-
Notifications
You must be signed in to change notification settings - Fork 22
/
Copy pathethan_google_scholar.bib
1219 lines (1093 loc) · 43.2 KB
/
ethan_google_scholar.bib
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
@article{mcgill2007species,
title={Species abundance distributions: moving beyond single prediction theories to integration within an ecological framework},
author={McGill, Brian J and Etienne, Rampal S and Gray, John S and Alonso, David and Anderson, Marti J and Benecha, Habtamu Kassa and Dornelas, Maria and Enquist, Brian J and Green, Jessica L and He, Fangliang and others},
journal={Ecology letters},
volume={10},
number={10},
pages={995--1015},
year={2007},
publisher={Blackwell Publishing Ltd Oxford, UK}
}
@article{white2007relationships,
title={Relationships between body size and abundance in ecology},
author={White, Ethan P and Ernest, SK Morgan and Kerkhoff, Andrew J and Enquist, Brian J},
journal={Trends in ecology \& evolution},
volume={22},
number={6},
pages={323--330},
year={2007},
publisher={Elsevier}
}
@article{ernest2003thermodynamic,
title={Thermodynamic and metabolic effects on the scaling of production and population energy use},
author={Ernest, SK Morgan and Enquist, Brian J and Brown, James H and Charnov, Eric L and Gillooly, James F and Savage, Van M and White, Ethan P and Smith, Felisa A and Hadly, Elizabeth A and Haskell, John P and others},
journal={Ecology Letters},
volume={6},
number={11},
pages={990--995},
year={2003},
publisher={Blackwell Science Ltd Oxford, UK}
}
@article{adler2005evidence,
title={Evidence for a general species--time--area relationship},
author={Adler, Peter B and White, Ethan P and Lauenroth, William K and Kaufman, Dawn M and Rassweiler, Andrew and Rusak, James A},
journal={Ecology},
volume={86},
number={8},
pages={2032--2039},
year={2005},
publisher={Ecological Society of America}
}
@article{hurlbert2005disparity,
title={Disparity between range map-and survey-based analyses of species richness: patterns, processes and implications},
author={Hurlbert, Allen H and White, Ethan P},
journal={Ecology Letters},
volume={8},
number={3},
pages={319--327},
year={2005},
publisher={Blackwell Science Ltd Oxford, UK}
}
@article{white2008estimating,
title={On estimating the exponent of power-law frequency distributions},
author={White, Ethan P and Enquist, Brian J and Green, Jessica L},
journal={Ecology},
volume={89},
number={4},
pages={905--912},
year={2008},
publisher={Ecological Society of America}
}
@article{white2004two,
title={Two-phase species--time relationships in North American land birds},
author={White, Ethan P},
journal={Ecology Letters},
volume={7},
number={4},
pages={329--336},
year={2004},
publisher={Blackwell Science Ltd Oxford, UK}
}
@article{thibault2004temporal,
title={Temporal dynamics in the structure and composition of a desert rodent community},
author={Thibault, Katherine M and White, Ethan P and Ernest, SK Morgan},
journal={Ecology},
volume={85},
number={10},
pages={2649--2655},
year={2004},
publisher={Ecological Society of America}
}
@article{allen2003effects,
title={Effects of range size on species--area relationships},
author={Allen, Andrew P and White, Ethan P},
journal={Evolutionary Ecology Research},
volume={5},
number={4},
pages={493--499},
year={2003},
publisher={Evolutionary Ecology, Ltd.}
}
@article{sax2005dynamics,
title={Dynamics of species invasions: Insights into the mechanisms that limit species diversity},
author={Sax, Dov F and Brown, James H and White, Ethan P and Gaines, Steven D},
year={2005},
publisher={Sinauer Associates}
}
@article{ernest2008zero,
title={Zero sum, the niche, and metacommunities: long-term dynamics of community assembly},
author={Ernest, SK Morgan and Brown, James H and Thibault, Katherine M and White, Ethan P and Goheen, Jacob R},
journal={The American Naturalist},
volume={172},
number={6},
pages={E257--E269},
year={2008},
publisher={The University of Chicago Press}
}
@article{mcclain2007challenges,
title={Challenges in the application of geometric constraint models},
author={McClain, Craig R and White, Ethan P and Hurlbert, Allen H},
journal={Global Ecology and Biogeography},
volume={16},
number={3},
pages={257--264},
year={2007},
publisher={Blackwell Publishing Ltd Oxford, UK}
}
@article{white2004trade,
title={Trade-offs in community properties through time in a desert rodent community},
author={White, Ethan P and Ernest, SK Morgan and Thibault, Katherine M},
journal={The American Naturalist},
volume={164},
number={5},
pages={670--676},
year={2004},
publisher={The University of Chicago Press}
}
@article{hurlbert2007ecological,
title={Ecological correlates of geographical range occupancy in North American birds},
author={Hurlbert, Allen H and White, Ethan P},
journal={Global Ecology and Biogeography},
volume={16},
number={6},
pages={764--773},
year={2007},
publisher={Blackwell Publishing Ltd Oxford, UK}
}
@article{white2001effects,
title={Effects of recording media on echolocation data from broadband bat detectors},
author={White, Ethan P and Gehrt, Stanley D},
journal={Wildlife Society Bulletin},
pages={974--978},
year={2001},
publisher={The Wildlife Society}
}
@article{goheen2005intra,
title={Intra-guild compensation regulates species richness in desert rodents},
author={Goheen, Jacob R and White, Ethan P and Ernest, SK Morgan and Brown, James H},
journal={Ecology},
volume={86},
number={3},
pages={567--573},
year={2005},
publisher={Ecological Society of America}
}
@article{savage2006comment,
title={Comment on" The illusion of invariant quantities in life histories"},
author={Savage, Van M and White, Ethan P and Moses, Melanie E and Ernest, SK Morgan and Enquist, Brian J and Charnov, Eric L},
journal={Science},
volume={312},
number={5771},
pages={198--198},
year={2006},
publisher={American Association for the Advancement of Science}
}
@article{white2007spatiotemporal,
title={Spatiotemporal scaling of species richness: patterns, processes andimplications},
author={White, Ethan P},
journal={ScalingBiodiversity},
pages={325},
year={2007},
publisher={Cambridge University Press}
}
@article{kathleen2004hyperdisease,
title={Was a ‘hyperdisease’responsible for the late Pleistocene megafaunal extinction?},
author={Kathleen Lyons, S and Smith, Felisa A and Wagner, Peter J and White, Ethan P and Brown, James H},
journal={Ecology Letters},
volume={7},
number={9},
pages={859--868},
year={2004},
publisher={Blackwell Science Ltd Oxford, UK}
}
@article{morlon2009taking,
title={Taking species abundance distributions beyond individuals},
author={Morlon, H{\'e}l{\`e}ne and White, Ethan P and Etienne, Rampal S and Green, Jessica L and Ostling, Annette and Alonso, David and Enquist, Brian J and He, Fangliang and Hurlbert, Allen and Magurran, Anne E and others},
journal={Ecology Letters},
volume={12},
number={6},
pages={488--501},
year={2009},
publisher={Blackwell Publishing Ltd Oxford, UK}
}
@article{price2009evaluating,
title={Evaluating scaling models in biology using hierarchical Bayesian approaches},
author={Price, Charles A and Ogle, Kiona and White, Ethan P and Weitz, Joshua S},
journal={Ecology letters},
volume={12},
number={7},
pages={641--651},
year={2009},
publisher={Blackwell Publishing Ltd Oxford, UK}
}
@article{stegen2008relationship,
title={On the relationship between mass and diameter distributions in tree communities},
author={Stegen, James C and White, Ethan P},
journal={Ecology Letters},
volume={11},
number={12},
pages={1287--1293},
year={2008},
publisher={Blackwell Publishing Ltd Oxford, UK}
}
@article{white2010combined,
title={The combined influence of the local environment and regional enrichment on bird species richness},
author={White, Ethan P and Hurlbert, Allen H},
journal={The American Naturalist},
volume={175},
number={2},
pages={E35--E43},
year={2010},
publisher={The University of Chicago Press}
}
@incollection{white2005template,
title={The template: patterns and processes of spatial variation},
author={White, Ethan P and Brown, James H},
booktitle={Ecosystem function in heterogeneous landscapes},
pages={31--47},
year={2005},
publisher={Springer New York New York, NY}
}
@article{white2007effects,
title={Effects of population-level aggregation, autocorrelation, and interspecific association on the species--time relationship in two desert communities},
author={White, Ethan P and Gilchrist, Michael A},
journal={Evolutionary Ecology Research},
volume={9},
number={8},
pages={1329--1347},
year={2007},
publisher={Evolutionary Ecology, Ltd.}
}
@article{white2010integrating,
title={Integrating spatial and temporal approaches to understanding species richness},
author={White, Ethan P and Ernest, SK Morgan and Adler, Peter B and Hurlbert, Allen H and Lyons, S Kathleen},
journal={Philosophical Transactions of the Royal Society B: Biological Sciences},
volume={365},
number={1558},
pages={3633--3643},
year={2010},
publisher={The Royal Society}
}
@article{goheen2006intra,
title={Intra-guild compensation regulates species richness in desert rodents: reply},
author={Goheen, Jacob R and White, Ethan P and Ernest, SK Morgan and Brown, James H},
journal={Ecology},
volume={87},
number={8},
pages={2121--2125},
year={2006},
publisher={Ecological Society of America}
}
@article{thibault2010long,
title={Long-term insights into the influence of precipitation on community dynamics in desert rodents},
author={Thibault, Katherine M and Ernest, SK Morgan and White, Ethan P and Brown, James H and Goheen, Jacob R},
journal={Journal of Mammalogy},
volume={91},
number={4},
pages={787--797},
year={2010},
publisher={American Society of Mammalogists Illinois Natural History Survey, 1816 South~…}
}
@article{thibault2011multimodality,
title={Multimodality in the individual size distributions of bird communities},
author={Thibault, Katherine M and White, Ethan P and Hurlbert, Allen H and Ernest, SK Morgan},
journal={Global Ecology and Biogeography},
volume={20},
number={1},
pages={145--153},
year={2011},
publisher={Blackwell Publishing Ltd Oxford, UK}
}
@article{ernest2009changes,
title={Changes in a tropical forest support metabolic zero-sum dynamics},
author={Ernest, SK Morgan and White, Ethan P and Brown, James H},
journal={Ecology Letters},
volume={12},
number={6},
pages={507--515},
year={2009},
publisher={Blackwell Publishing Ltd Oxford, UK}
}
@article{supp2010measures,
title={Measures of journal quality should separate reviews from original research},
author={Supp, Sarah R and White, Ethan P},
journal={Ideas in Ecology and Evolution},
volume={3},
year={2010}
}
@article{stegen2011variation,
title={Variation in above-ground forest biomass across broad climatic gradients},
author={Stegen, James C and Swenson, Nathan G and Enquist, Brian J and White, Ethan P and Phillips, Oliver L and J{\o}rgensen, Peter M and Weiser, Michael D and Monteagudo Mendoza, Abel and N{\'u}{\~n}ez Vargas, Percy},
journal={Global Ecology and Biogeography},
volume={20},
number={5},
pages={744--754},
year={2011},
publisher={Blackwell Publishing Ltd Oxford, UK}
}
@article{xiao2011use,
title={On the use of log-transformation vs. nonlinear regression for analyzing biological power laws},
author={Xiao, Xiao and White, Ethan P and Hooten, Mevin B and Durham, Susan L},
journal={Ecology},
volume={92},
number={10},
pages={1887--1894},
year={2011},
publisher={Ecological Society of America}
}
@article{white2004factors,
title={Factors affecting bat house occupancy in Colorado},
author={White, Ethan P},
journal={The Southwestern Naturalist},
volume={49},
number={3},
pages={344--349},
year={2004},
publisher={Southwestern Association of Naturalists}
}
@article{locey2011simple,
title={Simple structural differences between coding and noncoding DNA},
author={Locey, Kenneth J and White, Ethan P},
journal={PLoS One},
volume={6},
number={2},
pages={e14651},
year={2011},
publisher={Public Library of Science San Francisco, USA}
}
@article{p2006comparison,
title={A comparison of the species--time relationship across ecosystems and taxonomic groups},
author={P White, Ethan and B Adler, Peter and K Lauenroth, William and A Gill, Richard and Greenberg, David and M Kaufman, Dawn and Rassweiler, Andrew and A Rusak, James and D Smith, Melinda and R Steinbeck, John and others},
journal={Oikos},
volume={112},
number={1},
pages={185--195},
year={2006},
publisher={Wiley Online Library}
}
@article{thibault2011species,
title={Species composition and abundance of mammalian communities},
author={Thibault, Katherine M and Supp, Sarah R and Giffin, Mikaelle and White, Ethan P and Ernest, SK Morgan},
journal={Ecology},
volume={92},
number={12},
pages={2316--2316},
year={2011},
publisher={Eco Soc America}
}
@article{white2012characterizing,
title={Characterizing species abundance distributions across taxa and ecosystems using a simple maximum entropy model},
author={White, Ethan P and Thibault, Katherine M and Xiao, Xiao},
journal={Ecology},
volume={93},
number={8},
pages={1772--1778},
year={2012},
publisher={Ecological Society of America}
}
@article{thibault2010complex,
title={Complex dynamics of rodent response to precipitation in the Chihuahuan Desert},
author={Thibault, KM and Ernest, SK and White, Ethan P and Brown, JH and Goheen, JR},
journal={Journal of Mammalogy},
volume={91},
pages={787},
year={2010},
publisher={American Society of Mammalogists}
}
@article{supp2012experimental,
title={An experimental test of the response of macroecological patterns to altered species interactions},
author={Supp, SR and Xiao, X and Ernest, SKM and White, EP},
journal={Ecology},
volume={93},
number={12},
pages={2505--2511},
year={2012},
publisher={Ecological Society of America}
}
@article{wilson2014best,
title={Best practices for scientific computing},
author={Wilson, Greg and Aruliah, Dhavide A and Brown, C Titus and Chue Hong, Neil P and Davis, Matt and Guy, Richard T and Haddock, Steven HD and Huff, Kathryn D and Mitchell, Ian M and Plumbley, Mark D and others},
journal={PLoS biology},
volume={12},
number={1},
pages={e1001745},
year={2014},
publisher={Public Library of Science San Francisco, USA}
}
@article{coyle2013opposing,
title={Opposing mechanisms drive richness patterns of core and transient bird species},
author={Coyle, Jessica R and Hurlbert, Allen H and White, Ethan P},
journal={The American Naturalist},
volume={181},
number={4},
pages={E83--E90},
year={2013},
publisher={University of Chicago Press Chicago, IL}
}
@article{white2013nine,
title={Nine simple ways to make it easier to (re) use your data},
author={White, Ethan P and Baldridge, Elita and Brym, Zachary T and Locey, Kenneth J and McGlinn, Daniel J and Supp, Sarah R},
journal={Ideas in Ecology and Evolution},
volume={6},
number={2},
year={2013}
}
@article{desjardins2013case,
title={The case for open preprints in biology},
author={Desjardins-Proulx, Philippe and White, Ethan P and Adamson, Joel J and Ram, Karthik and Poisot, Timoth{\'e}e and Gravel, Dominique},
journal={PLoS Biology},
volume={11},
number={5},
pages={e1001563},
year={2013},
publisher={Public Library of Science San Francisco, USA}
}
@article{morris2013ecodata,
title={The EcoData retriever: improving access to existing ecological data},
author={Morris, Benjamin D and White, Ethan P},
journal={PloS one},
volume={8},
number={6},
pages={e65848},
year={2013},
publisher={Public Library of Science}
}
@article{mcglinn2013empirical,
title={An empirical evaluation of four variants of a universal species--area relationship},
author={McGlinn, Daniel J and Xiao, Xiao and White, Ethan P},
journal={PeerJ},
volume={1},
pages={e212},
year={2013},
publisher={PeerJ Inc.}
}
@article{xiao2015strong,
title={A strong test of the maximum entropy theory of ecology},
author={Xiao, Xiao and McGlinn, Daniel J and White, Ethan P},
journal={The American Naturalist},
volume={185},
number={3},
pages={E70--E80},
year={2015},
publisher={University of Chicago Press Chicago, IL}
}
@article{locey2013species,
title={How species richness and total abundance constrain the distribution of abundance},
author={Locey, Kenneth J and White, Ethan P},
journal={Ecology letters},
volume={16},
number={9},
pages={1177--1185},
year={2013}
}
@article{mcglinn2015exploring,
title={Exploring the spatially explicit predictions of the Maximum Entropy Theory of Ecology},
author={McGlinn, DJ and Xiao, Xiao and Kitzes, Justin and White, Ethan P},
journal={Global Ecology and Biogeography},
volume={24},
number={6},
pages={675--684},
year={2015}
}
@article{ernest2014macroecology,
title={Macroecology before Macroecology},
author={Ernest, SK Morgan and White, Ethan P},
journal={Foundations of Macroecology: Classic Papers with Commentaries},
pages={13},
year={2014},
publisher={University of Chicago Press}
}
@article{xiao2015process,
title={A process-independent explanation for the general form of Taylor’s law},
author={Xiao, Xiao and Locey, Kenneth J and White, Ethan P},
journal={The American Naturalist},
volume={186},
number={2},
pages={E51--E60},
year={2015},
publisher={University of Chicago Press Chicago, IL}
}
@article{xiao2016comparing,
title={Comparing process-based and constraint-based approaches for modeling macroecological patterns},
author={Xiao, Xiao and O'Dwyer, James P and White, Ethan P},
journal={Ecology},
volume={97},
number={5},
pages={1228--1238},
year={2016}
}
@article{teal2015data,
title={Data carpentry: workshops to increase data literacy for researchers},
author={Teal, Tracy K and Cranston, Karen A and Lapp, Hilmar and White, Ethan and Wilson, Greg and Ram, Karthik and Pawlik, Aleksandra},
year={2015}
}
@article{white2015some,
title={Some thoughts on best publishing practices for scientific software},
author={White, Ethan P},
journal={Ideas in Ecology and Evolution},
volume={8},
number={1},
year={2015}
}
@article{baldridge2016extensive,
title={An extensive comparison of species-abundance distribution models},
author={Baldridge, Elita and Harris, David J and Xiao, Xiao and White, Ethan P},
journal={PeerJ},
volume={4},
pages={e2823},
year={2016},
publisher={PeerJ Inc.}
}
@article{mislan2016elevating,
title={Elevating the status of code in ecology},
author={Mislan, KAS and Heer, Jeffrey M and White, Ethan P},
journal={Trends in ecology \& evolution},
volume={31},
number={1},
pages={4--7},
year={2016},
publisher={Elsevier}
}
@article{tennant2023open,
title={Open Letter to The American Association for the Advancement of Science},
author={Tennant, Jonathan P and Poisot, Timoth{\'e}e and Kubke, M Fabiana and Michonneau, Fran{\c{c}}ois and Taylor, Michael P and Steel, Graham and Anquetin, J{\'e}r{\'e}my and Coyte, Emily and Schwessinger, Benjamin and McKiernan, Erin C and others},
journal={Authorea Preprints},
year={2023},
publisher={Authorea}
}
@article{riemer2018no,
title={No general relationship between mass and temperature in endothermic species},
author={Riemer, Kristina and Guralnick, Robert P and White, Ethan P},
journal={Elife},
volume={7},
pages={e27166},
year={2018},
publisher={eLife Sciences Publications, Ltd}
}
@article{hampton2017skills,
title={Skills and knowledge for data-intensive environmental research},
author={Hampton, Stephanie E and Jones, Matthew B and Wasser, Leah A and Schildhauer, Mark P and Supp, Sarah R and Brun, Julien and Hernandez, Rebecca R and Boettiger, Carl and Collins, Scott L and Gross, Louis J and others},
journal={BioScience},
volume={67},
number={6},
pages={546--557},
year={2017},
publisher={Oxford University Press}
}
@article{dietze2018iterative,
title={Iterative near-term ecological forecasting: Needs, opportunities, and challenges},
author={Dietze, Michael C and Fox, Andrew and Beck-Johnson, Lindsay M and Betancourt, Julio L and Hooten, Mevin B and Jarnevich, Catherine S and Keitt, Timothy H and Kenney, Melissa A and Laney, Christine M and Larsen, Laurel G and others},
journal={Proceedings of the National Academy of Sciences},
volume={115},
number={7},
pages={1424--1432},
year={2018},
publisher={National Academy of Sciences}
}
@article{white2016data,
title={Data Management Plan for Moore Investigator in Data Driven Discovery Grant},
author={White, Ethan},
journal={Research Ideas and Outcomes},
volume={2},
pages={e10708},
year={2016},
publisher={Pensoft Publishers}
}
@article{harris2018forecasting,
title={Forecasting biodiversity in breeding birds using best practices},
author={Harris, David J and Taylor, Shawn D and White, Ethan P},
journal={PeerJ},
volume={6},
pages={e4278},
year={2018},
publisher={PeerJ Inc.}
}
@article{white2019developing,
title={Developing an automated iterative near-term forecasting system for an ecological study},
author={White, Ethan P and Yenni, Glenda M and Taylor, Shawn D and Christensen, Erica M and Bledsoe, Ellen K and Simonis, Juniper L and Ernest, SK Morgan},
journal={Methods in Ecology and Evolution},
volume={10},
number={3},
pages={332--344},
year={2019}
}
@article{ernest2018portal,
title={The Portal Project: a long-term study of a Chihuahuan desert ecosystem},
author={Ernest, SK Morgan and Yenni, Glenda M and Allington, Ginger and Bledsoe, Ellen K and Christensen, Erica M and Diaz, Renata M and Geluso, Keith and Goheen, Jacob R and Guo, Qinfeng and Heske, Edward and others},
journal={BioRxiv},
pages={332783},
year={2018},
publisher={Cold Spring Harbor Laboratory}
}
@article{marconi2019data,
title={A data science challenge for converting airborne remote sensing data into ecological information},
author={Marconi, Sergio and Graves, Sarah J and Gong, Dihong and Nia, Morteza Shahriari and Le Bras, Marion and Dorr, Bonnie J and Fontana, Peter and Gearhart, Justin and Greenberg, Craig and Harris, Dave J and others},
journal={PeerJ},
volume={6},
pages={e5843},
year={2019},
publisher={PeerJ Inc.}
}
@article{taylor2019comparison,
title={Comparison of large-scale citizen science data and long-term study data for phenology modeling},
author={Taylor, Shawn D and Meiners, Joan M and Riemer, Kristina and Orr, Michael C and White, Ethan P},
journal={Ecology},
volume={100},
number={2},
pages={e02568},
year={2019}
}
@article{dornelas2018biotime,
title={BioTIME: A database of biodiversity time series for the Anthropocene},
author={Dornelas, Maria and Antao, Laura H and Moyes, Faye and Bates, Amanda E and Magurran, Anne E and Adam, Du{\v{s}}an and Akhmetzhanova, Asem A and Appeltans, Ward and Arcos, Jose Manuel and Arnold, Haley and others},
journal={Global Ecology and Biogeography},
volume={27},
number={7},
pages={760--786},
year={2018}
}
@article{jenkins2018proportion,
title={The proportion of core species in a community varies with spatial scale and environmental heterogeneity},
author={Jenkins, Molly F and White, Ethan P and Hurlbert, Allen H},
journal={PeerJ},
volume={6},
pages={e6019},
year={2018},
publisher={PeerJ Inc.}
}
@article{perkins2019energetic,
title={Energetic equivalence underpins the size structure of tree and phytoplankton communities},
author={Perkins, Daniel M and Perna, Andrea and Adrian, Rita and Cerme{\~n}o, Pedro and Gaedke, Ursula and Huete-Ortega, Maria and White, Ethan P and Yvon-Durocher, Gabriel},
journal={Nature communications},
volume={10},
number={1},
pages={255},
year={2019},
publisher={Nature Publishing Group UK London}
}
@article{weinstein2019individual,
title={Individual tree-crown detection in RGB imagery using semi-supervised deep learning neural networks},
author={Weinstein, Ben G and Marconi, Sergio and Bohlman, Stephanie and Zare, Alina and White, Ethan},
journal={Remote Sensing},
volume={11},
number={11},
pages={1309},
year={2019},
publisher={MDPI}
}
@article{yenni2019developing,
title={Developing a modern data workflow for regularly updated data},
author={Yenni, Glenda M and Christensen, Erica M and Bledsoe, Ellen K and Supp, Sarah R and Diaz, Renata M and White, Ethan P and Ernest, SK Morgan},
journal={PLoS Biology},
volume={17},
number={1},
pages={e3000125},
year={2019},
publisher={Public Library of Science San Francisco, CA USA}
}
@article{senyondo2017retriever,
title={Retriever: Data retrieval tool},
author={Senyondo, Henry and Morris, Benjamin D and Goel, Akash and Zhang, Andrew and Narasimha, Akshay and Negi, Shivam and Harris, David J and Gertrude Digges, D and Kumar, Kapil and Jain, Amritanshu and others},
journal={The Journal of Open Source Software},
volume={2},
number={19},
pages={451},
year={2017}
}
@article{christensen2019portalr,
title={portalr: an R package for summarizing and using the Portal Project Data},
author={Christensen, Erica M and Yenni, Glenda M and Ye, Hao and Simonis, Juniper L and Bledsoe, Ellen K and Diaz, Renata and Taylor, Shawn D and White, Ethan P and Ernest, SK Morgan},
journal={Journal of Open Source Software},
volume={4},
number={33},
pages={1098},
year={2019}
}
@article{marconi2021estimating,
title={Estimating individual-level plant traits at scale},
author={Marconi, Sergio and Graves, Sarah J and Weinstein, Ben G and Bohlman, Stephanie and White, Ethan P},
journal={Ecological Applications},
volume={31},
number={4},
pages={e02300},
year={2021}
}
@article{taylor2020automated,
title={Automated data-intensive forecasting of plant phenology throughout the United States},
author={Taylor, Shawn D and White, Ethan P},
journal={Ecological Applications},
volume={30},
number={1},
pages={e02025},
year={2020}
}
@article{norman2019hotspot,
title={Hotspot prioritizations show sensitivity to data type},
author={Norman, Kari EA and White, Ethan P},
journal={BioRxiv},
pages={685735},
year={2019},
publisher={Cold Spring Harbor Laboratory}
}
@misc{burgio2020ten,
title={Ten simple rules for a successful remote postdoc},
author={Burgio, Kevin R and MacKenzie, Caitlin McDonough and Borrelle, Stephanie B and Ernest, SK Morgan and Gill, Jacquelyn L and Ingeman, Kurt E and Teffer, Amy and White, Ethan P},
journal={PLoS Computational Biology},
volume={16},
number={5},
pages={e1007809},
year={2020},
publisher={Public Library of Science San Francisco, CA USA}
}
@article{weinstein2019geographic,
title={Geographic generalization in airborne RGB deep learning tree detection},
author={Weinstein, Ben G and Marconi, Sergio and Bohlman, Stephanie A and Zare, Alina and White, Ethan P},
journal={bioRxiv},
pages={790071},
year={2019},
publisher={Cold Spring Harbor Laboratory}
}
@article{choi2019measuring,
title={Measuring impact of climate change on tree species: analysis of jsdm on fia data},
author={Choi, Hyun and Sadeghian, Ali and Marconi, Sergio and White, Ethan and Wang, Daisy Zhe},
journal={arXiv preprint arXiv:1910.04932},
year={2019}
}
@article{adler2020matching,
title={Matching the forecast horizon with the relevant spatial and temporal processes and data sources},
author={Adler, Peter B and White, Ethan P and Cortez, Michael H},
journal={Ecography},
volume={43},
number={11},
pages={1729--1739},
year={2020},
publisher={Blackwell Publishing Ltd Oxford, UK}
}
@article{brown2019large,
title={Large expert-curated database for benchmarking document similarity detection in biomedical literature search},
author={Brown, Peter and Tan, Aik-Choon and El-Esawi, Mohamed A and Liehr, Thomas and Blanck, Oliver and Gladue, Douglas P and Almeida, Gabriel MF and Cernava, Tomislav and Sorzano, Carlos O and Yeung, Andy WK and others},
journal={Database},
volume={2019},
year={2019},
publisher={Oxford Academic}
}
@article{harrisforecasting,
title={Forecasting biodiversity in breeding birds},
author={Harris, David J and Taylor, Shawn D and White, Ethan P}
}
@article{baldridgeextensive,
title={An extensive comparison of species-abundance distribution},
author={Baldridge, Elita and Harris, David J and Xiao, Xiao and White, Ethan P}
}
@article{weinstein2020cross,
title={Cross-site learning in deep learning RGB tree crown detection},
author={Weinstein, Ben G and Marconi, Sergio and Bohlman, Stephanie A and Zare, Alina and White, Ethan P},
journal={Ecological Informatics},
volume={56},
pages={101061},
year={2020},
publisher={Elsevier}
}
@article{michonneau2019datacarpentry,
title={datacarpentry/R-ecology-lesson: Data Carpentry: Data Analysis and Visualization in R for Ecologists, June 2019},
author={Michonneau, Jean Fran{\c{c}}ois and Teal, Tracy and Fournier, Auriel and Seok, Brian and Obeng, Adam and Pawlik, Aleksandra Natalia and Conrado, Ana Costa and Woo, Kara and Lijnzaad, Philip and Hart, Ted and others},
year={2019}
}
@article{appling2017software,
title={Software Carpentry: version control with Git},
author={Appling, Alison and Aubin, Sean and Bachant, Pete and Bailey, Scott and Baird, Daniel and Barmby, Pauline and Batut, B{\'e}r{\'e}nice and Belkin, Maxim and Bolker, Ben and Bonsma, Madeleine and others},
year={2017}
}
@article{white2012methodological,
title={Methodological tools},
author={White, Ethan P and Xiao, Xiao and Isaac, Nick JB and Sibly, Richard M},
journal={Metabolic ecology: a scaling approach},
pages={7--20},
year={2012},
publisher={John Wiley \& Sons, Ltd Chichester, UK}
}
@article{weinstein2020deepforest,
title={DeepForest: A Python package for RGB deep learning tree crown delineation},
author={Weinstein, Ben G and Marconi, Sergio and Aubry-Kientz, M{\'e}laine and Vincent, Gregoire and Senyondo, Henry and White, Ethan P},
journal={Methods in Ecology and Evolution},
volume={11},
number={12},
pages={1743--1751},
year={2020}
}
@inproceedings{weinstein2020counting,
title={Counting 50 million trees in the National Ecological Observation Network using airborne deep learning},
author={Weinstein, Ben and White, Ethan P},
booktitle={2020 ESA Annual Meeting (August 3-6)},
organization={ESA}
}
@article{snell2020simulation,
title={A simulation study of the use of temporal occupancy for identifying core and transient species},
author={Snell Taylor, Sara and Coyle, Jessica R and White, Ethan P and Hurlbert, Allen H},
journal={Plos one},
volume={15},
number={10},
pages={e0241198},
year={2020},
publisher={Public Library of Science San Francisco, CA USA}
}
@inproceedings{adler2020developing,
title={Developing theory about the predictability of nature: What, where, when and how?},
author={Adler, Peter and White, Ethan P and Cortez, Michael},
booktitle={2020 ESA Annual Meeting (August 3-6)},
year={2020},
organization={ESA}
}
@article{taylor2020influence,
title={Influence of climate forecasts, data assimilation, and uncertainty propagation on the performance of near-term phenology forecasts},
author={Taylor, Shawn D and White, Ethan P},
journal={bioRxiv},
pages={2020--08},
year={2020},
publisher={Cold Spring Harbor Laboratory}
}
@article{weinstein2020neon,
title={NEON Crowns: a remote sensing derived dataset of 100 million individual tree crowns},
author={Weinstein, Ben G and Marconi, Sergio and Bohlman, Stephanie and Zare, Alina and Singh, Aditya and Graves, Sarah J and White, Ethan},
journal={BioRxiv},
pages={2020--09},
year={2020},
publisher={Cold Spring Harbor Laboratory}
}
@inproceedings{gram2018neon,
title={NEON Resources for Your Research},
author={Gram, Wendy and Collinge, Sharon K and Guralnick, Robert and White, Ethan P and Kaspari, Michael and Desai, Ankur R and Monfils, Anna K and Carey, Cayelan and Thibault, Katherine M and Lunch, Claire K and others},
booktitle={2018 ESA Annual Meeting (August 5--10)},
year={2018},
organization={ESA}
}
@inproceedings{simonis2018prediction,
title={Prediction and forecasting of portal fauna via particle filtration},
author={Simonis, Juniper L and Yenni, Glenda M and Taylor, Shawn D and Christensen, Erica and Bledsoe, Ellen K and White, Ethan P and Ernest, SK Morgan},
booktitle={2018 ESA Annual Meeting (August 5--10)},
year={2018},
organization={ESA}
}
@article{white2015comparing,
title={Comparing snapshot methods, time series analysis, and simple bench marks for forecasting biodiversity},
author={White, Ethan P},
year={2015},
publisher={figshare}
}
@article{weinstein2020benchmark,
title={A benchmark dataset for individual tree crown delineation in co-registered airborne RGB, LiDAR and hyperspectral imagery from the National Ecological Observation Network},
author={Weinstein, Ben G and Graves, Sarah J and Marconi, Sergio and Singh, Aditya and Zare, Alina and Stewart, Dylan and Bohlman, Stephanie A and White, Ethan P},
journal={bioRxiv},
pages={2020--11},
year={2020},
publisher={Cold Spring Harbor Laboratory}
}
@article{bansalrdataretriever,
title={Rdataretriever: R Interface to the Data Retriever},
author={Bansal, Max Pohlman10 and White, Ethan P}
}
@article{senyondo2021rdataretriever,
title={Rdataretriever: R interface to the data retriever},
author={Senyondo, Henry and McGlinn, Daniel J and Sharma, Pranita and Harris, David J and Ye, Hao and Taylor, Shawn D and Ooms, Jeroen and Rodr{\'\i}guez-S{\'a}nchez, Francisco and Ram, Karthik and Pandey, Apoorva and others},
journal={Journal of Open Source Software},
volume={6},
number={57},
pages={2800},
year={2021}
}
@inproceedings{riemer2018weak,
title={Weak impacts of climatic factors on intraspecific body size variation in endothermic species},
author={Riemer, Kristina and Barve, Narayani and Stucky, Brian and Mayor, Stephen J and Guralnick, Robert P and White, Ethan P},
booktitle={2018 ESA Annual Meeting (August 5--10)},
year={2018},
organization={ESA}
}
@inproceedings{taylor2018evaluating,
title={Evaluating a near term ecological forecast of plant phenology},
author={Taylor, Shawn D and White, Ethan P},
booktitle={2018 ESA Annual Meeting (August 5--10)},
year={2018},
organization={ESA}
}
@article{weinstein2021remote,
title={A remote sensing derived data set of 100 million individual tree crowns for the National Ecological Observatory Network},
author={Weinstein, Ben G and Marconi, Sergio and Bohlman, Stephanie A and Zare, Alina and Singh, Aditya and Graves, Sarah J and White, Ethan P},
journal={Elife},
volume={10},
pages={e62922},
year={2021},
publisher={eLife Sciences Publications, Ltd}