From f6b8b9c2ebfe2fa0b4724d12b33358418ad7254f Mon Sep 17 00:00:00 2001 From: Mira Kuntz Date: Mon, 11 Mar 2024 15:31:48 +0100 Subject: [PATCH 01/24] add e5020 --- resources.yaml | 21 +++++++++++---------- 1 file changed, 11 insertions(+), 10 deletions(-) diff --git a/resources.yaml b/resources.yaml index 6061073..07d8f0d 100644 --- a/resources.yaml +++ b/resources.yaml @@ -247,13 +247,15 @@ deployment: secondary_htcondor_cluster: true # Trainings - # These will overlap Mar 12-15 + # These will overlap Mar 18-20 training-eml: count: 1 flavor: c1.c28m225d50 start: 2024-03-12 end: 2024-03-18 group: training-eml + image: htcondor-secondary + secondary_htcondor_cluster: true training-kmb6: count: 2 flavor: c1.c28m225d50 @@ -262,14 +264,6 @@ deployment: group: training-kmb615 image: htcondor-secondary secondary_htcondor_cluster: true - training-path-gen-march-24: - count: 2 - flavor: c1.c28m225d50 - start: 2024-03-04 - end: 2024-03-15 - group: training-path-gen-march-24 - image: htcondor-secondary - secondary_htcondor_cluster: true training-msc-exeter: count: 2 flavor: c1.c28m225d50 @@ -278,7 +272,6 @@ deployment: group: training-msc-exeter image: htcondor-secondary secondary_htcondor_cluster: true - training-asse: count: 1 flavor: c1.c28m225d50 @@ -295,6 +288,14 @@ deployment: group: training-gie-0324 image: htcondor-secondary secondary_htcondor_cluster: true + training-e5020: + count: 2 + flavor: c1.c28m225d50 + start: 2024-03-19 + end: 2024-03-19 + group: training-e5020-2024-03-19 + image: htcondor-secondary + secondary_htcondor_cluster: true training-nort: count: 2 From f3aa71e3a42bbde632d5d7fcbb617d9e01b1140f Mon Sep 17 00:00:00 2001 From: Mira Kuntz Date: Mon, 11 Mar 2024 15:46:49 +0100 Subject: [PATCH 02/24] add gmc --- resources.yaml | 10 +++++++++- 1 file changed, 9 insertions(+), 1 deletion(-) diff --git a/resources.yaml b/resources.yaml index 07d8f0d..bde6085 100644 --- a/resources.yaml +++ b/resources.yaml @@ -289,13 +289,21 @@ deployment: image: htcondor-secondary secondary_htcondor_cluster: true training-e5020: - count: 2 + count: 1 flavor: c1.c28m225d50 start: 2024-03-19 end: 2024-03-19 group: training-e5020-2024-03-19 image: htcondor-secondary secondary_htcondor_cluster: true + training-gmc: + count: 1 + flavor: c1.c28m225d50 + start: 2024-03-18 + end: 2024-03-26 + group: training-gmc + image: htcondor-secondary + secondary_htcondor_cluster: true training-nort: count: 2 From 8d5515f01debaee71cc01f33b8a9ef2bb08200cf Mon Sep 17 00:00:00 2001 From: Mira Kuntz Date: Mon, 11 Mar 2024 15:49:41 +0100 Subject: [PATCH 03/24] change date gmc --- resources.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/resources.yaml b/resources.yaml index bde6085..36de6a9 100644 --- a/resources.yaml +++ b/resources.yaml @@ -299,7 +299,7 @@ deployment: training-gmc: count: 1 flavor: c1.c28m225d50 - start: 2024-03-18 + start: 2024-03-19 end: 2024-03-26 group: training-gmc image: htcondor-secondary From d602f08d67e9ba19afa63d43a596ae4bee354766 Mon Sep 17 00:00:00 2001 From: Mira Kuntz Date: Mon, 11 Mar 2024 15:57:17 +0100 Subject: [PATCH 04/24] change distribution --- resources.yaml | 9 +++++---- 1 file changed, 5 insertions(+), 4 deletions(-) diff --git a/resources.yaml b/resources.yaml index 36de6a9..8dbab84 100644 --- a/resources.yaml +++ b/resources.yaml @@ -247,7 +247,7 @@ deployment: secondary_htcondor_cluster: true # Trainings - # These will overlap Mar 18-20 + # These will overlap Mar 18 and partly Mar 19-22 training-eml: count: 1 flavor: c1.c28m225d50 @@ -257,7 +257,7 @@ deployment: image: htcondor-secondary secondary_htcondor_cluster: true training-kmb6: - count: 2 + count: 1 flavor: c1.c28m225d50 start: 2024-03-01 end: 2024-05-17 @@ -265,7 +265,7 @@ deployment: image: htcondor-secondary secondary_htcondor_cluster: true training-msc-exeter: - count: 2 + count: 1 flavor: c1.c28m225d50 start: 2024-03-06 end: 2024-03-20 @@ -273,7 +273,7 @@ deployment: image: htcondor-secondary secondary_htcondor_cluster: true training-asse: - count: 1 + count: 2 flavor: c1.c28m225d50 start: 2024-03-18 end: 2024-03-22 @@ -288,6 +288,7 @@ deployment: group: training-gie-0324 image: htcondor-secondary secondary_htcondor_cluster: true + training-e5020: count: 1 flavor: c1.c28m225d50 From c38e690c22ef85ed7f5e4d463ab9eba9da520ae0 Mon Sep 17 00:00:00 2001 From: Mira Kuntz Date: Mon, 11 Mar 2024 16:00:10 +0100 Subject: [PATCH 05/24] change distribution --- resources.yaml | 39 +++------------------------------------ 1 file changed, 3 insertions(+), 36 deletions(-) diff --git a/resources.yaml b/resources.yaml index 8dbab84..1619ba6 100644 --- a/resources.yaml +++ b/resources.yaml @@ -247,15 +247,7 @@ deployment: secondary_htcondor_cluster: true # Trainings - # These will overlap Mar 18 and partly Mar 19-22 - training-eml: - count: 1 - flavor: c1.c28m225d50 - start: 2024-03-12 - end: 2024-03-18 - group: training-eml - image: htcondor-secondary - secondary_htcondor_cluster: true + # These will overlap Mar 18 and partly Mar 21-22 training-kmb6: count: 1 flavor: c1.c28m225d50 @@ -264,41 +256,16 @@ deployment: group: training-kmb615 image: htcondor-secondary secondary_htcondor_cluster: true - training-msc-exeter: - count: 1 - flavor: c1.c28m225d50 - start: 2024-03-06 - end: 2024-03-20 - group: training-msc-exeter - image: htcondor-secondary - secondary_htcondor_cluster: true training-asse: - count: 2 + count: 4 flavor: c1.c28m225d50 start: 2024-03-18 end: 2024-03-22 group: training-assemblyannotation image: htcondor-secondary secondary_htcondor_cluster: true - training-gie-: - count: 1 - flavor: c1.c28m225d50 - start: 2024-03-18 - end: 2024-03-19 - group: training-gie-0324 - image: htcondor-secondary - secondary_htcondor_cluster: true - - training-e5020: - count: 1 - flavor: c1.c28m225d50 - start: 2024-03-19 - end: 2024-03-19 - group: training-e5020-2024-03-19 - image: htcondor-secondary - secondary_htcondor_cluster: true training-gmc: - count: 1 + count: 2 flavor: c1.c28m225d50 start: 2024-03-19 end: 2024-03-26 From d9e37d9968ed1deef46356f3778546a0ed585b3a Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B6rn=20Gr=C3=BCning?= Date: Tue, 12 Mar 2024 19:23:35 +0100 Subject: [PATCH 06/24] add cat training --- resources.yaml | 7 ++++++- 1 file changed, 6 insertions(+), 1 deletion(-) diff --git a/resources.yaml b/resources.yaml index e7b7763..0fe7312 100644 --- a/resources.yaml +++ b/resources.yaml @@ -297,7 +297,12 @@ deployment: group: training-gie-0324 image: htcondor-secondary secondary_htcondor_cluster: true - + training-geno: + count: 2 + flavor: c1.c28m225d50 + start: 2024-05-07 + end: 2024-05-10 + group: training-genome-assembly-2024 training-nort: count: 2 flavor: c1.c28m225d50 From 11ef4a50693253820ba736328f2384c2b30e4359 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B6rn=20Gr=C3=BCning?= Date: Wed, 13 Mar 2024 08:34:14 +0100 Subject: [PATCH 07/24] Update resources.yaml Co-authored-by: Mira <86979912+mira-miracoli@users.noreply.github.com> --- resources.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/resources.yaml b/resources.yaml index 0fe7312..69c2b3b 100644 --- a/resources.yaml +++ b/resources.yaml @@ -297,7 +297,7 @@ deployment: group: training-gie-0324 image: htcondor-secondary secondary_htcondor_cluster: true - training-geno: + training-geno: count: 2 flavor: c1.c28m225d50 start: 2024-05-07 From a022981b6f3c022b6fe42f7ec9ee377e93bdaa9d Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B6rn=20Gr=C3=BCning?= Date: Wed, 13 Mar 2024 08:34:24 +0100 Subject: [PATCH 08/24] Update resources.yaml Co-authored-by: Mira <86979912+mira-miracoli@users.noreply.github.com> --- resources.yaml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/resources.yaml b/resources.yaml index 69c2b3b..b909438 100644 --- a/resources.yaml +++ b/resources.yaml @@ -303,6 +303,8 @@ deployment: start: 2024-05-07 end: 2024-05-10 group: training-genome-assembly-2024 + image: htcondor-secondary + secondary_htcondor_cluster: true training-nort: count: 2 flavor: c1.c28m225d50 From 32e27eea77f71ad9206efdab64a9b35ba2ec7d5d Mon Sep 17 00:00:00 2001 From: Mira <86979912+mira-miracoli@users.noreply.github.com> Date: Wed, 13 Mar 2024 08:55:50 +0100 Subject: [PATCH 09/24] Update resources.yaml --- resources.yaml | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/resources.yaml b/resources.yaml index b909438..f55085b 100644 --- a/resources.yaml +++ b/resources.yaml @@ -298,11 +298,11 @@ deployment: image: htcondor-secondary secondary_htcondor_cluster: true training-geno: - count: 2 - flavor: c1.c28m225d50 - start: 2024-05-07 - end: 2024-05-10 - group: training-genome-assembly-2024 + count: 2 + flavor: c1.c28m225d50 + start: 2024-05-07 + end: 2024-05-10 + group: training-genome-assembly-2024 image: htcondor-secondary secondary_htcondor_cluster: true training-nort: From 98b4b999883dc148fbbca704e18a7b9cb16d6c4e Mon Sep 17 00:00:00 2001 From: Mira <86979912+mira-miracoli@users.noreply.github.com> Date: Wed, 13 Mar 2024 08:55:57 +0100 Subject: [PATCH 10/24] Update resources.yaml --- resources.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/resources.yaml b/resources.yaml index f55085b..3951850 100644 --- a/resources.yaml +++ b/resources.yaml @@ -303,8 +303,8 @@ deployment: start: 2024-05-07 end: 2024-05-10 group: training-genome-assembly-2024 - image: htcondor-secondary - secondary_htcondor_cluster: true + image: htcondor-secondary + secondary_htcondor_cluster: true training-nort: count: 2 flavor: c1.c28m225d50 From e88454f685c05eb6695c28ca30f532cc61e7a0b9 Mon Sep 17 00:00:00 2001 From: Mira Kuntz Date: Wed, 13 Mar 2024 15:32:27 +0100 Subject: [PATCH 11/24] add rocky9 "training" --- resources.yaml | 10 ++++++++++ 1 file changed, 10 insertions(+) diff --git a/resources.yaml b/resources.yaml index 3951850..a206dd4 100644 --- a/resources.yaml +++ b/resources.yaml @@ -6,6 +6,7 @@ images: secure: vggp-v60-secure-j322-692e75a7c101-main htcondor-secondary: vgcn~workers+internal~rockylinux-8.6-x86_64~2023-10-26~43739~htcondor-secondary~ebb20b8~kysrpex_local_build htcondor-secondary-gpu: vgcn~workers-gpu+internal~rockylinux-8.6-x86_64~2023-11-16~34096~htcondor-secondary~a23fbb0~kysrpex_local_build + rocky-9: vgcn~rockylinux-9-latest-x86_64~+generic+workers+internal~20240307~38383~dev~5809053~non_gpu_locally_built_by_mira network: bioinf secgroups: - ufr-ingress @@ -321,3 +322,12 @@ deployment: group: training-joca-epigenomics-24 image: htcondor-secondary secondary_htcondor_cluster: true + + training-test-rocky-9: + count: 2 + flavor: c1.c28m225d50 + start: 2024-03-13 + end: 2024-03-20 + group: training-joca-epigenomics-24 + image: rocky-9 + secondary_htcondor_cluster: true \ No newline at end of file From 7235b31d8408db13e4d5dce1501f74bb22ff5165 Mon Sep 17 00:00:00 2001 From: Mira Kuntz Date: Wed, 13 Mar 2024 15:33:01 +0100 Subject: [PATCH 12/24] nl --- resources.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/resources.yaml b/resources.yaml index a206dd4..0e77a37 100644 --- a/resources.yaml +++ b/resources.yaml @@ -330,4 +330,4 @@ deployment: end: 2024-03-20 group: training-joca-epigenomics-24 image: rocky-9 - secondary_htcondor_cluster: true \ No newline at end of file + secondary_htcondor_cluster: true From ce91af1badef247bf14246da384d912285841c35 Mon Sep 17 00:00:00 2001 From: Mira Kuntz Date: Wed, 13 Mar 2024 15:36:53 +0100 Subject: [PATCH 13/24] rename group --- resources.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/resources.yaml b/resources.yaml index 0e77a37..1bad6ec 100644 --- a/resources.yaml +++ b/resources.yaml @@ -328,6 +328,6 @@ deployment: flavor: c1.c28m225d50 start: 2024-03-13 end: 2024-03-20 - group: training-joca-epigenomics-24 + group: training-rocky9-test image: rocky-9 secondary_htcondor_cluster: true From d2b95adf830d5d2979b084d656344852ba9962d4 Mon Sep 17 00:00:00 2001 From: Mira Kuntz Date: Wed, 13 Mar 2024 15:54:58 +0100 Subject: [PATCH 14/24] use one vm --- resources.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/resources.yaml b/resources.yaml index 1bad6ec..e1d6383 100644 --- a/resources.yaml +++ b/resources.yaml @@ -258,7 +258,7 @@ deployment: image: htcondor-secondary secondary_htcondor_cluster: true training-kmb6: - count: 2 + count: 1 flavor: c1.c28m225d50 start: 2024-03-01 end: 2024-05-17 @@ -324,7 +324,7 @@ deployment: secondary_htcondor_cluster: true training-test-rocky-9: - count: 2 + count: 1 flavor: c1.c28m225d50 start: 2024-03-13 end: 2024-03-20 From 518e268a107e27bbc712b6d0d5f53b1352f5bfcc Mon Sep 17 00:00:00 2001 From: Mira Kuntz Date: Wed, 13 Mar 2024 15:56:08 +0100 Subject: [PATCH 15/24] limit to 17th --- resources.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/resources.yaml b/resources.yaml index e1d6383..48c9168 100644 --- a/resources.yaml +++ b/resources.yaml @@ -327,7 +327,7 @@ deployment: count: 1 flavor: c1.c28m225d50 start: 2024-03-13 - end: 2024-03-20 + end: 2024-03-17 group: training-rocky9-test image: rocky-9 secondary_htcondor_cluster: true From 6b702dd9087f0ee8a694243909c5b2481d8c26d2 Mon Sep 17 00:00:00 2001 From: Mira <86979912+mira-miracoli@users.noreply.github.com> Date: Thu, 14 Mar 2024 13:22:15 +0100 Subject: [PATCH 16/24] no kernel-lt image --- resources.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/resources.yaml b/resources.yaml index 48c9168..104d79d 100644 --- a/resources.yaml +++ b/resources.yaml @@ -6,7 +6,7 @@ images: secure: vggp-v60-secure-j322-692e75a7c101-main htcondor-secondary: vgcn~workers+internal~rockylinux-8.6-x86_64~2023-10-26~43739~htcondor-secondary~ebb20b8~kysrpex_local_build htcondor-secondary-gpu: vgcn~workers-gpu+internal~rockylinux-8.6-x86_64~2023-11-16~34096~htcondor-secondary~a23fbb0~kysrpex_local_build - rocky-9: vgcn~rockylinux-9-latest-x86_64~+generic+workers+internal~20240307~38383~dev~5809053~non_gpu_locally_built_by_mira + rocky-9: vgcn~rockylinux-9-latest-x86_64~+generic+workers+internal~20240314~40429~dev~9f80854~2nd_test_no_kernel_lt_by_mira network: bioinf secgroups: - ufr-ingress From 0dd5dc3926ddcf4bc55358731985eb773c65bdd3 Mon Sep 17 00:00:00 2001 From: Mira <86979912+mira-miracoli@users.noreply.github.com> Date: Mon, 18 Mar 2024 09:25:15 +0100 Subject: [PATCH 17/24] Update resources.yaml --- resources.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/resources.yaml b/resources.yaml index 2b8e317..732209c 100644 --- a/resources.yaml +++ b/resources.yaml @@ -338,7 +338,7 @@ deployment: count: 1 flavor: c1.c28m225d50 start: 2024-03-13 - end: 2024-03-17 + end: 2024-03-18 group: training-rocky9-test image: rocky-9 secondary_htcondor_cluster: true From c02aa3055ef34ce215d8b2e1f907ed64acb6c32e Mon Sep 17 00:00:00 2001 From: Mira <86979912+mira-miracoli@users.noreply.github.com> Date: Mon, 18 Mar 2024 10:13:53 +0100 Subject: [PATCH 18/24] witch some gpu nodes to new image --- resources.yaml | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/resources.yaml b/resources.yaml index 732209c..1ee466f 100644 --- a/resources.yaml +++ b/resources.yaml @@ -2,10 +2,9 @@ # Global configuration of computing nodes. images: default: vggp-v60-j322-692e75a7c101-main - gpu: vggp-v60-gpu-j322-692e75a7c101-main-kernel-4.18.0-477.21.1.el8_8-nvidia + gpu: vgcn~rockylinux-9-latest-x86_64~+generic+workers-gpu+internal~20240314~56675~dev~8d452de~2nd_test_no_kernel_lt_by_mira secure: vggp-v60-secure-j322-692e75a7c101-main htcondor-secondary: vgcn~workers+internal~rockylinux-8.6-x86_64~2023-10-26~43739~htcondor-secondary~ebb20b8~kysrpex_local_build - htcondor-secondary-gpu: vgcn~workers-gpu+internal~rockylinux-8.6-x86_64~2023-11-16~34096~htcondor-secondary~a23fbb0~kysrpex_local_build rocky-9: vgcn~rockylinux-9-latest-x86_64~+generic+workers+internal~20240314~40429~dev~9f80854~2nd_test_no_kernel_lt_by_mira network: bioinf secgroups: @@ -244,7 +243,7 @@ deployment: cgroups: mem_limit_policy: soft mem_reserved_size: 1024 - image: htcondor-secondary-gpu + image: gpu secondary_htcondor_cluster: true # Trainings From 3208e41da484605bd073aa897a1c86378fc8b817 Mon Sep 17 00:00:00 2001 From: Mira <86979912+mira-miracoli@users.noreply.github.com> Date: Mon, 18 Mar 2024 13:45:18 +0100 Subject: [PATCH 19/24] secondary gpu image still needed --- resources.yaml | 1 + 1 file changed, 1 insertion(+) diff --git a/resources.yaml b/resources.yaml index 1ee466f..ee91cc8 100644 --- a/resources.yaml +++ b/resources.yaml @@ -5,6 +5,7 @@ images: gpu: vgcn~rockylinux-9-latest-x86_64~+generic+workers-gpu+internal~20240314~56675~dev~8d452de~2nd_test_no_kernel_lt_by_mira secure: vggp-v60-secure-j322-692e75a7c101-main htcondor-secondary: vgcn~workers+internal~rockylinux-8.6-x86_64~2023-10-26~43739~htcondor-secondary~ebb20b8~kysrpex_local_build + htcondor-secondary-gpu: vgcn~workers-gpu+internal~rockylinux-8.6-x86_64~2023-11-16~34096~htcondor-secondary~a23fbb0~kysrpex_local_build rocky-9: vgcn~rockylinux-9-latest-x86_64~+generic+workers+internal~20240314~40429~dev~9f80854~2nd_test_no_kernel_lt_by_mira network: bioinf secgroups: From 488be9624c05ae0954674eefcc9167fad1ee50f5 Mon Sep 17 00:00:00 2001 From: Mira <86979912+mira-miracoli@users.noreply.github.com> Date: Mon, 18 Mar 2024 14:00:52 +0100 Subject: [PATCH 20/24] drained the wrong vms --- resources.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/resources.yaml b/resources.yaml index ee91cc8..dbd6acb 100644 --- a/resources.yaml +++ b/resources.yaml @@ -231,7 +231,7 @@ deployment: cgroups: mem_limit_policy: soft mem_reserved_size: 1024 - image: htcondor-secondary-gpu + image: gpu secondary_htcondor_cluster: true worker-c8m40g1-htcondor-secondary: count: 4 #4 @@ -244,7 +244,7 @@ deployment: cgroups: mem_limit_policy: soft mem_reserved_size: 1024 - image: gpu + image: htcondor-secondary-gpu secondary_htcondor_cluster: true # Trainings From 958adb929253da418a7e844a1b80fbcd7978c529 Mon Sep 17 00:00:00 2001 From: Mira <86979912+mira-miracoli@users.noreply.github.com> Date: Tue, 19 Mar 2024 15:15:13 +0100 Subject: [PATCH 21/24] Update resources.yaml Testing an image that includes local changes to the usegalaxy_eu.cuda role: drivers-nvidia:latest-dkms module is installed after the cuda package. --- resources.yaml | 11 +---------- 1 file changed, 1 insertion(+), 10 deletions(-) diff --git a/resources.yaml b/resources.yaml index dbd6acb..b3cc738 100644 --- a/resources.yaml +++ b/resources.yaml @@ -2,7 +2,7 @@ # Global configuration of computing nodes. images: default: vggp-v60-j322-692e75a7c101-main - gpu: vgcn~rockylinux-9-latest-x86_64~+generic+workers-gpu+internal~20240314~56675~dev~8d452de~2nd_test_no_kernel_lt_by_mira + gpu: vgcn~rockylinux-9-latest-x86_64~+generic+workers-gpu+internal~20240318~65722~dev~220eac2~with_latest_drivers secure: vggp-v60-secure-j322-692e75a7c101-main htcondor-secondary: vgcn~workers+internal~rockylinux-8.6-x86_64~2023-10-26~43739~htcondor-secondary~ebb20b8~kysrpex_local_build htcondor-secondary-gpu: vgcn~workers-gpu+internal~rockylinux-8.6-x86_64~2023-11-16~34096~htcondor-secondary~a23fbb0~kysrpex_local_build @@ -333,12 +333,3 @@ deployment: group: training-joca-epigenomics-24 image: htcondor-secondary secondary_htcondor_cluster: true - - training-test-rocky-9: - count: 1 - flavor: c1.c28m225d50 - start: 2024-03-13 - end: 2024-03-18 - group: training-rocky9-test - image: rocky-9 - secondary_htcondor_cluster: true From ff1d7a7ab5921f64df3c70d32ac1a7bda1a674e5 Mon Sep 17 00:00:00 2001 From: Mira Kuntz Date: Thu, 21 Mar 2024 16:34:17 +0100 Subject: [PATCH 22/24] use the latest rocky 9 as default and new test training --- resources.yaml | 10 ++++++++-- 1 file changed, 8 insertions(+), 2 deletions(-) diff --git a/resources.yaml b/resources.yaml index 0a5eba5..eb26c55 100644 --- a/resources.yaml +++ b/resources.yaml @@ -1,12 +1,11 @@ --- # Global configuration of computing nodes. images: - default: vggp-v60-j322-692e75a7c101-main + default: vgcn~rockylinux-9-latest-x86_64~+generic+workers+internal~20240321~41538~HEAD~4766217 gpu: vgcn~rockylinux-9-latest-x86_64~+generic+workers-gpu+internal~20240318~65722~dev~220eac2~with_latest_drivers secure: vggp-v60-secure-j322-692e75a7c101-main htcondor-secondary: vgcn~workers+internal~rockylinux-8.6-x86_64~2023-10-26~43739~htcondor-secondary~ebb20b8~kysrpex_local_build htcondor-secondary-gpu: vgcn~workers-gpu+internal~rockylinux-8.6-x86_64~2023-11-16~34096~htcondor-secondary~a23fbb0~kysrpex_local_build - rocky-9: vgcn~rockylinux-9-latest-x86_64~+generic+workers+internal~20240314~40429~dev~9f80854~2nd_test_no_kernel_lt_by_mira network: bioinf secgroups: - ufr-ingress @@ -299,3 +298,10 @@ deployment: group: training-joca-epigenomics-24 image: htcondor-secondary secondary_htcondor_cluster: true + training-rock: + count: 1 + flavor: c1.c28m225d50 + start: 2024-04-09 + end: 2024-03-22 + group: training-rocky9-test + secondary_htcondor_cluster: true From d5185bbb0862b4483edb11f3f315c0ceaa871068 Mon Sep 17 00:00:00 2001 From: Mira Kuntz Date: Thu, 21 Mar 2024 16:49:24 +0100 Subject: [PATCH 23/24] until tuesday --- resources.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/resources.yaml b/resources.yaml index eb26c55..e5adaf2 100644 --- a/resources.yaml +++ b/resources.yaml @@ -301,7 +301,7 @@ deployment: training-rock: count: 1 flavor: c1.c28m225d50 - start: 2024-04-09 - end: 2024-03-22 + start: 2024-03-21 + end: 2024-03-26 group: training-rocky9-test secondary_htcondor_cluster: true From ae3390327ef4a1a5c8c0725562afea9ca818ef6b Mon Sep 17 00:00:00 2001 From: Mira Kuntz Date: Thu, 21 Mar 2024 17:05:41 +0100 Subject: [PATCH 24/24] change distribution --- resources.yaml | 16 ++++++++-------- 1 file changed, 8 insertions(+), 8 deletions(-) diff --git a/resources.yaml b/resources.yaml index e5adaf2..d2c6327 100644 --- a/resources.yaml +++ b/resources.yaml @@ -257,7 +257,7 @@ deployment: image: htcondor-secondary secondary_htcondor_cluster: true training-asse: - count: 4 + count: 3 flavor: c1.c28m225d50 start: 2024-03-18 end: 2024-03-22 @@ -272,6 +272,13 @@ deployment: group: training-gmc image: htcondor-secondary secondary_htcondor_cluster: true + training-rock: + count: 1 + flavor: c1.c28m225d50 + start: 2024-03-21 + end: 2024-03-26 + group: training-rocky9-test + secondary_htcondor_cluster: true training-geno: count: 2 @@ -298,10 +305,3 @@ deployment: group: training-joca-epigenomics-24 image: htcondor-secondary secondary_htcondor_cluster: true - training-rock: - count: 1 - flavor: c1.c28m225d50 - start: 2024-03-21 - end: 2024-03-26 - group: training-rocky9-test - secondary_htcondor_cluster: true