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tasks.py
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tasks.py
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"""Convenience classes to reduce boilerplate and automatically load/save from cache."""
import os
from inspect import getfullargspec
from keyword import iskeyword
import cache
import paths
def _ensure_varname_list(value, name):
def assert_valid_varname(varname):
assert varname.isidentifier() and not iskeyword(
varname
), f"'{varname}' is not a valid variable name"
if value is None:
return []
if isinstance(value, str):
assert_valid_varname(value)
return [value]
assert isinstance(value, list), f"'{name}' must be a string or list of strings"
for varname in value:
assert_valid_varname(varname)
return value
class Task:
tex_files = []
def __init__(self, function, savepath=None):
self.function = function
self.cache_loads = getfullargspec(self.function).kwonlyargs
if "savepath" in self.cache_loads:
self.cache_loads.remove("savepath")
if "example_plots" in self.cache_loads:
self.cache_loads.remove("example_plots")
self.savepath = savepath
assert self.savepath is None or isinstance(
self.savepath, (tuple, dict)
), f"'savepath' must be a tuple or dict (got {type(savepath).__name__}"
self.create_doit_tasks.__func__.__doc__ = function.__doc__
def create_doit_tasks(self):
raise NotImplementedError("Subclasses must implement")
def _format_savepath(self, mkdir=False, **fmt_args):
def tuple_to_path(args):
if "info" in fmt_args:
assert "group_name" not in fmt_args
args = ("ind-{info.session_id}",) + args
if "group_name" in fmt_args:
assert "info" not in fmt_args
args = ("grp-{group_name}",) + args
path = paths.plot_file(*(arg.format(**fmt_args) for arg in args))
if mkdir:
os.makedirs(os.path.dirname(path), exist_ok=True)
return path
def is_tex_file(path):
return path.endswith(".tex") and not mkdir
if isinstance(self.savepath, tuple):
savepath = tuple_to_path(self.savepath)
if is_tex_file(savepath):
Task.tex_files.append(savepath)
return savepath
if isinstance(self.savepath, dict):
savepaths = {k: tuple_to_path(v) for k, v in self.savepath.items()}
for savepath in savepaths.values():
if is_tex_file(savepath):
Task.tex_files.append(savepath)
return savepaths
assert self.savepath is None, "'savepath' must be None, tuple or {str: tuple}"
class ExamplePlots:
def __init__(self, argnames, savepath, plots):
self.argnames = argnames
self._savepath = savepath
self.plots = plots
def savepath(self, info, *args, mkdir=True):
fmt_args = dict(zip(self.argnames, args))
savepath = paths.plot_file(
*(arg.format(info=info, **fmt_args) for arg in self._savepath)
)
if mkdir:
os.makedirs(os.path.dirname(savepath), exist_ok=True)
return savepath
def zip(self, info, mkdir=True):
for args in self.plots.get(info.session_id, []):
yield args + tuple([self.savepath(info, *args, mkdir=mkdir)])
class InfoTask(Task):
def __init__(
self,
function,
infos,
cache_saves=None,
read_example_plots=None,
write_example_plots=None,
savepath=None,
):
assert isinstance(infos, list)
assert len(infos) > 0
self.infos = infos
self.cache_saves = _ensure_varname_list(cache_saves, "cache_saves")
self.read_example_plots = _ensure_varname_list(
read_example_plots, "read_example_plots"
)
self.write_example_plots = _ensure_varname_list(
write_example_plots, "write_example_plots"
)
super().__init__(function=function, savepath=savepath)
def __call__(self, info, **kwargs):
loaded = {
key: cache.load(f"ind-{info.session_id}", key)
for key in self.cache_loads
if key not in kwargs
}
kwargs.update(loaded)
if self.savepath is not None and "savepath" not in kwargs:
kwargs["savepath"] = self._format_savepath(info=info, mkdir=True)
ex_plots = self.read_example_plots + self.write_example_plots
if len(ex_plots) > 0:
kwargs["example_plots"] = {key: example_plots[key] for key in ex_plots}
retval = self.function(info, **kwargs)
if len(self.cache_saves) == 0:
assert retval is None
elif len(self.cache_saves) == 1:
cache.save(f"ind-{info.session_id}", self.cache_saves[0], retval)
else:
assert isinstance(retval, dict)
for key in self.cache_saves:
cache.save(f"ind-{info.session_id}", key, retval[key])
def _file_dep(self, info):
file_dep = [info.path]
file_dep.extend(
paths.cached_file(f"ind-{info.session_id}", key=key)
for key in self.cache_loads
)
for key in self.read_example_plots:
file_dep.extend(
zipped[-1] for zipped in example_plots[key].zip(info, mkdir=False)
)
return file_dep
def _targets(self, info):
targets = []
if isinstance(self.savepath, tuple):
targets.append(self._format_savepath(info=info))
elif isinstance(self.savepath, dict):
targets.extend(self._format_savepath(info=info).values())
targets.extend(
paths.cached_file(f"ind-{info.session_id}", key=key)
for key in self.cache_saves
)
for key in self.write_example_plots:
targets.extend(
zipped[-1] for zipped in example_plots[key].zip(info, mkdir=False)
)
return targets
def create_doit_tasks(self):
for info in self.infos:
yield {
"basename": self.function.__name__,
"name": info.session_id,
"actions": [(self.__call__, [info])],
"file_dep": self._file_dep(info),
"targets": self._targets(info),
}
class GroupTask(Task):
def __init__(
self,
function,
groups,
cache_saves=None,
savepath=None,
):
assert isinstance(groups, dict)
assert len(groups) > 0
self.groups = groups
self.cache_saves = _ensure_varname_list(cache_saves, "cache_saves")
super().__init__(function=function, savepath=savepath)
def __call__(self, infos, group_name, **kwargs):
loaded = {
key: (
[
cache.load(f"ind-{info.session_id}", key[len("all_") :])
for info in infos
]
if key.startswith("all_")
else cache.load(f"grp-{group_name}", key)
)
for key in self.cache_loads
if key not in kwargs
}
kwargs.update(loaded)
if self.savepath is not None and "savepath" not in kwargs:
kwargs["savepath"] = self._format_savepath(
infos=infos, group_name=group_name, mkdir=True
)
retval = self.function(infos, group_name, **kwargs)
if len(self.cache_saves) == 0:
assert retval is None
elif len(self.cache_saves) == 1:
cache.save(f"grp-{group_name}", self.cache_saves[0], retval)
else:
assert isinstance(retval, dict)
for key in self.cache_saves:
cache.save(f"grp-{group_name}", key, retval[key])
def _file_dep(self, infos, group_name):
file_dep = []
if any(key.startswith("all_") for key in self.cache_loads):
for info in infos:
file_dep.append(info.path)
for key in self.cache_loads:
if key.startswith("all_"):
file_dep.extend(
paths.cached_file(f"ind-{info.session_id}", key=key[len("all_") :])
for info in infos
)
else:
file_dep.append(paths.cached_file(f"grp-{group_name}", key=key))
return file_dep
def _targets(self, infos, group_name):
targets = []
if isinstance(self.savepath, tuple):
targets.append(self._format_savepath(infos=infos, group_name=group_name))
elif isinstance(self.savepath, dict):
targets.extend(
self._format_savepath(infos=infos, group_name=group_name).values()
)
targets.extend(
paths.cached_file(f"grp-{group_name}", key=key) for key in self.cache_saves
)
return targets
def create_doit_tasks(self):
for group_name, infos in self.groups.items():
yield {
"basename": self.function.__name__,
"name": group_name,
"actions": [(self.__call__, [infos, group_name])],
"file_dep": self._file_dep(infos, group_name),
"targets": self._targets(infos, group_name),
}
class FigureTask(Task):
figure_files = [] # All the savepaths for these tasks
def __init__(self, function, panels, copy_to, savepath):
assert savepath is not None
self.panels = {
key: paths.plot_file(*pathargs) for key, pathargs in panels.items()
}
self.copy_to = copy_to
super().__init__(function, savepath)
def __call__(self, **kwargs):
if self.savepath is not None and "savepath" not in kwargs:
kwargs["savepath"] = self._format_savepath(mkdir=True)
self.function(panels=self.panels, **kwargs)
def create_doit_tasks(self):
target = self._format_savepath()
assert isinstance(target, str)
FigureTask.figure_files.append(
(
target,
paths.thesis_image(self.copy_to),
paths.thesis_image(f"{self.copy_to[:-4]}.png"),
)
)
return {
"basename": self.function.__name__,
"actions": [(self.__call__, [])],
"file_dep": list(self.panels.values()),
"targets": [target],
}
def task(
*,
infos=None,
groups=None,
read_example_plots=None,
write_example_plots=None,
panels=None,
cache_saves=None,
savepath=None,
copy_to=None,
):
def decorator(function):
if infos is not None:
assert groups is None and panels is None and copy_to is None
elif groups is not None:
assert infos is None and panels is None and copy_to is None
assert read_example_plots is None
assert write_example_plots is None
elif panels is not None:
assert infos is None and groups is None and copy_to is not None
assert copy_to.endswith(".pdf")
assert read_example_plots is None
assert write_example_plots is None
else:
assert False
if infos is not None:
return InfoTask(
function,
infos,
cache_saves=cache_saves,
read_example_plots=read_example_plots,
write_example_plots=write_example_plots,
savepath=savepath,
)
elif groups is not None:
return GroupTask(
function, groups, cache_saves=cache_saves, savepath=savepath
)
return FigureTask(function, panels, copy_to, savepath=savepath)
return decorator
example_plots = {
"matched_run_raster": ExamplePlots(
argnames=["trajectory", "i"],
savepath=(
"ind-{info.session_id}",
"ind-matched-run-rasters",
"matched_run_rasters_{trajectory}_{i}.svg",
),
plots={},
),
"run_raster": ExamplePlots(
argnames=["trajectory", "i"],
savepath=(
"ind-{info.session_id}",
"ind-run-rasters",
"run_raster_{trajectory}_{i}.svg",
),
plots={},
),
"swrs": ExamplePlots(
argnames=["trajectory", "i", "task_time", "type"],
savepath=(
"ind-{info.session_id}",
"ind-{type}",
"{info.session_id}-swr-{trajectory}-{i}-{task_time}.svg",
),
plots={
"R063d7": [
("full_shortcut", 153, "pauseA", "replays"),
("full_shortcut", 980, "phase3", "replays"),
("u", 113, "pauseA", "replays"),
],
"R066d5": [
("u", 339, "pauseB", "replays"),
("full_shortcut", 195, "pauseB", "replays"),
],
"R067d1": [
("full_shortcut", 486, "phase3", "replays"),
("full_shortcut", 508, "phase3", "replays"),
("full_shortcut", 539, "phase3", "replays"),
],
"R068d8": [("u", 601, "phase3", "replays")],
},
),
"swrs_without_tc": ExamplePlots(
argnames=["trajectory", "i", "task_time", "type"],
savepath=(
"ind-{info.session_id}",
"ind-{type}",
"{info.session_id}-swr-{trajectory}-{i}-{task_time}-without-tc.svg",
),
plots={
"R063d3": [
("full_shortcut", 734, "phase3", "replays-without-tc"), # decent
],
"R063d5": [
("full_shortcut", 572, "pauseB", "replays-without-tc"), # decent
("full_shortcut", 705, "phase3", "replays-without-tc"), # decent
],
"R063d6": [
("full_shortcut", 180, "phase3", "replays-without-tc"), # decent
],
"R063d7": [
("u", 686, "pauseB", "replays-without-tc"),
("u", 87, "pauseA", "replays-without-tc"),
],
"R063d8": [
("full_shortcut", 589, "phase3", "replays-without-tc"),
("full_shortcut", 1110, "phase3", "replays-without-tc"),
("full_shortcut", 1182, "phase3", "replays-without-tc"),
],
"R066d1": [
("full_shortcut", 183, "phase2", "replays-without-tc"),
],
"R066d2": [
("full_shortcut", 329, "phase3", "replays-without-tc"),
("full_shortcut", 355, "phase3", "replays-without-tc"), # decent
("full_shortcut", 418, "phase3", "replays-without-tc"), # decent
],
"R066d5": [
("u", 339, "pauseB", "replays-without-tc"),
("full_shortcut", 195, "pauseB", "replays-without-tc"),
("full_shortcut", 584, "phase3", "replays-without-tc"),
],
"R067d1": [
("full_shortcut", 539, "phase3", "replays-without-tc"),
],
"R068d1": [
("full_shortcut", 450, "pauseB", "replays-without-tc"),
("full_shortcut", 760, "pauseB", "replays-without-tc"), # decent
("full_shortcut", 940, "phase3", "replays-without-tc"), # decent
("full_shortcut", 1024, "phase3", "replays-without-tc"),
],
"R068d8": [
("u", 601, "phase3", "replays-without-tc"),
("full_shortcut", 380, "pauseB", "replays-without-tc"),
],
},
),
}