diff --git a/WillianVieira.pdf b/WillianVieira.pdf new file mode 100644 index 0000000..22fa412 Binary files /dev/null and b/WillianVieira.pdf differ diff --git a/index.html b/index.html new file mode 100644 index 0000000..41d8ec9 --- /dev/null +++ b/index.html @@ -0,0 +1,34456 @@ + + + + + + + + + + + Willian’s CV + + + + + + + + + + + + + + + + + +
+

Aside

+
+

Contact

+ +
+
+

Quantitative skills

+

Bayesian statistics, Hierarchical models, Random Forest, Mathematical modelling, Regression

+
+
+

Programming skills

+

Data analysis:
R, Python, Stan, HPC, QGIS

+

Data base: SQLite

+

Automation/reports:
markdown, pandoc, Quarto,
LateX, bash, makefile

+

Web: HTML/CSS, ShinyApp

+

DevOps (CI/CD): Git, GitHub, Docker, GitHub Actions

+
+
+

Languages

+

Portuguese Native
+French Full Professional
+English Full Professional

+
+
+

Disclaimer

+

Made with pagedown.

+

The source code is available at github.com/willvieira/cv.

+

Last updated on 2024-03-01.

+

Download a PDF of this CV

+
+
+
+

Main

+
+

Willian Vieira PhD candidate

+

< + > Quantitative ecologist | I love to automate stuff

+
+
+

Education

+
+

PhD. Candidate, Ecology

+

Integrative Ecology Lab - Université de Sherbrooke, Canada

+

N/A

+

Current - 2017

+
    +
  • Developing demographic models to better understand how trees will face climate change
  • +
  • Integral Projection Models | mathematical modeling | Hierachical models | Bayesian statistics | Quantitative thecniques
  • +
+
+
+

Masters 2, Agroecology and Resource Management

+

École Nationale Supérieure des Sciences Agronomiques
de Bordeaux (BSA), Bordeaux, France

+

N/A

+

2016 - 2015

+
    +
  • Thesis: “Modelling the dispersion of weed species in agricultural landscapes”
  • +
  • Process-based modelling | R | Sensitivity analysis
  • +
+
+
+

BSc in Agronomy

+

Universidade Federal de Santa Catarina, Florianópolis, Brazil

+

N/A

+

2015 - 2010

+
+
+
+

Consulting Experience

+
+

Biostatistician

+

Environment and Climate Change Canada (ECCC)

+

N/A

+

2022 - 2020

+
    +
  • Boreal Optimal Sampling Strategy for birds monitoring in Quebec
  • +
  • Scripting spatial analysis | spatially stratified sampling | R
  • +
  • Code: , Report:
  • +
+
+
+
+

Research Experience

+
+

Research visiting

+

National Research Institute for Agriculture, Food and
Environment INRAe - EcoSystèmes et Sociétés En Montagne

+

Grenoble, France

+

2018

+
    +
  • Collaboration on the mathematical formulation
    of how forest management affect forest dynamics
  • +
  • Analytical analysis | Modelling | ShinyApp | R package
  • +
+
+
+

Mitacs Internship

+

Ouranos

+

Montréal, CA

+

2017

+
    +
  • Forest dynamic models | Climate change models
  • +
+
+
+

Master 2 internship

+

French National Institute for Agricultural Research
(INRA - UMR 1347 Agroecologie)

+

Dijon, France

+

2016

+
    +
  • Modelling weed dispersion in agricultural landscapes to improve the sustainable management of weeds
  • +
+
+
+

Undergraduate Researcher

+

Group of Research in Tropical forests
(NPFT - Universidade Fedaral de Santa Catarina)

+

Florianópolis, Brazil

+

2015 - 2014

+
    +
  • Characterize the dynamics of tropical forest
  • +
  • Data analysis | Statistics | R | data management | field work
  • +
+
+
+

Undergraduate Researcher

+

Laboratory of Plant Developmental Physiology and Genetics
(LFDGV - Universidade Fedaral de Santa Catarina)

+

Florianópolis, Brazil

+

2014 - 2012

+
    +
  • Quantify the genetic diversity of tropical trees
  • +
  • Lab work | PCR | microsatellites markers | genotyping
  • +
+
+
+
+

Teaching Experience

+
+

Biodiversity Modelling Summer School

+

Bios\(^2\) summer school

+

Sherbrooke, CA

+

2021

+
    +
  • Teaching assistant and lectured for graduate students
  • +
  • Evaluating ecological models using Bayesian statistics
  • +
+
+
+

Methods in computational ecology

+

BIO500 - Départament de biologie, Université de Sherbrooke

+

Sherbrooke, CA

+

2020 - 2019

+
    +
  • Teaching assistant and lectured for undergraduate students
  • +
  • Tools for reproducible science | SQL | Git | R | LaTeX | Markdown | Makefile
  • +
+
+
+

Software and Data Carpentry workshop

+

Bios\(^2\) training for graduate students

+

Online

+

2020

+
    +
  • The Unix Shell
  • +
  • Data Management with SQL for Ecologists
  • +
+
+
+

QCBS R Workshops

+

Université de Sherbrooke & Université du Québec à Rimouski

+

Sherbrooke & Rimouski, CA

+

2019 - 2018

+
    +
  • Instructor to graduate students
  • +
  • Workshops: Introduction to R | Data management | Data Visualization | Control flow | Linear models
  • +
+
+
+

Probability and statistics

+

GCI145 - Faculté de génie, Université de Sherbrooke

+

Sherbrooke, CA

+

2019

+
    +
  • Teaching assistant and lectured for undergraduate students
  • +
  • Probability theory | Distribution | Descriptive statistics | Hypothesis testing | Linear models
  • +
+
+
+

Soil ecology

+

Départament de biologie - Université de Sherbrooke

+

Sherbrooke, CA

+

2018 - 2017

+
    +
  • Teaching assistant and lectured for undergraduate students
  • +
  • Lab | Covered methods to determine soil texture
  • +
+
+
+

Modelisation de la dynamique forestier du Quebec face au changement climatique

+

Départament de biologie, Université de Sherbrooke

+

Sherbrooke, CA

+

2018

+
    +
  • Guest lecturer in Plant Ecology (Presentation) to undergraduate students
  • +
  • Covered modelling approaches in ecology | model construction and applications
  • +
+
+
+

Introduction to scientific programming

+

BIO109 - Départament de biologie, Université de Sherbrooke

+

Sherbrooke, CA

+

2018

+
    +
  • Teaching assistant for undergraduate students
  • +
  • Pogramming concepts | Data management | Control flow | R language
  • +
+
+
+
+

Training

+
+

Data visualization and biodiversity modelling

+

Summer school - Bios²

+

Magog, CA

+

2022

+
    +
  • Business intelligence | data user profiles | Conceptualize interactive dashboard | Figma
  • +
+
+
+

Mathematical Modelling in Ecology and Evolution

+

Workshop - Bios²

+

Remote

+

2020

+
    +
  • Developing equations | Finding equilibria | analyzing stability | Maxima
  • +
+
+
+

Stage-based demographic models in ecology, evolution and conservation biology

+

NERC Advanced Training - University of Oxford

+

Oxford, UK

+

2019

+
    +
  • Theory and practice | Matrix population models | Integral Projection Models
  • +
+
+
+

Biodiversity Modelling

+

Summer school - Université de Sherbrooke

+

Magog, CA

+

2019

+
    +
  • Theory and practice on different biodiversity modelling techniques
  • +
  • Statistics | Differential equations | Stochastic simulations | Climate change models | uncertainty tracking
  • +
+
+
+

Data-driven ecological synthesis

+

DDES summer school - Université de Montréal

+

Montréal, CA

+

2017

+
    +
  • Good practices in scientific computing
  • +
  • Data management | Mathematical tools | Data analysis tools | Parallel computing | Rreproducible science
  • +
+
+
+

Bayesian Statistics for Ecologists

+

Summer school - Université de Sherbrooke

+

Magog, CA

+

2017

+
    +
  • Theory and practice using Stan | Probability theory | Likelihood | MCMC | Hierarchical modelling | Model comparison
  • +
+
+
+
+

Publications

+
+

Paying colonization credit with forest management could accelerate the range shift of temperate trees under climate change

+

Under review. Preprint hosted on

+

N/A

+

2023

+

Vieira, W., Boulangeat, I., Brice, M.H., Bradley, R.L., Gravel, D.

+
+
+

Moderate disturbances accelerate forest transition dynamics under climate change in the temperate–boreal ecotone of eastern North America

+

Global Change Biology

+

N/A

+

2020

+
    +
  • Brice, M.H., Vissault, S., Vieira, W., Gravel, D., Legendre, P., Fortin, M.J.
  • +
+
+
+

Genetic and demographic aspects of Varronia curassavica Jacq. in a heterogeneous coastal ecosystem

+

Anais da Academia Brasileira de Ciências

+

N/A

+

2020

+
    +
  • Hoeltgebaum, M.P., Lauterjung, M.B., Montagna, T., Candido-ribeiro, R., Vieira, W., Bernardi, A.P., Cristofolini, C., Reis, M.S.D.
  • +
+
+
+
+

Selected Talks and Posters

+
+

Lab: {STManaged} R package

+

Biodiversity Modelling summer school

+

Magog, CA

+

2020

+
    +
  • Demonstration of my R package to be used during the intensive course (Presentation)
  • +
+
+
+

Using Integral Projection Models to assess how Contemporary Niche Theory predicts trees range limits

+

British Ecological Society Annual Meeting

+

Belfast, UK

+

2019

+ +
+
+

The effect of forest management on forest distribution under climate change

+

QCBS annual symposium

+

Montréal, CA

+

2018

+ +
+
+

Can forest management help increase the rate of forest migration northward to follow climate change?

+

European Geosciences Union General Assembly

+

Vienna, AT

+

2017

+ +
+
+
+ + + + + + + +