Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Tools, tools, tools #23

Open
bgruening opened this issue Aug 6, 2023 · 7 comments
Open

Tools, tools, tools #23

bgruening opened this issue Aug 6, 2023 · 7 comments

Comments

@bgruening
Copy link
Collaborator

We have worked already on a few tools here in Australia and will do so in the next months. However, we do not have a tracking issue ... until now. Here it is.

@bgruening
Copy link
Collaborator Author

QuPath Bioimage Analysis is now available in Galaxy.

grafik

Most of the magic can be found here: https://github.com/bgruening/docker-qupath/

@bgruening
Copy link
Collaborator Author

QGis in Galaxy

grafik

@hechth
Copy link
Collaborator

hechth commented Aug 7, 2023

Dimet xref galaxyproject/tools-iuc#5400

@hechth
Copy link
Collaborator

hechth commented Aug 7, 2023

Tadviewer xref usegalaxy-eu/galaxy#177 --> in progress

@bgruening
Copy link
Collaborator Author

I created some documentation about how to add ITs to EU: https://github.com/usegalaxy-eu/operations/blob/main/interactive_tools.md

@bgruening
Copy link
Collaborator Author

New versoin of RStudio is up for testing on EU: https://humancellatlas.usegalaxy.eu/root?tool_id=interactive_tool_rstudio

@bgruening
Copy link
Collaborator Author

We had two container/tools workshops during our stay. A few tools have been started to integrate and the feedback that we got, went back into the Galaxy Language Server. Which say also a new release https://github.com/galaxyproject/galaxy-language-server

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants