diff --git a/justfile b/justfile index d70cb51..eb86e9c 100644 --- a/justfile +++ b/justfile @@ -16,3 +16,7 @@ format: test: docker compose up -d --wait uv run pytest + +# Run development version of API +api: + uv run fastapi dev src/matchbox/server/api.py \ No newline at end of file diff --git a/pyproject.toml b/pyproject.toml index 357e33f..79cd3c7 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -11,6 +11,7 @@ dependencies = [ "click>=8.1.7", "connectorx>=0.3.3", "duckdb>=1.1.1", + "fastapi[standard]>=0.115.0,<0.116.0", "matplotlib>=3.9.2", "pandas>=2.2.3", "pg-bulk-ingest>=0.0.54", diff --git a/src/matchbox/server/__init__.py b/src/matchbox/server/__init__.py index 0881402..81a2af6 100644 --- a/src/matchbox/server/__init__.py +++ b/src/matchbox/server/__init__.py @@ -1,3 +1,4 @@ +from matchbox.server.api import app from matchbox.server.base import ( MatchboxDBAdapter, MatchboxSettings, @@ -5,6 +6,6 @@ inject_backend, ) -__all__ = ["MatchboxDBAdapter", "MatchboxSettings", "inject_backend"] +__all__ = ["app", "MatchboxDBAdapter", "MatchboxSettings", "inject_backend"] initialise_matchbox() diff --git a/src/matchbox/server/api.py b/src/matchbox/server/api.py new file mode 100644 index 0000000..80b84bb --- /dev/null +++ b/src/matchbox/server/api.py @@ -0,0 +1,159 @@ +from enum import StrEnum +from typing import Annotated + +from dotenv import find_dotenv, load_dotenv +from fastapi import Depends, FastAPI, HTTPException +from pydantic import BaseModel + +from matchbox.server.base import BackendManager, MatchboxDBAdapter + +dotenv_path = find_dotenv(usecwd=True) +load_dotenv(dotenv_path) + + +app = FastAPI( + title="matchbox API", + version="0.2.0", +) + + +class BackendEntityType(StrEnum): + DATASETS = "datasets" + MODELS = "models" + DATA = "data" + CLUSTERS = "clusters" + CREATES = "creates" + MERGES = "merges" + PROPOSES = "proposes" + + +class ModelResultsType(StrEnum): + PROBABILITIES = "probabilities" + CLUSTERS = "clusters" + + +class HealthCheck(BaseModel): + """Response model to validate and return when performing a health check.""" + + status: str = "OK" + + +class CountResult(BaseModel): + """Response model for count results""" + + entities: dict[BackendEntityType, int] + + +def get_backend() -> MatchboxDBAdapter: + return BackendManager.get_backend() + + +@app.get("/health") +async def healthcheck() -> HealthCheck: + """ """ + return HealthCheck(status="OK") + + +@app.get("/testing/count") +async def count_backend_items( + backend: Annotated[MatchboxDBAdapter, Depends(get_backend)], + entity: BackendEntityType | None = None, +) -> CountResult: + def get_count(e: BackendEntityType) -> int: + return getattr(backend, str(e)).count() + + if entity is not None: + return CountResult(entities={str(entity): get_count(entity)}) + else: + res = {str(e): get_count(e) for e in BackendEntityType} + return CountResult(entities=res) + + +@app.post("/testing/clear") +async def clear_backend(): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.get("/sources") +async def list_sources(): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.get("/sources/{hash}") +async def get_source(hash: str): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.post("/sources/{hash}") +async def add_source(hash: str): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.get("/models") +async def list_models(): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.get("/models/{name}") +async def get_model(name: str): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.post("/models/{name}") +async def add_model(name: str): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.delete("/models/{name}") +async def delete_model(name: str): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.get("/models/{name}/results") +async def get_results(name: str, result_type: ModelResultsType | None): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.post("/models/{name}/results") +async def set_results(name: str): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.get("/models/{name}/truth") +async def get_truth(name: str): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.post("/models/{name}/truth") +async def set_truth(name: str): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.get("/models/{name}/ancestors") +async def get_ancestors(name: str): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.get("/models/{name}/ancestors_cache") +async def get_ancestors_cache(name: str): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.post("/models/{name}/ancestors_cache") +async def set_ancestors_cache(name: str): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.get("/query") +async def query(): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.get("/validate/hash") +async def validate_hashes(): + raise HTTPException(status_code=501, detail="Not implemented") + + +@app.get("/report/models") +async def get_model_subgraph(): + raise HTTPException(status_code=501, detail="Not implemented") diff --git a/test/server/test_api.py b/test/server/test_api.py new file mode 100644 index 0000000..4c87189 --- /dev/null +++ b/test/server/test_api.py @@ -0,0 +1,117 @@ +from unittest.mock import Mock, patch + +from fastapi.testclient import TestClient +from matchbox.server import app + +client = TestClient(app) + + +class TestMatchboxAPI: + def test_healthcheck(self): + response = client.get("/health") + assert response.status_code == 200 + assert response.json() == {"status": "OK"} + + @patch("matchbox.server.base.BackendManager.get_backend") + def test_count_all_backend_items(self, get_backend): + entity_counts = { + "datasets": 1, + "models": 2, + "data": 3, + "clusters": 4, + "creates": 5, + "merges": 6, + "proposes": 7, + } + mock_backend = Mock() + for e, c in entity_counts.items(): + mock_e = Mock() + mock_e.count = Mock(return_value=c) + setattr(mock_backend, e, mock_e) + get_backend.return_value = mock_backend + + response = client.get("/testing/count") + assert response.status_code == 200 + assert response.json() == {"entities": entity_counts} + + @patch("matchbox.server.base.BackendManager.get_backend") + def test_count_backend_item(self, get_backend): + mock_backend = Mock() + mock_backend.models.count = Mock(return_value=20) + get_backend.return_value = mock_backend + + response = client.get("/testing/count", params={"entity": "models"}) + assert response.status_code == 200 + assert response.json() == {"entities": {"models": 20}} + + # def test_clear_backend(): + # response = client.post("/testing/clear") + # assert response.status_code == 200 + + # def test_list_sources(): + # response = client.get("/sources") + # assert response.status_code == 200 + + # def test_get_source(): + # response = client.get("/sources/test_source") + # assert response.status_code == 200 + + # def test_add_source(): + # response = client.post("/sources") + # assert response.status_code == 200 + + # def test_list_models(): + # response = client.get("/models") + # assert response.status_code == 200 + + # def test_get_model(): + # response = client.get("/models/test_model") + # assert response.status_code == 200 + + # def test_add_model(): + # response = client.post("/models") + # assert response.status_code == 200 + + # def test_delete_model(): + # response = client.delete("/models/test_model") + # assert response.status_code == 200 + + # def test_get_results(): + # response = client.get("/models/test_model/results") + # assert response.status_code == 200 + + # def test_set_results(): + # response = client.post("/models/test_model/results") + # assert response.status_code == 200 + + # def test_get_truth(): + # response = client.get("/models/test_model/truth") + # assert response.status_code == 200 + + # def test_set_truth(): + # response = client.post("/models/test_model/truth") + # assert response.status_code == 200 + + # def test_get_ancestors(): + # response = client.get("/models/test_model/ancestors") + # assert response.status_code == 200 + + # def test_get_ancestors_cache(): + # response = client.get("/models/test_model/ancestors_cache") + # assert response.status_code == 200 + + # def test_set_ancestors_cache(): + # response = client.post("/models/test_model/ancestors_cache") + # assert response.status_code == 200 + + # def test_query(): + # response = client.get("/query") + # assert response.status_code == 200 + + # def test_validate_hashes(): + # response = client.get("/validate/hash") + # assert response.status_code == 200 + + # def test_get_model_subgraph(): + # response = client.get("/report/models") + # assert 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