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$Header$ -*-Fundamental-*-
Purpose(s):
Track status of autobuild features for NCO
Develop recommended ./configure invocations for each architecture
GNU autotools rely on ~/nco/autobld/config.[guess,sub]
Auto-configuration fails if these routines cannot detect your machine type
This happens periodically as newer machines are introduced
Notify the NCO project if configuration fails in either file
and we will update the config files from the upstream source,
ftp://ftp.gnu.org/pub/gnu/config/config.[guess,sub]
NCO successfully builds (e.g., with bld/Makefile) and runs on virtually all OSs.
This table tracks how well NCO _autobuilds_ (./configure's) on various OSs.
GNU Autotools seem to require a lot of hand tuning on non-LINUX platforms...
Architecture ABI32 ABI64 DAP I18N OpenMP nco_c++ check
AIX Y Y Y Y Y
ALPHA Y Y Y
CRAY
FREEBSD N(10)
HPPA
LINUX como N(11)
LINUX gcc/g++ Y N/A Y Y Y
LINUX icc Y N/A Y Y
LINUXALPHA Y Y Y
LINUXAMD64 Y Y Y
LINUXPPC Y Y N(9)
LINUXSPARC64 Y Y Y
MACOSX Y Y Y
NECSX
SGIMP64 cc/CC Y Y Y N(6)
SGIMP64 gcc/g++ N(7) Y
SUNMP cc/CC Y Y Y Y
SUNMP gcc/g++ N(13)
WIN32
-----------------------------------------------------------------------
Key: Y: feature works, N feature broken, N/A not-applicable, blank: not tested (send us your results!)
-----------------------------------------------------------------------
Table footnotes:
06. CC unable to link tst.o because -LANG:std flag not passed to crucial link CC
07. Error making ncap_yacc.c
09. tst fails to find in.nc
10. Major problems with configure script and permissions on installed files
11. Comeau (correctly) insists strdup(), strcasecmp() are not ANSI standard (this should now be fixed, retry)
13. gcc 3.2.1 problem with /usr/include/sys/stat.h in nco_fl_utl.h
17.
-----------------------------------------------------------------------
There are three basic ways to build/install NCO with the GNU autotools:
Method 1. Default installation procedure for system-wide installation.
cd ~/nco;cvs update -kk;make distclean;./configure;make;sudo make install
This simplest default method works if the required libraries
(e.g., libnetcdf.a) are in normal places (e.g., /usr/local/lib).
No special optimizations or features are activated.
Method 2. Optimized installation procedure for system-wide installation.
cd ~/nco;cvs update -kk;make distclean;./configure --enable-optimize-custom;make;sudo make install
Activating --enable-optimize-custom causes NCO to attempt to build with
a set of compiler switches customized for speed.
This will only work if Method 1 worked, so give it a whirl.
Method 3. Recommended/current custom ./configure invocation
System administrators like to install multiple compilers, and
have libraries in weird places.
Serious users of NCO are encouraged to try the configurations below.
The suggestions are alphabetized by (pvmgetarch) machine type.
************************************************************************
To build NCO versions > 2.9.9 with netCDF versions < 3.6, define the
pre-processor token NC_64BIT_OFFSET to '0', e.g., CPPFLAGS='-DNC_64BIT_OFFSET=0'
************************************************************************
Start AIX
status: Appears to work
On AIX, shared libraries and static libraries use the same namespace
Hence, probably safer to either disable-shared or disable-static
hjm: until DODS/DAP and the above mentioned shared/static problem is resolved,
AIX configure string should be: ./configure --disable-dods --disable-shared
************************************************************************
zender@bs1201en:~/nco$ pvmgetarch;uname -a;~/nco/autobld/config.guess
AIX
AIX bs1201en 1 5 0023F7EA4C00
powerpc-ibm-aix5.1.0.0
For ABI=64:
# blueice, bluevista, dave, esmf
# Enable OpenMP with CFLAGS and LDFLAGS ='-qsmp=omp'
# C_INC is a directory guaranteed to be searched first
# C_INC is useful on AIX platforms that have alternative C-headers (e.g., gcc) installed in a directory (e.g., /usr/local/include) searched for other (e.g., antlr) headers
# Specifying both C_INC and ANTLR_INC would cause the pre-processor to grab
# C-headers from C_INC and antlr headers from ANTLR_INC
# C_INC disambiguates native C-headers (/usr/include) from antlr headers (/usr/local/include) on UCI's ESMF
#
export GNU_TRP=`~/nco/autobld/config.guess`
export OBJECT_MODE='64' # AIX-specific hack
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
ANTLR_INC='/usr/local/include' C_INC='/usr/include' CC='xlc_r' CFLAGS='-qsmp=omp' CXX='xlC_r' LDFLAGS='-brtl -qsmp=omp' NETCDF_INC='/usr/local/include' NETCDF_LIB=${NETCDF_LIB} ./configure --disable-gsl --disable-shared --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# bluefire 20120718 not tested yet
export GNU_TRP=`~/nco/autobld/config.guess`
export OBJECT_MODE='64' # AIX-specific hack
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
ANTLR_INC='/contrib/antlr-2.7.7/include' C_INC='/usr/include' CC='xlc_r' CXX='xlC_r' LDFLAGS='-brtl' GSL_ROOT='/contrib/gsl-1.12' NETCDF_INC='/contrib/netcdf/4.1.3_seq/include' NETCDF_LIB='/contrib/netcdf/4.1.3_seq/include' ./configure --disable-shared --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo [email protected]:/var/ftp/pub/zender/nco/rgr
# bluefire
export GNU_TRP=`~/nco/autobld/config.guess`
export OBJECT_MODE='64' # AIX-specific hack
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
ANTLR_INC='/usr/local/include' C_INC='/usr/include' CC='xlc_r' CXX='xlC_r' LDFLAGS='-brtl' GSL_ROOT='/contrib/gsl-1.12' NETCDF_INC='/usr/local/include' NETCDF_LIB=${NETCDF_LIB} ./configure --disable-shared --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo [email protected]:/var/ftp/pub/zender/nco/rgr
For ABI=32:
export GNU_TRP=`~/nco/autobld/config.guess`
export OBJECT_MODE='32' # AIX-specific hack
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
ANTLR_INC='/usr/local/include' C_INC='/usr/include' CC='xlc_r' CXX='xlC_r' LDFLAGS='-brtl' NETCDF_INC='/usr/local/include' NETCDF_LIB='/usr/local/lib32/r4i4' ./configure --disable-shared --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
************************************************************************
End AIX
************************************************************************
************************************************************************
Start ALPHA
Status: Does not work
************************************************************************
spe171.testdrive.hp.com
CC=/bin/c89
CPPFLAGS=-D_HPUX_SOURCE
FC=/opt/fortran/bin/fort77
FFLAGS=-w
FLIBS=-lU77
CXX=aCC
[email protected]> ./pvmgetarch;uname -a;${HOME}/nco/autobld/config.guess
ALPHA
OSF1 spe171.testdrive.hp.com V5.1 2650 alpha
alpha-dec-osf5.1
gcc/g++:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
NETCDF_INC=${HOME}/include NETCDF_LIB=${HOME}/lib/${GNU_TRP} ./configure --enable-optimize-custom --prefix=${HOME} --bindir=${HOME}/bin/${GNU_TRP} --datadir=${HOME}/nco/data --libdir=${HOME}/lib/${GNU_TRP} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
************************************************************************
End ALPHA
************************************************************************
************************************************************************
Start FREEBSD
Status:
************************************************************************
bash-2.05a$ ./pvmgetarch;uname -a;~/nco/autobld/config.guess
FREEBSD
FreeBSD usf-cf-x86-freebsd-1 4.6-STABLE FreeBSD 4.6-STABLE #9: Tue Aug 20 12:33:16 PDT 2002 root@usf-cf-x86-freebsd-1:/usr/obj/usr/src/sys/GENERIC i386
gcc/g++:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
NETCDF_INC=${HOME}/include NETCDF_LIB=${HOME}/lib/${GNU_TRP} ./configure --enable-optimize-custom --prefix=${HOME} --bindir=${HOME}/bin/${GNU_TRP} --datadir=${HOME}/nco/data --libdir=${HOME}/lib/${GNU_TRP} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f config.status config.status.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo config.status.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
************************************************************************
End FREEBSD
************************************************************************
************************************************************************
Start HPPA
Status: Does not work
************************************************************************
CC=/bin/c89
CPPFLAGS=-D_HPUX_SOURCE
FC=/opt/fortran/bin/fort77
FFLAGS=-w
FLIBS=-lU77
CXX=aCC
spe169> ./pvmgetarch;uname -a;~/nco/autobld/config.guess
HPPA
HP-UX spe169 B.11.11 U 9000/800 1939057856 unlimited-user license
hppa2.0w-hp-hpux11.11
gcc/g++:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
NETCDF_INC=${HOME}/include NETCDF_LIB=${HOME}/lib/${GNU_TRP} ./configure --enable-optimize-custom --prefix=${HOME} --bindir=${HOME}/bin/${GNU_TRP} --datadir=${HOME}/nco/data --libdir=${HOME}/lib/${GNU_TRP} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
************************************************************************
End HPPA
************************************************************************
************************************************************************
Start LINUX
Status: Works
Commands for LINUX are the only ones "regularly" used after ~2010
************************************************************************
# Post upgrade requests to sysadmins at ALCF, LCRC, LLNL, NCAR, NCSA, NERSC, OLCF
# [email protected] # ALCF Maintainer =
# conda update nco # Anaconda Maintainer = Filipe Fernandes (github: ocefpaf)
# [email protected] # LCRC Maintainer = Adam
# Tony Hoang <[email protected]> # LLNL
# [email protected] # NCAR
# Yan Liu <[email protected]> # NCSA Maintainer = Yan Liu (github: yanliu-chn)
# https://nersc.service-now.com/navpage.do # NERSC Maintainer = Yun (Helen) He
# https://www.olcf.ornl.gov/support/submit-ticket # OLCF
# Subject: Please upgrade NCO module to 4.7.4
# Request: NCO 4.7.4 was released 9/18 and contains many features of interest to your ACME users. Please upgrade the system NCO module to 4.7.4 and make that the default NCO module. Thanks!
zender@dust:~/nco$ pvmgetarch;uname -a;~/nco/autobld/config.guess
LINUX
Linux dust.ess.uci.edu 2.4.19-pre8 #1 SMP Wed May 8 10:16:29 PDT 2002 i686 unknown
i686-pc-linux-gnu
# gcc/g++ Install/update NCO in personal directories using all configure defaults:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='gcc' CXX='g++' ./configure --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='gcc' CXX='g++' ./configure --disable-shared --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories with CMake:
# Generic when netCDF is in /usr (Ubuntu glace, Fedora skyglow)
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
cd ~/nco;cmake/clean.sh
cd ~/nco/cmake;cmake .. -DCMAKE_INSTALL_PREFIX=${HOME}
make install
# clang Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories with CMake:
# Generic when netCDF is in ~/anaconda (MacOS katabatic)
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
unset NETCDF_ROOT
export NETCDF_INC='/usr/local/opt/netcdf/include'
export NETCDF_LIB='/usr/local/opt/netcdf/lib'
cd ~/nco;cmake/clean.sh
cd ~/nco/cmake;cmake .. -DCMAKE_INSTALL_PREFIX=${HOME} -DNETCDF_INCLUDE:PATH=${NETCDF_INC} -DNETCDF_LIBRARY:FILE=${NETCDF_LIB}/libnetcdf.a -DHDF5_LIBRARY:FILE=${NETCDF_LIB}/libhdf5.a -DHDF5_HL_LIBRARY:FILE=${NETCDF_LIB}/libhdf5.a
make install
# gcc/g++ Zender uses this to develop/install/update netCDF4-enabled NCO in system directories with CMake:
# Generic when netCDF is in /usr (Ubuntu glace, Fedora skyglow)
cd ~/nco/cmake
cmake .. -DCMAKE_INSTALL_PREFIX=/usr/local
make
sudo make install
# gcc/g++ Zender uses this to develop/install/update netCDF4-enabled NCO in system directories with CMake, when build requirements are in unusual directories:
# netCDF4/HDF5 in /usr/local
cd ~/nco/cmake
cmake .. -DCMAKE_INSTALL_PREFIX=${HOME} -DNETCDF_INCLUDE:PATH=${NETCDF_INC} -DNETCDF_LIBRARY:FILE=${NETCDF_LIB}/libnetcdf.a -DHDF5_LIBRARY:FILE=${NETCDF_LIB}/libhdf5.a -DHDF5_HL_LIBRARY:FILE=${NETCDF_LIB}/libhdf5.a # Skyglow (Fedora does not supply szip packages)
make install
# netCDF4/HDF5 in /usr/local
cd ~/nco/cmake
cmake .. -DCMAKE_INSTALL_PREFIX=${HOME} -DNETCDF_INCLUDE:PATH=${NETCDF_INC} -DNETCDF_LIBRARY:FILE=${NETCDF_LIB}/libnetcdf.a -DHDF5_LIBRARY:FILE=${NETCDF_LIB}/libhdf5.a -DHDF5_HL_LIBRARY:FILE=${NETCDF_LIB}/libhdf5.a # Glace
make install
# gcc/g++ Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories on aims4:
# Sysadmin upgrade request:
# Latest sysadmin-compiled module usage:
# Personal recipe last modified: 2016??
# Personal recipe last used successfully: 20171221
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
ANTLR_ROOT=${HOME} CC='gcc' CXX='g++' NETCDF_ROOT='/usr/local/uvcdat/2016-01-21/Externals' UDUNITS2_PATH='/usr/local/uvcdat/2016-01-21/Externals' ./configure --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories on blues/anvil
# LCRC uses Spack module written and tested by Adam Stewart: https://github.com/LLNL/spack/pull/4370/files
# spack install --run-tests nco%gcc ^[email protected]
# Sysadmin upgrade request: [email protected]
# Latest ticket: AREQ0159277 on 20170526
# Latest sysadmin-compiled module usage: soft add +nco-4.6.7 # 20170526
# Personal recipe last modified: 20161223
# Personal recipe last used successfully: 20180302
# fails to link to udunits...why?
# nm -a /soft/udunits/2.1.21/lib/libudunits2.a | grep ut_read_xml
# First use: 20161223 Latest use: 20161223
# soft add +antlr-2.7.7 # 20161223 this ANTLR appears to be stock and not NCO-compatible
# soft add +udunits-2.1.21 # 20161223 this UDUnits was compiled without -fPIC so fails with NCO
soft add +netcdf-4.3.3.1-gnu5.2-serial
soft add +gsl-2.3
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
ANTLR_ROOT=${HOME} CC='gcc' CXX='g++' NETCDF_ROOT='/soft/netcdf_serial/4.3.3.1/gnu-5.2' UDUNITS2_PATH=${HOME} ./configure --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# icc/icpc 20171013 Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories on cheyenne:
# Sysadmin upgrade request: [email protected]
# Latest ticket: fxm on fxm
# Latest sysadmin-compiled module usage: module load nco/4.6.9 # 20171002
# Personal recipe last modified: 20180112
# Personal recipe last used successfully: 20180302 (except ncap2, which would require backporting to intel 16.0.3 to get gsl)
module purge
module load ncarenv intel ncarcompilers mpt netcdf
module add intel
module add netcdf
module add mpt
export PATH=${PATH}:/opt/pbs/bin # needed for qsub
export PATH=${PATH}:/glade/u/apps/ch/opt/netcdf/4.4.1.1/intel/17.0.1/bin # needed for ncgen
export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:/glade/u/apps/ch/opt/netcdf/4.4.1.1/intel/17.0.1/lib:/glade/u/apps/ch/opt/udunits/2.2.20/gnu/4.8.2/lib # needed to run NCO
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
cd ~/nco;git reset --hard origin/master
cd ~/nco/bld;make NETCDF_ROOT='/glade/u/apps/ch/opt/netcdf/4.4.1.1/intel/17.0.1' UDUNITS_INC='/glade/u/apps/ch/opt/udunits/2.2.20/gnu/4.8.2/include' UDUNITS_LIB='/glade/u/apps/ch/opt/udunits/2.2.20/gnu/4.8.2/lib' OPTS=D allinone;cd -
# 20150901: gcc/g++ Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories on cooley:
# Sysadmin upgrade request: 20170825
# Latest ticket: alcf-support #345910
# Latest sysadmin-compiled module usage: soft add +nco-4.6.8, soft add +netcdf-4.4.1.1
# Personal recipe last modified: 20170825
# Personal recipe last used successfully: 20171221
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
cd ~/nco;git reset --hard origin/master
ANTLR_ROOT=${HOME} CC='gcc' CXX='g++' NETCDF_ROOT='/soft/libraries/unsupported/netcdf-4.4.1.1' UDUNITS2_PATH=${HOME} ./configure --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories on cori:
# Sysadmin upgrade request: https://nersc.service-now.com/navpage.do
# Latest sysadmin-compiled module usage: module load nco/4.6.7 # 20170612 (without ncap2)
# Personal recipe last modified: 20180125
# Personal recipe last used successfully: 20180302
module load szip
module load gsl
module load udunits
module load cray-netcdf
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
ANTLR_ROOT=${HOME} ANTLR_LIB=${HOME}/lib_cori CC='icc' CXX='icpc' GSL_ROOT='/usr/common/software/gsl/2.1/intel' NETCDF_INC='/opt/cray/pe/netcdf/4.4.1.1.3/INTEL/16.0/include' NETCDF_LIB='/opt/cray/pe/netcdf/4.4.1.1.3/INTEL/16.0/lib' NETCDF_ROOT='/opt/cray/pe/netcdf/4.4.1.1.3' UDUNITS2_PATH='/usr/common/software/udunits/2.2.19/hsw/intel' ./configure --prefix=${HOME} --bindir=${HOME}/bin_cori --datadir=${HOME}/nco/data --libdir=${HOME}/lib_cori --mandir=${HOME}/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# acme: http://www.gnu.org/software/automake/manual/automake.html search for "shared by two hosts" use
# gcc/g++ Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories on edison:
# Sysadmin upgrade request: https://nersc.service-now.com/navpage.do
# Latest ticket: INC0106410 on 20170804
# Latest sysadmin-compiled module usage: module load nco/4.6.7 # 20170809 (with ncap2)
# Personal recipe last modified: 20170807
# Personal recipe last used successfully: 20170302
module load szip
module load gsl
module load udunits2
module load cray-netcdf
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
ANTLR_ROOT=${HOME} ANTLR_LIB=${HOME}/lib_edison CC='icc' CXX='icpc' GSL_ROOT='/usr/common/usg/gsl/2.3/intel' NETCDF_INC='/opt/cray/pe/netcdf/4.4.1.1.3/INTEL/16.0/include' NETCDF_LIB='/opt/cray/pe/netcdf/4.4.1.1.3/INTEL/16.0/lib' NETCDF_ROOT='/opt/cray/pe/netcdf/4.4.1.1.3' UDUNITS2_PATH='/usr/common/usg/udunits/2.1.24/intel' ./configure --prefix=${HOME} --bindir=${HOME}/bin_edison --datadir=${HOME}/nco/data --libdir=${HOME}/lib_edison --mandir=${HOME}/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# 20160421: gcc/g++ Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories on mira:
# Sysadmin upgrade request: 20170825
# Latest sysadmin-compiled module usage: # fxm
# Personal recipe last modified: 2016??
# Personal recipe last used successfully: 2016??
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
ANTLR_ROOT=${HOME} CC='gcc' CXX='g++' NETCDF_ROOT='/soft/libraries/netcdf/current' UDUNITS2_PATH=${HOME} ./configure --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ 20160107 Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories on rhea:
# Sysadmin upgrade request: https://www.olcf.ornl.gov/support/submit-ticket
# Latest ticket: 358890 on 20170526
# Latest sysadmin-compiled module usage: module load nco/4.6.6 # 20170515
# Personal recipe last modified: 20170814
# Personal recipe last used successfully: 20180302
export LINUX_CC='gcc -std=c99 -pedantic -D_DEFAULT_SOURCE -D_BSD_SOURCE -D_POSIX_SOURCE'
export LINUX_CXX='g++ -std=c++11'
export LINUX_FC='gfortran'
module unload PE-intel # CSZ
module load PE-gnu # CSZ
module add gsl hdf5
module load netcdf/4.4.1
export LD_LIBRARY_PATH=/autofs/nccs-svm1_sw/rhea/.swci/0-core/opt/spack/20170224/linux-rhel6-x86_64/gcc-4.4.7/netcdf-4.4.1-uroyzcwi6fc3kerfidguoof7g2vimo57/lib:/sw/redhat6/szip/2.1/rhel6.6_gnu4.8.2/lib:${LD_LIBRARY_PATH}
export NETCDF_ROOT=/autofs/nccs-svm1_sw/rhea/.swci/0-core/opt/spack/20170224/linux-rhel6-x86_64/gcc-4.4.7/netcdf-4.4.1-uroyzcwi6fc3kerfidguoof7g2vimo57
export PATH=/autofs/nccs-svm1_sw/rhea/.swci/0-core/opt/spack/20170224/linux-rhel6-x86_64/gcc-4.4.7/netcdf-4.4.1-uroyzcwi6fc3kerfidguoof7g2vimo57/bin:${PATH}
cd ~/nco;git reset --hard origin/master
cd ~/nco/bld;make ANTLR_ROOT=${HOME} NETCDF_ROOT='/autofs/nccs-svm1_sw/rhea/.swci/0-core/opt/spack/20170224/linux-rhel6-x86_64/gcc-4.4.7/netcdf-4.4.1-uroyzcwi6fc3kerfidguoof7g2vimo57' SZ=Y SZ_LIB='/sw/redhat6/szip/2.1/rhel6.6_gnu4.8.2/lib' UDUNITS_INC='/sw/redhat6/udunits/2.1.24/rhel6.4_intel13.1.3/include' UDUNITS_LIB='/sw/redhat6/udunits/2.1.24/rhel6.4_intel13.1.3/lib' OPTS=D OMP=Y allinone;cd -
# 20160421: gcc/g++ Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories on roger:
# Sysadmin upgrade request: Yan Liu <[email protected]>
# Latest sysadmin-compiled module usage: module load nco/4.6.5 # 20170315
# Personal recipe last modified: 20170424
# Personal recipe last used successfully: 20170424
module load netcdf/4.4.0
module load udunits
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
ANTLR_ROOT=${HOME} ANTLR_LIB=${HOME}/lib CC='gcc' CXX='g++' UDUNITS2_PATH='/sw/udunits-2.1.24' ./configure --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# 20180124: gcc/g++ Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories on theta:
# Sysadmin upgrade request:
# Latest sysadmin-compiled module usage: # fxm
# Personal recipe last modified: 20180124
# Problem is that .bashrc resets PATH so cannot find icc/gcc ...
# Personal recipe last used successfully: fxm
# module use /projects/ClimateEnergy_2/software/modulefiles/all
# module load e3sm-unified/1.1.2-py2-x
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
module load cray-netcdf
#module add PrgEnv-intel
#module swap PrgEnv-intel PrgEnv-gnu
#module swap PrgEnv-gnu PrgEnv-intel
ANTLR_ROOT=${HOME} ANTLR_LIB=${HOME}/lib_theta CC='icc' CXX='icpc' GSL_ROOT='csz_not_available_yet' NETCDF_INC='/opt/cray/pe/netcdf/4.4.1.1.6/intel/16.0/include' NETCDF_LIB='/opt/cray/pe/netcdf/4.4.1.1.6/intel/16.0/lib' NETCDF_ROOT='/opt/cray/pe/netcdf/4.4.1.1.6' UDUNITS2_PATH='csz_not_available_yet' ./configure --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ 20160420 Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories on titan:
# Sysadmin upgrade request: https://www.olcf.ornl.gov/support/submit-ticket
# Latest ticket: 347675 on 20170316
# Latest sysadmin-compiled module usage: module load nco/4.6.6 # 20170411
# Personal recipe last modified: 20170814
# Personal recipe last used successfully: 20180302
export LINUX_CC='gcc -std=c99 -pedantic -D_DEFAULT_SOURCE -D_BSD_SOURCE -D_POSIX_SOURCE'
module add gcc # change GCC from v 4.3.4 to 4.9.0
#module add gsl # not used yet
#module add cray-netcdf # not used yet
#module add udunits # not used yet
export PATH=${PATH}:'/opt/cray/netcdf/4.4.1.1/bin'
cd ~/nco/bld;make ANTLR_ROOT=${HOME} GSL=N NETCDF_ROOT='/opt/cray/netcdf/4.4.1.1' NETCDF_INC='/opt/cray/netcdf/4.4.1.1/GNU/49/include' NETCDF_LIB='/opt/cray/netcdf/4.4.1.1/GNU/49/lib' OPTS=D OMP=Y UDUNITS_INC='/sw/xk6/udunits/2.1.24/sl_gcc4.5.3/include' UDUNITS_LIB='/sw/xk6/udunits/2.1.24/sl_gcc4.5.3/lib -lexpat' allinone;cd -
# icc/icpc 20160107 Zender tried and failed to use this to develop/install/update netCDF4-enabled NCO in personal directories on rhea:
export GNU_TRP=`~/nco/autobld/config.guess`
# Commands used for Makefile builds
module avail
. ~/.bashrc
# module add intel gsl netcdf # No! netcdf/hdf from modules causes unresolved linker error
module add intel gsl
module add climate/netcdf/4.3.3.1
export LD_LIBRARY_PATH='/ccs/proj/cli900/sw/redhat/netcdf/4.3.3.1/rhel6.6_intel-14.0.4--with-dap+hdf4/lib':${LD_LIBRARY_PATH}
export NETCDF_ROOT='/ccs/proj/cli900/sw/redhat/netcdf/4.3.3.1/rhel6.6_intel-14.0.4--with-dap+hdf4'
cd ~/nco/bld;make ANTLR_ROOT=${HOME} NETCDF_ROOT='/ccs/proj/cli900/sw/redhat/netcdf/4.3.3.1/rhel6.6_intel-14.0.4--with-dap+hdf4' UDUNITS_INC='/sw/redhat6/udunits/2.1.24/rhel6.4_intel13.1.3/include' UDUNITS_LIB='/sw/redhat6/udunits/2.1.24/rhel6.4_intel13.1.3/lib' OPTS=D OMP=Y allinone;cd -
cd ~/nco/bld;make ANTLR_ROOT=${HOME} NETCDF_ROOT='/ccs/proj/cli900/sw/redhat/netcdf/4.3.3.1/rhel6.6_intel-14.0.4--with-dap+hdf4' SZ=Y SZ_LIB='/sw/redhat6/szip/2.1/rhel6.6_gnu4.8.2/lib' UDUNITS_INC='/sw/redhat6/udunits/2.1.24/rhel6.4_intel13.1.3/include' UDUNITS_LIB='/sw/redhat6/udunits/2.1.24/rhel6.4_intel13.1.3/lib' OPTS=D OMP=Y allinone;cd -
# 20160107 Zender tried and failed these Commands used for Configure builds with icc/icpc on rhea
module add intel gsl udunits climate/netcdf/4.3.3.1
export LDFLAGS="${NETCDF_CLIB} ${GSL_LIB} ${SZIP_POST_LINK_OPTS}"
export CPPFLAGS="-I${NETCDF_DIR}/include ${GSL_INCLUDE_OPTS} ${SZIP_INCLUDE_OPTS}"
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='icc' CXX='icpc' NETCDF_ROOT='/ccs/proj/cli900/sw/redhat/netcdf/4.3.3.1/rhel6.6_intel-14.0.4--with-dap+hdf4' UDUNITS2_PATH='/sw/rhea/udunits/2.1.24/rhel6.6_gnu4.4.7' ./configure --disable-shared --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ Sysadmins: use this to install/update NCO in /opt/nco
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
./configure --disable-shared --enable-optimize-custom --prefix=/opt/nco > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
sudo make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ Sysadmins: use this to install/update NCO in /usr/local
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
./configure --disable-shared --enable-optimize-custom --prefix=/usr/local > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
sudo make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# g++/g++ Zender uses this to compile NCO with g++ (not recommended!) instead of gcc
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='g++' CXX='g++' ./configure --disable-shared --disable-udunits --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ Zender uses this to compile NCO with GCC and netCDF4
# --enable-optimize-custom fails with netCDF4 which shadows "access" variable
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='gcc' CXX='g++' NETCDF4_ROOT='/usr/local/netcdf4' ./configure --enable-netcdf4 --enable-dap-netcdf --disable-shared --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
gcc/g++ Developers use --enable-maintainer-mode to verify auto-tools work correctly, and to mandate rebuilding of "special files" (ncap_yacc.c, ncap_lex.c) correctly:
(requires complete, up-to-date, GNU development toolchain):
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
aclocal # Create aclocal.m4 from acinclude.m4
autoheader # Create config.h.in from configure.ac
automake --foreign # Create Makefile.in from Makefile.am
autoconf # Create ./configure from ./configure.ac
# Debugging
./configure --disable-shared --enable-debug-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
# Production
./configure --disable-shared --enable-maintainer-mode --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
como:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='como --c99' CXX='como' ./configure --disable-shared --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
icc:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='icc' CPPFLAGS="-I${IA32ROOT}/include -I${IA32ROOT}/include/c++" CXX='icpc' LDFLAGS="-L${IA32ROOT}/lib" ./configure --disable-shared --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
pathcc:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='pathcc' CXX='pathCC' ./configure --disable-shared --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
pgcc:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='pgcc' CXX='pgCC' ./configure --disable-shared --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
pgcc on mpc64.nacs.uci.edu (C-shell environment):
setenv GNU_TRP `${HOME}/nco/autobld/config.guess`
cd ${HOME}/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
# Bash
ANTLR_ROOT='/software/antlr' CC='pgcc' CXX='pgCC' UDUNITS_PATH='/software/udunits' ./configure --disable-shared --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man >&! nco.configure.${GNU_TRP}.foo
# Csh
setenv ANTLR_ROOT '/software/antlr';setenv CC 'pgcc';setenv CXX 'pgCC';setenv UDUNITS_PATH '/software/udunits';./configure --disable-shared --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man >&! nco.configure.${GNU_TRP}.foo
# env
env ANTLR_ROOT='/software/antlr' CC='pgcc' CXX='pgCC' PATH=${PATH}\:'/software/netcdf/bin'\:'/software/antlr/bin' UDUNITS_PATH='/software/udunits' ./configure --disable-shared --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man >&! nco.configure.${GNU_TRP}.foo
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# Old machines:
# gcc/g++ Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories on pileus:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
ANTLR_ROOT=${HOME} CC='gcc' CXX='g++' NETCDF_ROOT='/opt/ACME/uvcdat-2.2-build/install/Externals' UDUNITS2_PATH='/opt/ACME/uvcdat-2.2-build/install/Externals' ./configure --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# icc/icpc 20160217 Zender uses this to develop/install/update netCDF4-enabled NCO in personal directories on yellowstone:
# Sysadmin upgrade request: [email protected]
# Latest ticket: 172597 on 20170526
# Latest sysadmin-compiled module usage: module load nco/4.6.9 # 20171002
# Personal recipe last modified: 20170812
# Personal recipe last used successfully: 20171108
module add intel/16.0.3;module add gsl;module add netcdf/4.4.1;
export PATH=${PATH}:/glade/apps/opt/netcdf/4.4.1/intel/16.0.3/bin # needed for ncgen
export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:/glade/apps/opt/netcdf/4.4.1/intel/16.0.3/lib # needed to run NCO
cd ~/nco;git reset --hard origin/master
cd ~/nco/bld;make NETCDF_ROOT='/glade/apps/opt/netcdf/4.4.1/intel/16.0.3' UDUNITS_INC='/glade/apps/opt/udunits/2.1.24/intel/12.1.4/include' UDUNITS_LIB='/glade/apps/opt/udunits/2.1.24/intel/12.1.4/lib' OPTS=D allinone;cd -
************************************************************************
End LINUX
************************************************************************
************************************************************************
Begin NETCDF4
************************************************************************
To build NCO with netCDF4, we require changes from the default process:
- Build HDF5 libraries and install them as you normally would, e.g., in /usr/local
- Identify the installation (--prefix=) directory for netCDF4.
Keep this separate from the netCDF3 installation because the netCDF4
library is still called libnetcdf.a and until netCDF4 is debugged,
you'll want both netCDF3 and netCDF4 around.
The configure options to use for netCDF4 are:
./configure --enable-netcdf4 --enable-dap-netcdf --disable-shared \
NETCDF4_ROOT=/where/you/unpacked/netcdf4
Alternatively, you can export an environment variable NETCDF4_ROOT to
the same value and the configure script will pick it up.
- As of 20051129, building NCO with netCDF4 and MPI does not work
************************************************************************
End NETCDF4
************************************************************************
************************************************************************
Start LINUXAMD64
Status: Appears to work. Make sure to compile netCDF and DAP with CFLAGS+='-fPIC'
************************************************************************
zender@sand:~/nco/bld$ ./pvmgetarch;uname -a;~/nco/autobld/config.guess
LINUXAMD64
Linux sand.ess.uci.edu 2.6.8.1-4-amd64-generic #1 Thu Dec 16 11:44:05 UTC 2004 x86_64 GNU/Linux
x86_64-unknown-linux-gnu
# gcc/g++ Regular (non-root) users build NCO with system-supplied netCDF and install in your own directories
# Zender uses this on MACOSX aerosol/firn as well
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='gcc' CFLAGS='' CXX='g++' CXXFLAGS='' ./configure --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ Sysadmins use/modify this to install/update NCO in /usr/local, based on netCDF4 also in /usr/local (works on givre 20100727):
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CPPFLAGS='-DHAVE_NETCDF4_H -I/usr/local/include' LDFLAGS='-L/usr/local/lib' ./configure --prefix='/usr/local' --enable-ncap2 --enable-netcdf4 > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
sudo make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ Zender uses this to debug NCO with pre-built (i.e., yum/dnf install'd or aptitude install'd) netCDF in /usr (glace)
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='gcc' CFLAGS='' CXX='g++' CXXFLAGS='' NETCDF_INC='/usr/include' NETCDF_LIB='/usr/lib' ./configure --enable-debug-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ Zender uses this to debug NCO with custom-install netCDF (and ESMF) binaries in /usr/local (givre, roulee, grele)
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='gcc' CXX='g++' NETCDF_INC='/usr/local/include' NETCDF_LIB='/usr/local/lib' ./configure --enable-debug-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ Zender uses this to debug NCO with pre-built netCDF binaries in /usr (frazil, skyglow)
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
# Pre-20170810 GCC7 dies on nco_yyget_leng() prototype with --enable-debug-custom option
#CC='gcc' CFLAGS='' CXX='g++' CXXFLAGS='' NETCDF_INC='/usr/include' NETCDF_LIB='/usr/lib' ./configure --enable-debug-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
# 20170810 Produce core dumps and symbols, turn-on -Wall, without using --enable-debug-custom
CC='gcc' CFLAGS='-Wall -DNCO_ABORT_ON_ERROR' CXX='g++' CXXFLAGS='-Wall' NETCDF_INC='/usr/include' NETCDF_LIB='/usr/lib' ./configure --enable-debug-symbols --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# gcc/g++ Zender uses this to debug NCO with custom-built netCDF binaries in /usr/local with clang (frazil)
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
# 20170810 Produce core dumps and symbols, turn-on -Wall, without using --enable-debug-custom
CC='clang' CFLAGS='-Wall -DNCO_ABORT_ON_ERROR' CXX='clang -std=c++11' CXXFLAGS='-Wall' NETCDF_INC='/usr/local/include' NETCDF_LIB='/usr/local/lib' ./configure --enable-debug-symbols --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
# g++/g++ Zender uses this to compile NCO with _g++_ (not recommended for normal use)
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='g++' CFLAGS='' CXX='g++' CXXFLAGS='' ./configure --disable-udunits --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
pgcc/pgCC:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='pgcc' CFLAGS='-fast -fPIC' CXX='pgCC' CXXFLAGS='-fast -fPIC' ./configure --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
/bin/cp -f libtool nco.libtool.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.libtool.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
************************************************************************
End LINUXAMD64
************************************************************************
************************************************************************
Start LINUXALPHA
Status: Appears to work (of course C++ compiler requires valarray)
************************************************************************
zender@ess1:/usr/home/zender/nco$ pvmgetarch;uname -a;~/nco/autobld/config.guess
LINUXALPHA
Linux ess1.ess.uci.edu 2.2.15 #1 Thu May 18 17:22:29 EDT 2000 alpha unknown
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
./configure --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
zender@usf-cf-alpha-linux-1:~/nco/bld$ ./pvmgetarch;uname -a;~/nco/autobld/config.guess
LINUXALPHA
Linux usf-cf-alpha-linux-1 2.4.17 #1 SMP Fri Jan 4 13:37:30 PST 2002 alpha unknown
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
NETCDF_INC=${HOME}/include NETCDF_LIB=${HOME}/lib/${GNU_TRP} ./configure --enable-optimize-custom --prefix=${HOME} --bindir=${HOME}/bin/${GNU_TRP} --datadir=${HOME}/nco/data --libdir=${HOME}/lib/${GNU_TRP} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
************************************************************************
End LINUXALPHA
************************************************************************
************************************************************************
Start LINUXPPC
Status: tst fails to find in.nc
************************************************************************
zender@usf-cf-ppc-linux-1:~/nco/bld$ ./pvmgetarch;uname -a;~/nco/autobld/config.guess
UNKNOWN
Linux usf-cf-ppc-linux-1 2.2.17-pre1 #2 SMP Fri Jun 16 12:39:25 MDT 2000 ppc unknown
gcc/g++:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
NETCDF_INC=${HOME}/include NETCDF_LIB=${HOME}/lib/${GNU_TRP} ./configure --enable-optimize-custom --prefix=${HOME} --bindir=${HOME}/bin/${GNU_TRP} --datadir=${HOME}/nco/data --libdir=${HOME}/lib/${GNU_TRP} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
************************************************************************
End LINUXPPC
************************************************************************
************************************************************************
Start LINUXSPARC64
Status: Appears to build correctly
************************************************************************
zender@usf-cf-sparc-linux-1:~/nco/bld$ ./pvmgetarch;uname -a;~/nco/autobld/config.guess
UNKNOWN
Linux usf-cf-sparc-linux-1 2.4.18 #2 Thu Apr 11 14:37:17 EDT 2002 sparc64 unknown
gcc/g++:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
NETCDF_INC=${HOME}/include NETCDF_LIB=${HOME}/lib/${GNU_TRP} ./configure --enable-optimize-custom --prefix=${HOME} --bindir=${HOME}/bin/${GNU_TRP} --datadir=${HOME}/nco/data --libdir=${HOME}/lib/${GNU_TRP} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
************************************************************************
End LINUXSPARC64
************************************************************************
************************************************************************
Start MACOSX
Status: works. rorik Thu Oct 30 12:09:15 AKST 2003
MACOSX requires netCDF3.x be built with CFLAGS=-fno-common to link with NCO
This may also be the case for netCDF4.
NCO's configure detects MACOSX adds '-fno-common' automatically to CFLAGS
MACOSX also requires '--disable-shared' on the configure line
************************************************************************
zender@cg1:~/nco/bld$ ~/sh/pvmgetarch;uname -a;~/nco/autobld/config.guess
MACOSX
Darwin cg1.calit2.uci.edu 8.2.0 Darwin Kernel Version 8.2.0: Fri Jun 24 17:46:54 PDT 2005; root:xnu-792.2.4.obj~3/RELEASE_PPC Power Macintosh powerpc
powerpc-apple-darwin8.2.0
gcc/g++:
export PVM_ARCH=`~/nco/bld/pvmgetarch`
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
NETCDF_INC=${HOME}/include NETCDF_LIB=${HOME}/lib ./configure --disable-regex --disable-shared --prefix=${HOME} --bindir=${HOME}/bin --datadir=${HOME}/nco/data --libdir=${HOME}/lib --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
************************************************************************
End MACOSX
************************************************************************
************************************************************************
Start SGIMP64
Status: -LANG:std not passed to final CC link command for tst.o
************************************************************************
zender@krein:~/nco$ pvmgetarch;uname -a;~/nco/autobld/config.guess
SGIMP64
IRIX64 tempest 6.5 07080049 IP35 mips
mips-sgi-irix6.5
cc/CC ABI64:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='cc -c99' CFLAGS='-64 -mips4' CXX='CC -64 -LANG:std' CXXFLAGS='-64 -mips4 -LANG:std' LDFLAGS='-64 -LANG:std' NETCDF_INC='/usr/local/include' UDUNITS_PATH='/contrib/udunits-1.12.4' ./configure --disable-ncoxx --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
cc/CC ABI32:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='cc -c99' CXX='CC' CXXFLAGS='-LANG:std' LDFLAGS='-LANG:std' NETCDF_INC='/usr/local/include' NETCDF_LIB='/usr/local/lib32/r4i4' UDUNITS_PATH='/contrib' ./configure --disable-ncoxx --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
gcc/g++ ABI32:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='gcc' CXX='g++' NETCDF_INC='/usr/local/include' ./configure --disable-ncoxx --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
************************************************************************
End SGIMP64
************************************************************************
************************************************************************
Start SUNMP
Status:
Works fine with native compilers
************************************************************************
zender@flagstaff:~/nco$ pvmgetarch;uname -a;~/nco/autobld/config.guess
SUNMP
SunOS goldhill 5.9 Generic_117171-12 sun4u sparc SUNW,Ultra-60
sparc-sun-solaris2.9
For ABI=64:
cc/CC:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='/opt/SUNWspro/bin/cc' CPPFLAGS='-DNC_64BIT_OFFSET=0' CXX='/opt/SUNWspro/bin/CC' ./configure --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
For ABI=32:
cc/CC:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='/opt/SUNWspro/bin/cc' CPPFLAGS='-DNC_64BIT_OFFSET=0' CXX='/opt/SUNWspro/bin/CC' LD='/usr/ccs/bin/ld -z muldefs' LDFLAGS='-z muldefs -L/opt/SUNWspro/lib' ./configure --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
gcc/g++:
export GNU_TRP=`~/nco/autobld/config.guess`
cd ~/nco;/bin/rm -f *.${GNU_TRP}.foo;make distclean
CC='gcc' CPPFLAGS='-DNC_64BIT_OFFSET=0' CXX='g++' ./configure --enable-optimize-custom --prefix=${HOME} --bindir=${MY_BIN_DIR} --datadir=${HOME}/nco/data --libdir=${MY_LIB_DIR} --mandir=${HOME}/nco/man > nco.configure.${GNU_TRP}.foo 2>&1
/bin/cp -f config.log nco.config.log.${GNU_TRP}.foo
make clean;make > nco.make.${GNU_TRP}.foo 2>&1
make check >> nco.make.${GNU_TRP}.foo 2>&1
make install >> nco.make.${GNU_TRP}.foo 2>&1
scp nco.configure.${GNU_TRP}.foo nco.config.log.${GNU_TRP}.foo nco.make.${GNU_TRP}.foo dust.ess.uci.edu:Sites/nco/rgr
************************************************************************
End SUNMP
************************************************************************