-
Notifications
You must be signed in to change notification settings - Fork 9
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Saimiri boliviensis mSaiBol1 #194
Merged
Merged
Changes from all commits
Commits
Show all changes
3 commits
Select commit
Hold shift + click to select a range
File filter
Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,40 @@ | ||
| --- | ||
| media: | ||
| - mastodon-galaxyproject | ||
| - bluesky-galaxyproject | ||
| - linkedin-galaxyproject | ||
| - mastodon-vgp | ||
| - bluesky-vgp | ||
|
|
||
| hashtags: | ||
| mastodon-galaxyproject: | ||
| - UseGalaxy | ||
| - VertebrateGenomesProject | ||
| bluesky-galaxyproject: | ||
| - UseGalaxy | ||
| - VertebrateGenomesProject | ||
| linkedin-galaxyproject: | ||
| - UseGalaxy | ||
| - VertebrateGenomesProject | ||
| mastodon-vgp: | ||
| - UseGalaxy | ||
| bluesky-vgp: | ||
| - UseGalaxy | ||
|
|
||
| mentions: | ||
| mastodon-galaxyproject: | ||
| - [email protected] | ||
| bluesky-galaxyproject: | ||
| - vertebrategenomes.bsky.social | ||
| mastodon-vgp: | ||
| - [email protected] | ||
| bluesky-vgp: | ||
| - galaxyproject.bsky.social | ||
| --- | ||
|  | ||
|
|
||
| The curation of the Saimiri boliviensis (Bolivian squirrel monkey) genome, mSaiBol1 has been completed. Files are available on GenomeArk: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Saimiri_boliviensis/mSaiBol1/assembly_curated/ | ||
|
|
||
| Assembly was done by Linelle Abueg on Galaxy. Curation was done by Erick Duarte, with comments from Jo Wood at the Wellcome Sanger Trust Institute. Kirsty McCaffrey for performed QC on this curation. | ||
|
|
||
| Photo credit: https://www.inaturalist.org/photos/10261876 | ||
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
You need to add those plugins to https://github.com/usegalaxy-eu/galaxy-social/blob/main/plugins.yml
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Hi Bjorn, @scottcain should have added the plugins for VGP Mastodon and Bluesky to the yml earlier today.
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Yeah, I did. @arash77 do you think this the fact that this is a PR from a fork rather than a branch is causing a problem?
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
I kind of bet the fact it's a fork is the problem--the secrets aren't in the fork. @bhkoo could you try again but this time from a branch?
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
No, the problem here is that you have to give access to those secrets in:
https://github.com/usegalaxy-eu/galaxy-social/blob/main/.github/workflows/galaxy_social.yml
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
We need to document this :) "Howto add new plugins."
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
We already have it! in step 6:
https://github.com/usegalaxy-eu/galaxy-social?tab=readme-ov-file#add-a-new-social-media-platform
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
I should add another workflow to check the process of adding new social media.
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Ha, nice! ping @scottcain :)
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
lol, so you're saying there's already documentation, and it's sitting right there in the README; who would have guessed? :-) Thanks!