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get_blast2 removed from pypdb in version 2 #72

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reskyner opened this issue Jan 19, 2021 · 0 comments
Open

get_blast2 removed from pypdb in version 2 #72

reskyner opened this issue Jan 19, 2021 · 0 comments
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@reskyner
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We currently use pypdb version 1.300 in production (pipelines at Diamond), but the get_blast2 function appears to have been removed in the newest version of pypdb.

2 options:

  1. use exact versions in setup.py
  2. work out what's happened to the function and replace is appropriately (if there is a replacement)
reskyner added a commit that referenced this issue Jan 19, 2021
@reskyner
Delete pdbquery.py
05f21cc 
Issue #72 : hot fix until pypdb have propagated changes to the pdb api.
@reskyner reskyner mentioned this issue Jan 19, 2021
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@reskyner