feat: include snakemake profiles

[AngryMaciek]

Is your feature request related to a problem? Please describe.
Currently there are 5 top level bash scripts that run the workflow with different options.
This is not very flexible and not so elegant. 🤔

Describe the solution you'd like
Current setup is OK (it works!) but it would be even cooler if you could add snakemake profiles mechanism into your tool (so that others could also easily contribute with new profiles, ex. for different clusters). Also you could then have one "master" bash script (ex: run.sh) which starts SCUREL with a different profile depending on the command like arguments to this script.

Additional context

• We are already using profiles in the ZARP repo.
• If you wait 1 month with this then most probably MAPP repo will be public too and you could peek how I incorporated such solution there.