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Saimiri boliviensis mSaiBol1 #194

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merged 3 commits into from
Feb 20, 2025
Merged

Saimiri boliviensis mSaiBol1 #194

merged 3 commits into from
Feb 20, 2025

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bhkoo
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@bhkoo bhkoo commented Feb 19, 2025

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@bgruening
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@bhkoo do you want to use galaxy-social for posting to the VGP mastodon / bluesky channel?

If so we need to configure this once and you need to share API keys for mastodon and bluesky with us (this repo).

- mastodon-galaxyproject
- bluesky-galaxyproject
- linkedin-galaxyproject
- mastodon-vgp
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@bhkoo bhkoo Feb 19, 2025

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Hi Bjorn, @scottcain should have added the plugins for VGP Mastodon and Bluesky to the yml earlier today.

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Yeah, I did. @arash77 do you think this the fact that this is a PR from a fork rather than a branch is causing a problem?

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I kind of bet the fact it's a fork is the problem--the secrets aren't in the fork. @bhkoo could you try again but this time from a branch?

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Yeah, I did. @arash77 do you think this the fact that this is a PR from a fork rather than a branch is causing a problem?

No, the problem here is that you have to give access to those secrets in:
https://github.com/usegalaxy-eu/galaxy-social/blob/main/.github/workflows/galaxy_social.yml

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We need to document this :) "Howto add new plugins."

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We need to document this :) "Howto add new plugins."

We already have it! in step 6:
https://github.com/usegalaxy-eu/galaxy-social?tab=readme-ov-file#add-a-new-social-media-platform

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I should add another workflow to check the process of adding new social media.

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Ha, nice! ping @scottcain :)

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lol, so you're saying there's already documentation, and it's sitting right there in the README; who would have guessed? :-) Thanks!

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👋 Hello! I'm your friendly social media assistant. Below are the previews of this post:
posts/2025/2025-02-19-Saimiri_boliviensis-mSaiBol1.md

mastodon-vgp

The curation of the Saimiri boliviensis (Bolivian squirrel monkey) genome, mSaiBol1 has been completed. Files are available on GenomeArk: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Saimiri_boliviensis/mSaiBol1/assembly_curated/

Assembly was done by Linelle Abueg on Galaxy. Curation was done by Erick Duarte, with comments from Jo Wood at the Wellcome Sanger Trust Institute. Kirsty McCaffrey for performed QC on this curation.

Photo credit: https://www.inaturalist.org/photos/10261876

@[email protected]
#UseGalaxy (1/1)

A

bluesky-vgp

The curation of the Saimiri boliviensis (Bolivian squirrel monkey) genome, mSaiBol1 has been completed. Files are available on GenomeArk: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Saimiri_boliviensis/mSaiBol1/assembly_curated/

Assembly was done by Linelle Abueg on Galaxy. (1/2)

Curation was done by Erick Duarte, with comments from Jo Wood at the Wellcome Sanger Trust Institute. Kirsty McCaffrey for performed QC on this curation.

Photo credit: https://www.inaturalist.org/photos/10261876

@galaxyproject.bsky.social
#UseGalaxy (2/2)

A

mastodon-galaxyproject

The curation of the Saimiri boliviensis (Bolivian squirrel monkey) genome, mSaiBol1 has been completed. Files are available on GenomeArk: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Saimiri_boliviensis/mSaiBol1/assembly_curated/

Assembly was done by Linelle Abueg on Galaxy. Curation was done by Erick Duarte, with comments from Jo Wood at the Wellcome Sanger Trust Institute. Kirsty McCaffrey for performed QC on this curation.

Photo credit: https://www.inaturalist.org/photos/10261876

@[email protected]
#UseGalaxy #VertebrateGenomesProject (1/1)

A

bluesky-galaxyproject

The curation of the Saimiri boliviensis (Bolivian squirrel monkey) genome, mSaiBol1 has been completed. Files are available on GenomeArk: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Saimiri_boliviensis/mSaiBol1/assembly_curated/

Assembly was done by Linelle Abueg on Galaxy. (1/2)

Curation was done by Erick Duarte, with comments from Jo Wood at the Wellcome Sanger Trust Institute. Kirsty McCaffrey for performed QC on this curation.

Photo credit: https://www.inaturalist.org/photos/10261876

@vertebrategenomes.bsky.social
#UseGalaxy #VertebrateGenomesProject (2/2)

A

linkedin-galaxyproject

The curation of the Saimiri boliviensis (Bolivian squirrel monkey) genome, mSaiBol1 has been completed. Files are available on GenomeArk: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Saimiri_boliviensis/mSaiBol1/assembly_curated/

Assembly was done by Linelle Abueg on Galaxy. Curation was done by Erick Duarte, with comments from Jo Wood at the Wellcome Sanger Trust Institute. Kirsty McCaffrey for performed QC on this curation.

Photo credit: https://www.inaturalist.org/photos/10261876

#UseGalaxy #VertebrateGenomesProject

A

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Looks good to me--notice that the bluesky post is broken into two posts, but I think it will look fine the way it's broken up.

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@bhkoo if you want to hit merge now, you can and they'll post.

@bhkoo bhkoo merged commit 8127b87 into usegalaxy-eu:main Feb 20, 2025
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🎉 The post is now online. The links may take a few minutes to become active. Here are the links for this post:
posts/2025/2025-02-19-Saimiri_boliviensis-mSaiBol1.md

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4 participants