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Provide SCV assertions in "minimal clinvar" output #240

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holtgrewe opened this issue Jun 28, 2024 · 0 comments · Fixed by #258
Closed

Provide SCV assertions in "minimal clinvar" output #240

holtgrewe opened this issue Jun 28, 2024 · 0 comments · Fixed by #258
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enhancement New feature or request

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@holtgrewe
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Is your feature request related to a problem? Please describe.
We currently only write out RCV records and not the contained SCV records in the "minimal" information. We must keep at least the assertions.

Describe the solution you'd like
Keep the pathogenicity descriptions but trim everything else.

Describe alternatives you've considered
N/A

Additional context
N/A
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feat: extract-vars writes thinned-out SCV infos (#240) varfish-org/clinvar-this
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@holtgrewe