From b2627575991552e2fafe9efc3cae88a589e0bcc8 Mon Sep 17 00:00:00 2001 From: admin Date: Wed, 27 Sep 2023 06:10:01 +0000 Subject: [PATCH] Jenkins update build 165 errors --- requests/alphafold2@e4a053d67e24.yml | 7 +++++++ requests/bwa_mem2@bfaa0d22c2e4.yml | 7 +++++++ requests/cat_bins@31853794ace2.yml | 7 +++++++ requests/chipseeker@8bd92f2404dd.yml | 7 +++++++ requests/dada2_assigntaxonomyaddspecies@7c2100246a2f.yml | 7 +++++++ requests/eggnog_mapper@d9c3016f7283.yml | 7 +++++++ requests/encyclopedia_encyclopedia@eac99effe86f.yml | 7 +++++++ requests/encyclopedia_searchtolib@fb192dd6658a.yml | 7 +++++++ requests/encyclopedia_walnut@0d2e93e01e68.yml | 7 +++++++ requests/featurecounts@f9d49f5cb597.yml | 7 +++++++ requests/humann@fc6c328c292f.yml | 7 +++++++ requests/humann_regroup_table@e88b731dad59.yml | 7 +++++++ requests/humann_rename_table@094ad9c068af.yml | 7 +++++++ requests/merqury@09c589057ee8.yml | 7 +++++++ requests/openms_decoydatabase@25529df60a81.yml | 7 +++++++ requests/openms_targetedfileconverter@9c70a651a53e.yml | 7 +++++++ requests/openms_xmlvalidator@f036e8cf1a55.yml | 7 +++++++ requests/rgrnastar@79de45b5069b.yml | 7 +++++++ requests/rna_starsolo@5ef7ec16b04f.yml | 7 +++++++ 19 files changed, 133 insertions(+) create mode 100644 requests/alphafold2@e4a053d67e24.yml create mode 100644 requests/bwa_mem2@bfaa0d22c2e4.yml create mode 100644 requests/cat_bins@31853794ace2.yml create mode 100644 requests/chipseeker@8bd92f2404dd.yml create mode 100644 requests/dada2_assigntaxonomyaddspecies@7c2100246a2f.yml create mode 100644 requests/eggnog_mapper@d9c3016f7283.yml create mode 100644 requests/encyclopedia_encyclopedia@eac99effe86f.yml create mode 100644 requests/encyclopedia_searchtolib@fb192dd6658a.yml create mode 100644 requests/encyclopedia_walnut@0d2e93e01e68.yml create mode 100644 requests/featurecounts@f9d49f5cb597.yml create mode 100644 requests/humann@fc6c328c292f.yml create mode 100644 requests/humann_regroup_table@e88b731dad59.yml create mode 100644 requests/humann_rename_table@094ad9c068af.yml create mode 100644 requests/merqury@09c589057ee8.yml create mode 100644 requests/openms_decoydatabase@25529df60a81.yml create mode 100644 requests/openms_targetedfileconverter@9c70a651a53e.yml create mode 100644 requests/openms_xmlvalidator@f036e8cf1a55.yml create mode 100644 requests/rgrnastar@79de45b5069b.yml create mode 100644 requests/rna_starsolo@5ef7ec16b04f.yml diff --git a/requests/alphafold2@e4a053d67e24.yml b/requests/alphafold2@e4a053d67e24.yml new file mode 100644 index 000000000..0f62a365b --- /dev/null +++ b/requests/alphafold2@e4a053d67e24.yml @@ -0,0 +1,7 @@ +tools: +- name: alphafold2 + owner: galaxy-australia + revisions: + - e4a053d67e24 + tool_panel_section_label: Proteomic AI + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/bwa_mem2@bfaa0d22c2e4.yml b/requests/bwa_mem2@bfaa0d22c2e4.yml new file mode 100644 index 000000000..4d2a128f5 --- /dev/null +++ b/requests/bwa_mem2@bfaa0d22c2e4.yml @@ -0,0 +1,7 @@ +tools: +- name: bwa_mem2 + owner: iuc + revisions: + - bfaa0d22c2e4 + tool_panel_section_label: Mapping + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/cat_bins@31853794ace2.yml b/requests/cat_bins@31853794ace2.yml new file mode 100644 index 000000000..b7872c6c8 --- /dev/null +++ b/requests/cat_bins@31853794ace2.yml @@ -0,0 +1,7 @@ +tools: +- name: cat_bins + owner: iuc + revisions: + - 31853794ace2 + tool_panel_section_label: Metagenomic Analysis + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/chipseeker@8bd92f2404dd.yml b/requests/chipseeker@8bd92f2404dd.yml new file mode 100644 index 000000000..df24cbe71 --- /dev/null +++ b/requests/chipseeker@8bd92f2404dd.yml @@ -0,0 +1,7 @@ +tools: +- name: chipseeker + owner: rnateam + revisions: + - 8bd92f2404dd + tool_panel_section_label: Annotation + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/dada2_assigntaxonomyaddspecies@7c2100246a2f.yml b/requests/dada2_assigntaxonomyaddspecies@7c2100246a2f.yml new file mode 100644 index 000000000..2f19481d7 --- /dev/null +++ b/requests/dada2_assigntaxonomyaddspecies@7c2100246a2f.yml @@ -0,0 +1,7 @@ +tools: +- name: dada2_assigntaxonomyaddspecies + owner: iuc + revisions: + - 7c2100246a2f + tool_panel_section_label: Metagenomic Analysis + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/eggnog_mapper@d9c3016f7283.yml b/requests/eggnog_mapper@d9c3016f7283.yml new file mode 100644 index 000000000..5bb3c8b1d --- /dev/null +++ b/requests/eggnog_mapper@d9c3016f7283.yml @@ -0,0 +1,7 @@ +tools: +- name: eggnog_mapper + owner: galaxyp + revisions: + - d9c3016f7283 + tool_panel_section_label: Annotation + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/encyclopedia_encyclopedia@eac99effe86f.yml b/requests/encyclopedia_encyclopedia@eac99effe86f.yml new file mode 100644 index 000000000..ad2d716d2 --- /dev/null +++ b/requests/encyclopedia_encyclopedia@eac99effe86f.yml @@ -0,0 +1,7 @@ +tools: +- name: encyclopedia_encyclopedia + owner: galaxyp + revisions: + - eac99effe86f + tool_panel_section_label: Proteomics + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/encyclopedia_searchtolib@fb192dd6658a.yml b/requests/encyclopedia_searchtolib@fb192dd6658a.yml new file mode 100644 index 000000000..3059c7029 --- /dev/null +++ b/requests/encyclopedia_searchtolib@fb192dd6658a.yml @@ -0,0 +1,7 @@ +tools: +- name: encyclopedia_searchtolib + owner: galaxyp + revisions: + - fb192dd6658a + tool_panel_section_label: Proteomics + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/encyclopedia_walnut@0d2e93e01e68.yml b/requests/encyclopedia_walnut@0d2e93e01e68.yml new file mode 100644 index 000000000..e83131bfb --- /dev/null +++ b/requests/encyclopedia_walnut@0d2e93e01e68.yml @@ -0,0 +1,7 @@ +tools: +- name: encyclopedia_walnut + owner: galaxyp + revisions: + - 0d2e93e01e68 + tool_panel_section_label: Proteomics + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/featurecounts@f9d49f5cb597.yml b/requests/featurecounts@f9d49f5cb597.yml new file mode 100644 index 000000000..8b81b4081 --- /dev/null +++ b/requests/featurecounts@f9d49f5cb597.yml @@ -0,0 +1,7 @@ +tools: +- name: featurecounts + owner: iuc + revisions: + - f9d49f5cb597 + tool_panel_section_label: RNA-seq + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/humann@fc6c328c292f.yml b/requests/humann@fc6c328c292f.yml new file mode 100644 index 000000000..493b85ba9 --- /dev/null +++ b/requests/humann@fc6c328c292f.yml @@ -0,0 +1,7 @@ +tools: +- name: humann + owner: iuc + revisions: + - fc6c328c292f + tool_panel_section_label: Metagenomic Analysis + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/humann_regroup_table@e88b731dad59.yml b/requests/humann_regroup_table@e88b731dad59.yml new file mode 100644 index 000000000..cf12b231b --- /dev/null +++ b/requests/humann_regroup_table@e88b731dad59.yml @@ -0,0 +1,7 @@ +tools: +- name: humann_regroup_table + owner: iuc + revisions: + - e88b731dad59 + tool_panel_section_label: Metagenomic Analysis + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/humann_rename_table@094ad9c068af.yml b/requests/humann_rename_table@094ad9c068af.yml new file mode 100644 index 000000000..c0c131865 --- /dev/null +++ b/requests/humann_rename_table@094ad9c068af.yml @@ -0,0 +1,7 @@ +tools: +- name: humann_rename_table + owner: iuc + revisions: + - 094ad9c068af + tool_panel_section_label: Metagenomic Analysis + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/merqury@09c589057ee8.yml b/requests/merqury@09c589057ee8.yml new file mode 100644 index 000000000..886bd57c8 --- /dev/null +++ b/requests/merqury@09c589057ee8.yml @@ -0,0 +1,7 @@ +tools: +- name: merqury + owner: iuc + revisions: + - 09c589057ee8 + tool_panel_section_label: Assembly + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/openms_decoydatabase@25529df60a81.yml b/requests/openms_decoydatabase@25529df60a81.yml new file mode 100644 index 000000000..96975cbad --- /dev/null +++ b/requests/openms_decoydatabase@25529df60a81.yml @@ -0,0 +1,7 @@ +tools: +- name: openms_decoydatabase + owner: galaxyp + revisions: + - 25529df60a81 + tool_panel_section_label: Proteomics + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/openms_targetedfileconverter@9c70a651a53e.yml b/requests/openms_targetedfileconverter@9c70a651a53e.yml new file mode 100644 index 000000000..12c0fa4cf --- /dev/null +++ b/requests/openms_targetedfileconverter@9c70a651a53e.yml @@ -0,0 +1,7 @@ +tools: +- name: openms_targetedfileconverter + owner: galaxyp + revisions: + - 9c70a651a53e + tool_panel_section_label: Proteomics + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/openms_xmlvalidator@f036e8cf1a55.yml b/requests/openms_xmlvalidator@f036e8cf1a55.yml new file mode 100644 index 000000000..3b753c4d1 --- /dev/null +++ b/requests/openms_xmlvalidator@f036e8cf1a55.yml @@ -0,0 +1,7 @@ +tools: +- name: openms_xmlvalidator + owner: galaxyp + revisions: + - f036e8cf1a55 + tool_panel_section_label: Proteomics + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/rgrnastar@79de45b5069b.yml b/requests/rgrnastar@79de45b5069b.yml new file mode 100644 index 000000000..5ba3387c2 --- /dev/null +++ b/requests/rgrnastar@79de45b5069b.yml @@ -0,0 +1,7 @@ +tools: +- name: rgrnastar + owner: iuc + revisions: + - 79de45b5069b + tool_panel_section_label: RNA-seq + tool_shed_url: toolshed.g2.bx.psu.edu diff --git a/requests/rna_starsolo@5ef7ec16b04f.yml b/requests/rna_starsolo@5ef7ec16b04f.yml new file mode 100644 index 000000000..dc9203b62 --- /dev/null +++ b/requests/rna_starsolo@5ef7ec16b04f.yml @@ -0,0 +1,7 @@ +tools: +- name: rna_starsolo + owner: iuc + revisions: + - 5ef7ec16b04f + tool_panel_section_label: Mapping + tool_shed_url: toolshed.g2.bx.psu.edu