From bf00159abd88d6b48a4b5d3b38e81ccc22ca076d Mon Sep 17 00:00:00 2001
From: Cameron Hyde <chyde@neoformit.com>
Date: Wed, 28 Aug 2024 13:41:34 +1000
Subject: [PATCH 1/3] Lab footers use embedded GMS footer snippet

---
 webapp/home/labs/genome/templates/footer.html | 128 ++----------------
 .../labs/proteomics/templates/footer.html     | 128 ++----------------
 2 files changed, 18 insertions(+), 238 deletions(-)

diff --git a/webapp/home/labs/genome/templates/footer.html b/webapp/home/labs/genome/templates/footer.html
index fa4d580e..271df566 100644
--- a/webapp/home/labs/genome/templates/footer.html
+++ b/webapp/home/labs/genome/templates/footer.html
@@ -1,119 +1,9 @@
-<footer>
-  <div class="container logo">
-    <div class="text-center">
-      <a href="https://www.biocommons.org.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/au-biocommons.png" target="_blank">
-      </a>
-
-      <a href="https://www.qcif.edu.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/qcif.png" target="_blank">
-      </a>
-
-      <a href="https://www.melbournebioinformatics.org.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/unimelb-2.svg" target="_blank">
-      </a>
-
-      <a href="https://www.aarnet.edu.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/aarnet.png" target="_blank">
-      </a>
-    </div>
-
-    <div class="text-center second">
-      <a href="https://www.uq.edu.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/uq-grayscale.png" target="_blank">
-      </a>
-
-      <a href="https://ardc.edu.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/ardc-grayscale.png" target="_blank">
-      </a>
-
-      <a href="https://bioplatforms.com" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/bpa-grayscale.png" target="_blank">
-      </a>
-
-      <a href="https://nci.org.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/nci-grayscale.png" target="_blank">
-      </a>
-
-      <a href="https://pawsey.org.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/pawsey-grayscale.png" target="_blank">
-      </a>
-
-      <a href="https://www.dese.gov.au/ncris" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/ncris-grayscale.png" target="_blank">
-      </a>
-
-      <a href="https://www.qld.gov.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/qld-gov.png" target="_blank">
-      </a>
-    </div>
-  </div>
-
-
-  <div class="container links">
-    <hr>
-    <div class="row" id="footer-links-row">
-      <div class="col" id="footer-galaxy-logo">
-        <a href="/">
-          <img
-          src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/galaxy-black.svg"
-          alt="Galaxy logo black"
-          >
-        </a>
-      </div>
-
-      <div class="col-6">
-        <h6>SITE LINKS</h6>
-        <div class="row" id="footer-site-links">
-          <div class="col-md-6">
-            <small>
-              <a href="/request">Support</a> <br>
-              <a href="/about#acknowledgement-statement">Acknowledging Galaxy Australia</a> <br>
-              <a href="/about#feature-catalogue">Feature catalogue</a> <br>
-              <a href="/about#terms-of-service">Terms and conditions</a>
-            </small>
-          </div>
-
-          <div class="col-md-6">
-            <small>
-              <a href="/about#data-privacy">Privacy and data collection</a> <br>
-              <a href="/about#acceptable-use">Acceptable use</a> <br>
-              <a href="/about#service-levels">Service levels</a>
-            </small>
-          </div>
-        </div>
-      </div>
-
-      <div class="col-6">
-        <div class="row">
-          <div class="col-md-6">
-            <h6>ACKNOWLEDGEMENTS</h6>
-            <p class="tight">
-              <small>
-                We acknowledge and pay respect to the Elders and Traditional Owners
-                of the lands on which our partner organisations stand.
-              </small>
-            </p>
-          </div>
-
-          <div class="col-md-6">
-            <h6>CONNECT</h6>
-            <p>
-              <a href="mailto:help@genome.edu.au">
-                <i class="fas fa-envelope"></i>
-              </a>
-
-              <a href="https://github.com/usegalaxy-au" target="_blank">
-                <i class="fab fa-github"></i>
-              </a>
-
-              <a href="https://twitter.com/galaxyaustralia" target="_blank">
-                <i class="fab fa-twitter"></i>
-              </a>
-            </p>
-          </div>
-        </div>
-      </div>
-    </div>
-  </div>
-</footer>
+<iframe id="footerIframe" style="width: 100%;" src="http://site.usegalaxy.org.au/embed/home/snippets/footer.html"></iframe>
+<script>
+  window.addEventListener("message", function(event) {
+    const iframe = document.getElementById('footerIframe');
+    const height = event.data.height + 'px';
+    console.log('Set footer height:', height);
+    iframe.style.height = height;
+  }, false);
+</script>
diff --git a/webapp/home/labs/proteomics/templates/footer.html b/webapp/home/labs/proteomics/templates/footer.html
index fa4d580e..271df566 100644
--- a/webapp/home/labs/proteomics/templates/footer.html
+++ b/webapp/home/labs/proteomics/templates/footer.html
@@ -1,119 +1,9 @@
-<footer>
-  <div class="container logo">
-    <div class="text-center">
-      <a href="https://www.biocommons.org.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/au-biocommons.png" target="_blank">
-      </a>
-
-      <a href="https://www.qcif.edu.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/qcif.png" target="_blank">
-      </a>
-
-      <a href="https://www.melbournebioinformatics.org.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/unimelb-2.svg" target="_blank">
-      </a>
-
-      <a href="https://www.aarnet.edu.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/aarnet.png" target="_blank">
-      </a>
-    </div>
-
-    <div class="text-center second">
-      <a href="https://www.uq.edu.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/uq-grayscale.png" target="_blank">
-      </a>
-
-      <a href="https://ardc.edu.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/ardc-grayscale.png" target="_blank">
-      </a>
-
-      <a href="https://bioplatforms.com" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/bpa-grayscale.png" target="_blank">
-      </a>
-
-      <a href="https://nci.org.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/nci-grayscale.png" target="_blank">
-      </a>
-
-      <a href="https://pawsey.org.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/pawsey-grayscale.png" target="_blank">
-      </a>
-
-      <a href="https://www.dese.gov.au/ncris" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/ncris-grayscale.png" target="_blank">
-      </a>
-
-      <a href="https://www.qld.gov.au" target="_blank">
-        <img src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/qld-gov.png" target="_blank">
-      </a>
-    </div>
-  </div>
-
-
-  <div class="container links">
-    <hr>
-    <div class="row" id="footer-links-row">
-      <div class="col" id="footer-galaxy-logo">
-        <a href="/">
-          <img
-          src="https://raw.githubusercontent.com/usegalaxy-au/galaxy-media-site/dev/webapp/home/static/logos/footer/galaxy-black.svg"
-          alt="Galaxy logo black"
-          >
-        </a>
-      </div>
-
-      <div class="col-6">
-        <h6>SITE LINKS</h6>
-        <div class="row" id="footer-site-links">
-          <div class="col-md-6">
-            <small>
-              <a href="/request">Support</a> <br>
-              <a href="/about#acknowledgement-statement">Acknowledging Galaxy Australia</a> <br>
-              <a href="/about#feature-catalogue">Feature catalogue</a> <br>
-              <a href="/about#terms-of-service">Terms and conditions</a>
-            </small>
-          </div>
-
-          <div class="col-md-6">
-            <small>
-              <a href="/about#data-privacy">Privacy and data collection</a> <br>
-              <a href="/about#acceptable-use">Acceptable use</a> <br>
-              <a href="/about#service-levels">Service levels</a>
-            </small>
-          </div>
-        </div>
-      </div>
-
-      <div class="col-6">
-        <div class="row">
-          <div class="col-md-6">
-            <h6>ACKNOWLEDGEMENTS</h6>
-            <p class="tight">
-              <small>
-                We acknowledge and pay respect to the Elders and Traditional Owners
-                of the lands on which our partner organisations stand.
-              </small>
-            </p>
-          </div>
-
-          <div class="col-md-6">
-            <h6>CONNECT</h6>
-            <p>
-              <a href="mailto:help@genome.edu.au">
-                <i class="fas fa-envelope"></i>
-              </a>
-
-              <a href="https://github.com/usegalaxy-au" target="_blank">
-                <i class="fab fa-github"></i>
-              </a>
-
-              <a href="https://twitter.com/galaxyaustralia" target="_blank">
-                <i class="fab fa-twitter"></i>
-              </a>
-            </p>
-          </div>
-        </div>
-      </div>
-    </div>
-  </div>
-</footer>
+<iframe id="footerIframe" style="width: 100%;" src="http://site.usegalaxy.org.au/embed/home/snippets/footer.html"></iframe>
+<script>
+  window.addEventListener("message", function(event) {
+    const iframe = document.getElementById('footerIframe');
+    const height = event.data.height + 'px';
+    console.log('Set footer height:', height);
+    iframe.style.height = height;
+  }, false);
+</script>

From dffa109e82c34b08ef1a9453c5dd1c41bf925edc Mon Sep 17 00:00:00 2001
From: Cameron Hyde <chyde@neoformit.com>
Date: Wed, 28 Aug 2024 13:46:32 +1000
Subject: [PATCH 2/3] Add comment to footer js

---
 webapp/home/labs/genome/templates/footer.html | 1 +
 1 file changed, 1 insertion(+)

diff --git a/webapp/home/labs/genome/templates/footer.html b/webapp/home/labs/genome/templates/footer.html
index 271df566..ef0af42d 100644
--- a/webapp/home/labs/genome/templates/footer.html
+++ b/webapp/home/labs/genome/templates/footer.html
@@ -1,5 +1,6 @@
 <iframe id="footerIframe" style="width: 100%;" src="http://site.usegalaxy.org.au/embed/home/snippets/footer.html"></iframe>
 <script>
+  // Dynamically resize the iframe based on the content height
   window.addEventListener("message", function(event) {
     const iframe = document.getElementById('footerIframe');
     const height = event.data.height + 'px';

From 2c2c95fc8c7755d48962e638c35e0ec94be35e62 Mon Sep 17 00:00:00 2001
From: Cameron Hyde <chyde@neoformit.com>
Date: Wed, 28 Aug 2024 13:48:45 +1000
Subject: [PATCH 3/3] Lab footers iframe src HTTPS

---
 webapp/home/labs/genome/templates/footer.html     | 2 +-
 webapp/home/labs/proteomics/templates/footer.html | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/webapp/home/labs/genome/templates/footer.html b/webapp/home/labs/genome/templates/footer.html
index ef0af42d..172d3c74 100644
--- a/webapp/home/labs/genome/templates/footer.html
+++ b/webapp/home/labs/genome/templates/footer.html
@@ -1,4 +1,4 @@
-<iframe id="footerIframe" style="width: 100%;" src="http://site.usegalaxy.org.au/embed/home/snippets/footer.html"></iframe>
+<iframe id="footerIframe" style="width: 100%;" src="https://site.usegalaxy.org.au/embed/home/snippets/footer.html"></iframe>
 <script>
   // Dynamically resize the iframe based on the content height
   window.addEventListener("message", function(event) {
diff --git a/webapp/home/labs/proteomics/templates/footer.html b/webapp/home/labs/proteomics/templates/footer.html
index 271df566..259d18e6 100644
--- a/webapp/home/labs/proteomics/templates/footer.html
+++ b/webapp/home/labs/proteomics/templates/footer.html
@@ -1,4 +1,4 @@
-<iframe id="footerIframe" style="width: 100%;" src="http://site.usegalaxy.org.au/embed/home/snippets/footer.html"></iframe>
+<iframe id="footerIframe" style="width: 100%;" src="https://site.usegalaxy.org.au/embed/home/snippets/footer.html"></iframe>
 <script>
   window.addEventListener("message", function(event) {
     const iframe = document.getElementById('footerIframe');