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possible fix for sid indexing problem #934

possible fix for sid indexing problem

possible fix for sid indexing problem #934

Workflow file for this run

# Build for dcicsnovault
name: CI
# Controls when the action will run.
on:
# Triggers the workflow on push or pull request events but only for the master branch
push:
branches: [ master ]
pull_request:
branches: [ master ]
# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:
# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
# This workflow contains a single job called "build"
build:
name: Test Suite for dcicsnovault
# The type of runner that the job will run on
runs-on: ubuntu-22.04
# Build matrix
strategy:
matrix:
python_version: [3.9, 3.11, 3.12]
test_type: ['UNIT', 'INDEXING']
# Steps represent a sequence of tasks that will be executed as part of the job
steps:
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
- uses: actions/checkout@v3
- uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python_version }}
- name: Install/Link Postgres
run: |
sudo apt-get install curl ca-certificates gnupg
curl https://www.postgresql.org/media/keys/ACCC4CF8.asc | sudo apt-key add -
sudo sh -c 'echo "deb http://apt.postgresql.org/pub/repos/apt $(lsb_release -cs)-pgdg main" > /etc/apt/sources.list.d/pgdg.list'
sudo apt-get update
sudo apt-get install postgresql-11 postgresql-client-11
echo "/usr/lib/postgresql/11/bin" >> $GITHUB_PATH
sudo ln -s /usr/lib/postgresql/11/bin/initdb /usr/local/bin/initdb
- name: Install Deps
run: |
make build-for-ga
- name: Configure AWS Credentials
uses: aws-actions/configure-aws-credentials@v1
with:
aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }}
aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
aws-region: us-east-1
- name: QA (INDEXING)
if: ${{ matrix.test_type == 'INDEXING' }}
env:
S3_ENCRYPT_KEY: ${{ secrets.S3_ENCRYPT_KEY }}
# # The need for this old environment variable name will go away soon.
# TRAVIS_JOB_ID: sno-x-test-${{ github.run_number }}-
# This will be the new environment variable name.
TEST_JOB_ID: sno-test-indexing-${{ github.run_number }}-${{ matrix.python_version }}-
run: |
make remote-test-indexing
- name: QA (UNIT)
if: ${{ matrix.test_type == 'UNIT' }}
env:
S3_ENCRYPT_KEY: ${{ secrets.S3_ENCRYPT_KEY }}
# # The need for this old environment variable name will go away soon.
# TRAVIS_JOB_ID: sno-x-test-${{ github.run_number }}-
# This will be the new environment variable name.
TEST_JOB_ID: sno-test-unit-${{ github.run_number }}-${{ matrix.python_version }}-
run: |
make remote-test-unit
- name: Cleanup (INDEXING)
if: ${{ always() && matrix.test_type == 'INDEXING' }}
env:
S3_ENCRYPT_KEY: ${{ secrets.S3_ENCRYPT_KEY }}
# The need for this old environment variable name will go away soon.
# TRAVIS_JOB_ID: sno-x-test-${{ github.run_number }}-
# This will be the new environment variable name.
TEST_JOB_ID: sno-test-indexing-${{ github.run_number }}-${{ matrix.python_version }}-
run: |
poetry run wipe-test-indices $TEST_JOB_ID search-fourfront-testing-opensearch-kqm7pliix4wgiu4druk2indorq.us-east-1.es.amazonaws.com:443
- name: Cleanup (UNIT)
if: ${{ always() && matrix.test_type == 'UNIT' }}
env:
S3_ENCRYPT_KEY: ${{ secrets.S3_ENCRYPT_KEY }}
# The need for this old environment variable name will go away soon.
# TRAVIS_JOB_ID: sno-x-test-${{ github.run_number }}-
# This will be the new environment variable name.
TEST_JOB_ID: sno-test-unit-${{ github.run_number }}-${{ matrix.python_version }}-
run: |
poetry run wipe-test-indices $TEST_JOB_ID search-fourfront-testing-opensearch-kqm7pliix4wgiu4druk2indorq.us-east-1.es.amazonaws.com:443