DESCRIPTION

Package: bugSigSimple
Version: 0.99.5
Date: 2022-03-07
Title: Simple exploratory analysis of curated microbe signatures 
Authors@R: c(person("Ludwig", "Geistlinger", email = "Ludwig_Geistlinger@hms.harvard.edu", role = c("aut", "cre")),
    person("Chloe", "Mirzayi", email = "chloe.mirzayi@sph.cuny.edu", role = c("aut")),
    person("Fatima", "Zohra", email = "Fatima.Zohra85@sphmail.cuny.edu", role = "aut"),
    person("Levi", "Waldron", email = "lwaldron.research@gmail.com", role = "aut"))
Maintainer: Ludwig Geistlinger <ludwig.geistlinger@sph.cuny.edu>
Depends: R(>= 4.1.0)
Imports: 
    curatedMetagenomicData,
    mia,
    bugsigdbr,
    BugSigDBStats,
    ggpubr,
    safe,
    ComplexHeatmap,
    InteractiveComplexHeatmap,
    Hotelling,
    pscl,
    MASS,
    DT,
    tidyverse,
    dplyr,
    tidyr,
    purrr,
    stringr,
    ggplot2,
    kableExtra
Suggests: 
    BiocStyle, 
    knitr,
    rmarkdown
Remotes:
    waldronlab/BugSigDBStats,
    waldronlab/bugsigdbr
Description: bugSigSimple provides simple exploratory analysis of curated microbe signatures from bugsigdb.org.
License: Artistic-2.0
VignetteBuilder: knitr
RoxygenNote: 7.1.2
URL: https://waldronlab.io/bugSigSimple