From 05625a7837a1f84af6fe8e9090d218ac16426197 Mon Sep 17 00:00:00 2001 From: "UseGalaxy.EU Jenkins Bot" Date: Sun, 7 Apr 2024 18:33:05 +0200 Subject: [PATCH] Autoupdate tool blog post --- _posts/2024-04-07-tool-update.md | 64 ++++++++++++++++++++++++++++++++ 1 file changed, 64 insertions(+) create mode 100644 _posts/2024-04-07-tool-update.md diff --git a/_posts/2024-04-07-tool-update.md b/_posts/2024-04-07-tool-update.md new file mode 100644 index 000000000..ce5ddebaa --- /dev/null +++ b/_posts/2024-04-07-tool-update.md @@ -0,0 +1,64 @@ +--- +site: freiburg +tags: [tools] +title: UseGalaxy.eu Tool Updates for 2024-04-07 +supporters: +- denbi +- elixir +--- + +On 2024-04-07, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in [Jenkins Build #439](https://build.galaxyproject.eu/job/usegalaxy-eu/job/install-tools/#439/) + + +## QIIME 2 + +- qiime2__deblur__denoise_16S was updated to [2572fc0f88f2](https://toolshed.g2.bx.psu.edu/view/q2d2/qiime2__deblur__denoise_16S/2572fc0f88f2) +- qiime2__deblur__denoise_16S was updated to [b883cbea5623](https://toolshed.g2.bx.psu.edu/view/q2d2/qiime2__deblur__denoise_16S/b883cbea5623) + +## Get Data + +- sra_tools was updated to [ba931a59dd59](https://toolshed.g2.bx.psu.edu/view/iuc/sra_tools/ba931a59dd59) + +## RNA Analysis + +- dexseq was updated to [9a7c5b6d8f1e](https://toolshed.g2.bx.psu.edu/view/iuc/dexseq/9a7c5b6d8f1e) + +## Assembly + +- hapog was updated to [5287036a797a](https://toolshed.g2.bx.psu.edu/view/iuc/hapog/5287036a797a) +- pairtools_dedup was updated to [ae537f4d4b93](https://toolshed.g2.bx.psu.edu/view/iuc/pairtools_dedup/ae537f4d4b93) +- pairtools_parse was updated to [a98caf2d8309](https://toolshed.g2.bx.psu.edu/view/iuc/pairtools_parse/a98caf2d8309) +- pairtools_sort was updated to [d392cfd963f4](https://toolshed.g2.bx.psu.edu/view/iuc/pairtools_sort/d392cfd963f4) +- pairtools_split was updated to [2c87e49a6407](https://toolshed.g2.bx.psu.edu/view/iuc/pairtools_split/2c87e49a6407) +- pairtools_stats was updated to [3c87fa1a3b50](https://toolshed.g2.bx.psu.edu/view/iuc/pairtools_stats/3c87fa1a3b50) +- trycycler_cluster was updated to [ed2425b9fd27](https://toolshed.g2.bx.psu.edu/view/iuc/trycycler_cluster/ed2425b9fd27) +- trycycler_consensus was updated to [f31d376ce725](https://toolshed.g2.bx.psu.edu/view/iuc/trycycler_consensus/f31d376ce725) +- trycycler_partition was updated to [af40e971a8cc](https://toolshed.g2.bx.psu.edu/view/iuc/trycycler_partition/af40e971a8cc) +- trycycler_reconcile_msa was updated to [bb11fefb23a3](https://toolshed.g2.bx.psu.edu/view/iuc/trycycler_reconcile_msa/bb11fefb23a3) +- trycycler_subsample was updated to [6bfab4a4a988](https://toolshed.g2.bx.psu.edu/view/iuc/trycycler_subsample/6bfab4a4a988) + +## Mapping + +- minimap2 was updated to [5cc34c3f440d](https://toolshed.g2.bx.psu.edu/view/iuc/minimap2/5cc34c3f440d) + +## Phylogenetics + +- hybpiper was updated to [48836bd31536](https://toolshed.g2.bx.psu.edu/view/iuc/hybpiper/48836bd31536) +- hyphy_prime was updated to [4072360120e4](https://toolshed.g2.bx.psu.edu/view/iuc/hyphy_prime/4072360120e4) + +## Variant Calling + +- sansa_annotate was updated to [584c09b1967a](https://toolshed.g2.bx.psu.edu/view/iuc/sansa_annotate/584c09b1967a) + +## Virology + +- varvamp was updated to [80e18c0836e5](https://toolshed.g2.bx.psu.edu/view/iuc/varvamp/80e18c0836e5) + +## None + +- data_manager_diamond_database_builder was updated to [4a08b7b76b78](https://toolshed.g2.bx.psu.edu/view/iuc/data_manager_diamond_database_builder/4a08b7b76b78) + +## Metabolomics + +- tracegroomer was updated to [3cb0128a59a6](https://toolshed.g2.bx.psu.edu/view/iuc/tracegroomer/3cb0128a59a6) +