diff --git a/requests/singlecells.yml b/requests/singlecells.yml new file mode 100644 index 000000000..b36759184 --- /dev/null +++ b/requests/singlecells.yml @@ -0,0 +1,98 @@ +tools: +- name: scanpy_filter_cells + owner: ebi-gxa + revisions: + - 55ccc0a121bc + - e9283529cba1 + tool_panel_section_label: HCA Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu +- name: scanpy_filter_genes + owner: ebi-gxa + revisions: + - da611a744112 + - 474a69c47184 + tool_panel_section_label: HCA Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu +- name: scanpy_normalise_data + owner: ebi-gxa + revisions: + - 8d9c22419c56 + - 6b97ffba31da + tool_panel_section_label: HCA Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu +- name: scanpy_find_variable_genes + owner: ebi-gxa + revisions: + - 4667fe07bd68 + - 2861ca3bfe4d + tool_panel_section_label: HCA Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu +- name: scanpy_scale_data + owner: ebi-gxa + revisions: + - f86b2c3bc459 + - 5605f8452eb3 + tool_panel_section_label: HCA Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu +- name: scanpy_run_pca + owner: ebi-gxa + revisions: + - 59028945c857 + - 3ee74b58c72d + tool_panel_section_label: HCA Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu +- name: scanpy_compute_graph + owner: ebi-gxa + revisions: + - 6417cccad133 + - bc9e8de21efb + tool_panel_section_label: HCA Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu +- name: scanpy_run_tsne + owner: ebi-gxa + revisions: + - 181d61d2f3cd + - 8b0d6f6f44c8 + tool_panel_section_label: HCA Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu +- name: scanpy_run_umap + owner: ebi-gxa + revisions: + - bd4a244faeb8 + - fe562424a0a6 + tool_panel_section_label: HCA Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu +- name: scanpy_find_cluster + owner: ebi-gxa + revisions: + - ad6995afd2e6 + - 2ccd9f9e2cd0 + tool_panel_section_label: HCA Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu +- name: anndata_ops + owner: ebi-gxa + revisions: + - 890fb06a2893 + - 7ebc22f77d86 + tool_panel_section_label: Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu +- name: scanpy_find_markers + owner: ebi-gxa + revisions: + - 49653e680ea4 + - 81c34e67f262 + tool_panel_section_label: HCA Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu +- name: scanpy_plot_embed + owner: ebi-gxa + revisions: + - 56d22aa6cb3b + - 35f6611fb8c3 + tool_panel_section_label: HCA Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu +- name: scanpy_regress_variable + owner: ebi-gxa + revisions: + - 36daab33aecf + tool_panel_section_label: HCA Single-cell + tool_shed_url: toolshed.g2.bx.psu.edu