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open_bucket_hashtable.h
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open_bucket_hashtable.h
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/*
* This file is part of Vlasiator.
* Copyright 2010-2016 Finnish Meteorological Institute
*
* For details of usage, see the COPYING file and read the "Rules of the Road"
* at http://www.physics.helsinki.fi/vlasiator/
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License along
* with this program; if not, write to the Free Software Foundation, Inc.,
* 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
*/
#pragma once
#include <algorithm>
#include <vector>
#include <stdexcept>
#include <cassert>
#include "definitions.h"
// Open bucket power-of-two sized hash table with multiplicative fibonacci hashing
template <typename GID, typename LID, int maxBucketOverflow = 4, GID EMPTYBUCKET = vmesh::INVALID_GLOBALID > class OpenBucketHashtable {
private:
int sizePower; // Logarithm (base two) of the size of the table
size_t fill; // Number of filled buckets
std::vector<std::pair<GID, LID>> buckets;
// Fibonacci hash function for 64bit values
uint32_t fibonacci_hash(GID in) const {
in ^= in >> (32 - sizePower);
uint32_t retval = (uint64_t)(in * 2654435769ul) >> (32 - sizePower);
return retval;
}
//Hash a chunk of memory using fnv_1a
static uint32_t fnv_1a(const void* chunk, size_t bytes) {
assert(chunk);
uint32_t h = 2166136261ul;
const unsigned char* ptr = static_cast<const unsigned char*>(chunk);
while (bytes--){
h = (h ^ *ptr++) * 16777619ul;
}
return h ;
}
// Generic h
uint32_t hash(GID in) const {
static constexpr bool n = (std::is_arithmetic<GID>::value && sizeof(GID) <= sizeof(uint32_t));
if (n) {
return fibonacci_hash(in);
} else {
return fnv_1a(&in, sizeof(GID));
}
}
public:
OpenBucketHashtable() : sizePower(4), fill(0), buckets(1 << sizePower, std::pair<GID, LID>(EMPTYBUCKET, LID())) {};
// Resize the table to fit more things. This is automatically invoked once
// maxBucketOverflow has triggered.
void rehash(int newSizePower) {
if (newSizePower > 31) {
throw std::out_of_range("OpenBucketHashtable ran into rehashing catastrophe and exceeded 32bit buckets.");
}
std::vector<std::pair<GID, LID>> newBuckets(1u << newSizePower, std::pair<GID, LID>(EMPTYBUCKET, LID()));
sizePower = newSizePower;
int bitMask = (1u << sizePower) - 1; // For efficient modulo of the array size
// Iterate through all old elements and rehash them into the new array.
for (auto& e : buckets) {
// Skip empty buckets
if (e.first == EMPTYBUCKET) {
continue;
}
uint32_t newHash = hash(e.first);
bool found = false;
for (int i = 0; i < maxBucketOverflow; i++) {
std::pair<GID, LID>& candidate = newBuckets[(newHash + i) & bitMask];
if (candidate.first == EMPTYBUCKET) {
// Found an empty bucket, assign that one.
candidate = e;
found = true;
break;
}
}
if (!found) {
// Having arrived here means that we unsuccessfully rehashed and
// are *still* overflowing our buckets. So we need to try again with a bigger one.
return rehash(newSizePower + 1);
}
}
// Replace our buckets with the new ones
buckets = newBuckets;
}
// Element access (by reference). Nonexistent elements get created.
LID& at(const GID& key) {
int bitMask = (1 << sizePower) - 1; // For efficient modulo of the array size
uint32_t hashIndex = hash(key);
// Try to find the matching bucket.
for (int i = 0; i < maxBucketOverflow; i++) {
std::pair<GID, LID>& candidate = buckets[(hashIndex + i) & bitMask];
if (candidate.first == key) {
// Found a match, return that
return candidate.second;
}
if (candidate.first == EMPTYBUCKET) {
// Found an empty bucket, assign and return that.
candidate.first = key;
fill++;
return candidate.second;
}
}
// Not found, and we have no free slots to create a new one. So we need to rehash to a larger size.
rehash(sizePower + 1);
return at(key); // Recursive tail call to try again with larger table.
}
const LID& at(const GID& key) const {
int bitMask = (1 << sizePower) - 1; // For efficient modulo of the array size
uint32_t hashIndex = hash(key);
// Try to find the matching bucket.
for (int i = 0; i < maxBucketOverflow; i++) {
const std::pair<GID, LID>& candidate = buckets[(hashIndex + i) & bitMask];
if (candidate.first == key) {
// Found a match, return that
return candidate.second;
}
if (candidate.first == EMPTYBUCKET) {
// Found an empty bucket, so error.
throw std::out_of_range("Element not found in OpenBucketHashtable.at");
}
}
// Not found, so error.
throw std::out_of_range("Element not found in OpenBucketHashtable.at");
}
// Typical array-like access with [] operator
LID& operator[](const GID& key) { return at(key); }
// For STL compatibility: size(), bucket_count(), count(GID), clear()
size_t size() const { return fill; }
size_t bucket_count() const { return buckets.size(); }
size_t count(const GID& key) const {
if (find(key) != end()) {
return 1;
} else {
return 0;
}
}
void clear() {
buckets = std::vector<std::pair<GID, LID>>(1 << sizePower, {EMPTYBUCKET, LID()});
fill = 0;
}
// Iterator type. Iterates through all non-empty buckets.
class iterator {
OpenBucketHashtable<GID, LID>* hashtable;
size_t index;
public:
// Define iterator traits
using iterator_category = std::random_access_iterator_tag;
using value_type = std::pair<GID, LID>;
using difference_type = std::ptrdiff_t;
using pointer = std::pair<GID, LID>*;
using reference = std::pair<GID, LID>&;
iterator(OpenBucketHashtable<GID, LID>* hashtable, size_t index) : hashtable(hashtable), index(index) {}
iterator& operator++() {
index++;
while(index < hashtable->buckets.size()){
if (hashtable->buckets[index].first != EMPTYBUCKET){
break;
}
index++;
}
return *this;
}
iterator operator++(int) { // Postfix version
iterator temp = *this;
++(*this);
return temp;
}
bool operator==(iterator other) const {
// comparison of iterators between two different hashtables undefined
assert(hashtable == other.hashtable);
return index == other.index;
}
bool operator!=(iterator other) const {
return !(*this == other);
}
std::pair<GID, LID>& operator*() const { return hashtable->buckets[index]; }
std::pair<GID, LID>* operator->() const { return &hashtable->buckets[index]; }
size_t getIndex() { return index; }
};
// Const iterator.
class const_iterator {
const OpenBucketHashtable<GID, LID>* hashtable;
size_t index;
public:
// Define iterator traits
using iterator_category = std::random_access_iterator_tag;
using value_type = std::pair<GID, LID>;
using difference_type = std::ptrdiff_t;
using pointer = std::pair<GID, LID>*;
using reference = std::pair<GID, LID>&;
explicit const_iterator(const OpenBucketHashtable<GID, LID>* hashtable, size_t index) : hashtable(hashtable), index(index) {}
const_iterator& operator++() {
index++;
while(index < hashtable->buckets.size()){
if (hashtable->buckets[index].first != EMPTYBUCKET){
break;
}
index++;
}
return *this;
}
const_iterator operator++(int) { // Postfix version
const_iterator temp = *this;
++(*this);
return temp;
}
bool operator==(const_iterator other) const {
// comparison of iterators between two different hashtables undefined
assert(hashtable == other.hashtable);
return index == other.index;
}
bool operator!=(const_iterator other) const {
return !(*this == other);
}
const std::pair<GID, LID>& operator*() const { return hashtable->buckets[index]; }
const std::pair<GID, LID>* operator->() const { return &hashtable->buckets[index]; }
size_t getIndex() { return index; }
};
iterator begin() {
for (size_t i = 0; i < buckets.size(); i++) {
if (buckets[i].first != EMPTYBUCKET) {
return iterator(this, i);
}
}
return end();
}
const_iterator begin() const {
for (size_t i = 0; i < buckets.size(); i++) {
if (buckets[i].first != EMPTYBUCKET) {
return const_iterator(this, i);
}
}
return end();
}
iterator end() { return iterator(this, buckets.size()); }
const_iterator end() const { return const_iterator(this, buckets.size()); }
// Element access by iterator
iterator find(GID key) {
int bitMask = (1 << sizePower) - 1; // For efficient modulo of the array size
uint32_t hashIndex = hash(key);
// Try to find the matching bucket.
for (int i = 0; i < maxBucketOverflow; i++) {
const std::pair<GID, LID>& candidate = buckets[(hashIndex + i) & bitMask];
if (candidate.first == key) {
// Found a match, return that
return iterator(this, (hashIndex + i) & bitMask);
}
if (candidate.first == EMPTYBUCKET) {
// Found an empty bucket. Return empty.
return end();
}
}
// Not found
return end();
}
const const_iterator find(GID key) const {
int bitMask = (1 << sizePower) - 1; // For efficient modulo of the array size
uint32_t hashIndex = hash(key);
// Try to find the matching bucket.
for (int i = 0; i < maxBucketOverflow; i++) {
const std::pair<GID, LID>& candidate = buckets[(hashIndex + i) & bitMask];
if (candidate.first == key) {
// Found a match, return that
return const_iterator(this, (hashIndex + i) & bitMask);
}
if (candidate.first == EMPTYBUCKET) {
// Found an empty bucket. Return empty.
return end();
}
}
// Not found
return end();
}
// More STL compatibility implementations
std::pair<iterator, bool> insert(std::pair<GID, LID> newEntry) {
bool found = find(newEntry.first) != end();
if (!found) {
at(newEntry.first) = newEntry.second;
}
return std::pair<iterator, bool>(find(newEntry.first), !found);
}
// Remove one element from the hash table.
iterator erase(iterator keyPos) {
// Due to overflowing buckets, this might require moving quite a bit of stuff around.
size_t index = keyPos.getIndex();
if (buckets[index].first != EMPTYBUCKET) {
// Decrease fill count
fill--;
// Clear the element itself.
buckets[index].first = EMPTYBUCKET;
int bitMask = (1 << sizePower) - 1; // For efficient modulo of the array size
size_t targetPos = index;
// Search ahead to verify items are in correct places (until empty bucket is found)
for (unsigned int i = 1; i < fill; i++) {
GID nextBucket = buckets[(index + i)&bitMask].first;
if (nextBucket == EMPTYBUCKET) {
// The next bucket is empty, we are done.
break;
}
// Found an entry: is it in the correct bucket?
uint32_t hashIndex = hash(nextBucket);
if ((hashIndex&bitMask) != ((index + i)&bitMask)) {
// This entry has overflown. Now check if it should be moved:
uint32_t distance = ((targetPos - hashIndex + (1<<sizePower) )&bitMask);
if (distance < maxBucketOverflow) {
// Copy this entry to the current newly empty bucket, then continue with deleting
// this overflown entry and continue searching for overflown entries
LID moveValue = buckets[(index+i)&bitMask].second;
buckets[targetPos] = std::pair<GID, LID>(nextBucket,moveValue);
targetPos = ((index+i)&bitMask);
buckets[targetPos].first = EMPTYBUCKET;
}
}
}
}
// return the next valid bucket member
++keyPos;
return keyPos;
}
size_t erase(const GID& key) {
iterator element = find(key);
if(element == end()) {
return 0;
} else {
erase(element);
return 1;
}
}
void swap(OpenBucketHashtable<GID, LID>& other) {
buckets.swap(other.buckets);
int tempSizePower = sizePower;
sizePower = other.sizePower;
other.sizePower = tempSizePower;
size_t tempFill = fill;
fill = other.fill;
other.fill = tempFill;
}
};