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environment.yml
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environment.yml
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name: babel
channels:
- pytorch
- anaconda
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_llvm
- absl-py=0.10.0=py37_0
- adjusttext=0.7.3.1=py_1
- anndata=0.6.22.post1=py_0
- argon2-cffi=20.1.0=py37h7b6447c_1
- astropy=4.0.1.post1=py37h8f50634_0
- async_generator=1.10=py37h28b3542_0
- attrs=20.2.0=py_0
- backcall=0.2.0=py_0
- blas=2.17=openblas
- bleach=3.2.1=py_0
- blosc=1.19.0=hd408876_0
- brotlipy=0.7.0=py37h7b6447c_1000
- bzip2=1.0.8=h7b6447c_0
- c-ares=1.16.1=h7b6447c_0
- ca-certificates=2020.10.14=0
- cached-property=1.5.2=py_0
- cairo=1.14.12=h8948797_3
- captum=0.2.0=0
- certifi=2020.6.20=py37_0
- cffi=1.14.3=py37he30daa8_0
- chardet=3.0.4=py37_1003
- cryptography=3.1.1=py37h1ba5d50_0
- cudatoolkit=10.1.243=h6bb024c_0
- cycler=0.10.0=py37_0
- dbus=1.13.18=hb2f20db_0
- decorator=4.4.2=py_0
- defusedxml=0.6.0=py_0
- entrypoints=0.3=py37_0
- expat=2.2.10=he6710b0_2
- fast-histogram=0.9=py37heb32a55_0
- filelock=3.0.12=py_0
- fontconfig=2.13.1=hba837de_1005
- freetype=2.10.4=h5ab3b9f_0
- gdown=4.0.2=pyhd8ed1ab_0
- glib=2.56.2=hd408876_0
- gmp=6.1.2=hb3b607b_0
- grpcio=1.31.0=py37hf8bcb03_0
- gst-plugins-base=1.14.0=hbbd80ab_1
- gstreamer=1.14.0=hb453b48_1
- h5py=2.10.0=py37h7918eee_0
- hdf5=1.10.4=hb1b8bf9_0
- icu=58.2=he6710b0_3
- idna=2.10=py_0
- igraph=0.7.1=h2166141_1005
- importlib-metadata=2.0.0=py_1
- importlib_metadata=2.0.0=1
- intel-openmp=2020.2=254
- intervaltree=3.0.2=py_0
- ipykernel=5.3.4=py37h5ca1d4c_0
- ipython=7.18.1=py37h5ca1d4c_0
- ipython_genutils=0.2.0=py37_0
- ipywidgets=7.5.1=py_1
- jedi=0.17.2=py37_0
- jinja2=2.11.2=py_0
- joblib=0.17.0=py_0
- jpeg=9b=habf39ab_1
- jsonschema=3.2.0=py_2
- jupyter=1.0.0=py37h89c1867_7
- jupyter_client=6.1.7=py_0
- jupyter_console=6.2.0=py_0
- jupyter_core=4.6.3=py37_0
- jupyterlab_pygments=0.1.2=py_0
- kiwisolver=1.2.0=py37hfd86e86_0
- lcms2=2.11=h396b838_0
- ld_impl_linux-64=2.33.1=h53a641e_7
- leidenalg=0.7.0=py37h3340039_2
- libblas=3.8.0=17_openblas
- libcblas=3.8.0=17_openblas
- libedit=3.1.20191231=h14c3975_1
- libffi=3.3=he6710b0_2
- libgcc-ng=11.2.0=h1d223b6_11
- libgfortran-ng=7.3.0=hdf63c60_0
- libiconv=1.15=h63c8f33_5
- liblapack=3.8.0=17_openblas
- liblapacke=3.8.0=17_openblas
- libllvm10=10.0.1=hbcb73fb_5
- libopenblas=0.3.10=h5a2b251_0
- libpng=1.6.37=hbc83047_0
- libprotobuf=3.13.0.1=hd408876_0
- libsodium=1.0.18=h7b6447c_0
- libstdcxx-ng=11.2.0=he4da1e4_11
- libtiff=4.1.0=h2733197_1
- libuuid=2.32.1=h7f98852_1000
- libxcb=1.14=h7b6447c_0
- libxml2=2.9.10=hb55368b_3
- llvm-openmp=12.0.1=h4bd325d_1
- llvmlite=0.34.0=py37h269e1b5_4
- louvain=0.6.1=py37he1b5a44_2
- lz4-c=1.9.2=heb0550a_3
- lzo=2.10=h7b6447c_2
- markdown=3.3.2=py37_0
- markupsafe=1.1.1=py37h14c3975_1
- matplotlib=3.3.1=0
- matplotlib-base=3.3.1=py37h817c723_0
- mistune=0.8.4=py37h14c3975_1001
- mkl=2020.2=256
- mock=4.0.2=py_0
- mpl-scatter-density=0.7=py_0
- multicore-tsne=0.1_d4ff4aab=py37hda21425_1
- mysql-connector-c=6.1.11=h597af5e_1
- natsort=7.0.1=py_0
- nbclient=0.5.1=py_0
- nbconvert=6.0.7=py37_0
- nbformat=5.0.8=py_0
- ncurses=6.2=he6710b0_1
- nest-asyncio=1.4.1=py_0
- networkx=2.5=py_0
- ninja=1.10.1=py37hfd86e86_0
- notebook=6.1.4=py37_0
- numba=0.51.2=py37h04863e7_1
- numexpr=2.7.1=py37h7ea95a0_0
- numpy=1.17.5=py37haa41c4c_1
- olefile=0.46=py37_0
- openssl=1.1.1h=h7b6447c_0
- packaging=20.4=py_0
- pandas=0.25.3=py37he6710b0_0
- pandoc=2.11=hb0f4dca_0
- pandocfilters=1.4.2=py37_1
- parso=0.7.0=py_0
- patsy=0.5.1=py37_0
- pcre=8.44=he6710b0_0
- pexpect=4.8.0=py37_1
- pickleshare=0.7.5=py37_1001
- pillow=8.0.0=py37h9a89aac_0
- pip=20.2.4=py37_0
- pixman=0.40.0=h7b6447c_0
- prometheus_client=0.8.0=py_0
- prompt-toolkit=3.0.8=py_0
- prompt_toolkit=3.0.8=0
- protobuf=3.13.0.1=py37he6710b0_1
- ptyprocess=0.6.0=py37_0
- pycairo=1.19.1=py37h2a1e443_0
- pycparser=2.20=py_2
- pygments=2.7.1=py_0
- pyopenssl=19.1.0=py_1
- pyparsing=2.4.7=py_0
- pyqt=5.9.2=py37h22d08a2_1
- pyrsistent=0.17.3=py37h7b6447c_0
- pysocks=1.7.1=py37_1
- pytables=3.6.1=py37h71ec239_0
- python=3.7.9=h7579374_0
- python-dateutil=2.8.1=py_0
- python-igraph=0.7.1.post7=py37h516909a_0
- python_abi=3.7=2_cp37m
- pytorch=1.3.1=py3.7_cuda10.1.243_cudnn7.6.3_0
- pytz=2020.1=py_0
- pyzmq=19.0.2=py37he6710b0_1
- qt=5.9.7=h5867ecd_1
- qtconsole=4.7.7=py_0
- qtpy=1.9.0=py_0
- readline=8.0=h7b6447c_0
- requests=2.24.0=py_0
- scanpy=1.4.4.post1=py_0
- scikit-learn=0.21.3=py37h22eb022_0
- scipy=1.3.2=py37he2b7bc3_0
- seaborn=0.11.0=py_0
- send2trash=1.5.0=py37_0
- setuptools=50.3.0=py37hb0f4dca_1
- sip=4.19.24=py37he6710b0_0
- six=1.15.0=py_0
- skorch=0.7.0=pyh5ca1d4c_0
- snappy=1.1.8=he6710b0_0
- sortedcontainers=2.2.2=py_0
- sqlite=3.33.0=h62c20be_0
- statsmodels=0.10.1=py37hdd07704_0
- tabulate=0.8.7=py37_0
- tbb=2020.3=hfd86e86_0
- tensorboard=2.0.0=pyhb38c66f_1
- terminado=0.9.1=py37_0
- testpath=0.4.4=py_0
- tk=8.6.10=hbc83047_0
- torchvision=0.4.2=py37_cu101
- tornado=6.0.4=py37h7b6447c_1
- tqdm=4.50.2=py_0
- traitlets=5.0.5=py_0
- ucsc-liftover=357=h446ed27_4
- umap-learn=0.3.10=py37_1
- urllib3=1.25.11=py_0
- wcwidth=0.2.5=py_0
- webencodings=0.5.1=py37_1
- werkzeug=1.0.1=py_0
- wheel=0.35.1=py_0
- widgetsnbextension=3.5.1=py37_0
- xz=5.2.5=h7b6447c_0
- zeromq=4.3.3=he6710b0_3
- zipp=3.3.1=py_0
- zlib=1.2.11=h7b6447c_3
- zstd=1.4.4=h0b5b093_3
prefix: /home/wukevin/miniconda3/envs/babel