README.rst

Napari Travali

Napari TRAck VALIdator

Features

• Enables manual validation of cell tracking results.

Installation

Currently at this early stage, you can install Napari Travali only fron GitHub You can install Napari Travali via G

$ pip install git+https://github.com/yfukai/napari-travali

Usage

Input data specification

<!-- Currently we accept segmented / tracked data in the following format.

• file format : zarr

• contents : - Dataset named image … 5-dim dataset with dimensional order TCZYX - Group named labels

  • Dataset named original … 4-dim dataset with dimensional order TZYX - attr named finalized_track_ids - attr named candidate_track_ids - attr named target_Ts
  • Dataset named df_tracks
  • Dataset named df_divisions

-->

Please see the Command-line Reference for details.

Contributing

Contributions are very welcome. To learn more, see the Contributor Guide.

License

Distributed under the terms of the MIT license, Napari Travali is free and open source software.

Issues

If you encounter any problems, please file an issue along with a detailed description.

Credits

This project was generated from @cjolowicz's Hypermodern Python Cookiecutter template.