From 0c5270c6ec4620dc479f784fa08f13da36a72f99 Mon Sep 17 00:00:00 2001
From: zengzheng123 <zengzheng123@users.noreply.github.com>
Date: Wed, 24 May 2017 12:16:31 -0400
Subject: [PATCH] Update README.md

---
 README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/README.md b/README.md
index c153324..228ebdc 100644
--- a/README.md
+++ b/README.md
@@ -19,7 +19,7 @@ Run "make" in the program directory to compile
 --output                <string>        Output file
 
 [OPTIONAL ARGUMENTS]
-
+--omaf                                  Output the result in maf format
 --thread                <int>           Number of thread. Default 1
 --maq                   <int>           Mapping quality threshold. Default 20
 --baq                   <int>           Base quality threshold, Default 0