## Installation DagSim can be easily installed using pip. @@ -117,4 +118,4 @@ dagsim path/to/yaml/file [-v|--verbose] [-d|--draw] [-o output/path|--output_pat ``` For a tutorial on using a YAMl file for simulation, check -this [page](https://uio-bmi.github.io/dagsim/specify_with_code.html#how-to-specify-a-simulation-using-yaml). \ No newline at end of file +this [page](https://uio-bmi.github.io/dagsim/specify_with_code.html#how-to-specify-a-simulation-using-yaml).