Esmvaltool

container/container.def

@@ -36,10 +36,5 @@ Bootstrap: scratch
         mkdir -p ${SINGULARITY_ROOTFS}/var/lib/sss
         mkdir -p ${SINGULARITY_ROOTFS}/var/run/munge
 
-        mkdir -p ${SINGULARITY_ROOTFS}/opt/conda/analysis3-22.07
-        mkdir -p ${SINGULARITY_ROOTFS}/opt/conda/analysis3-22.10
-        mkdir -p ${SINGULARITY_ROOTFS}/opt/conda/analysis3-23.01
-        mkdir -p ${SINGULARITY_ROOTFS}/opt/conda/analysis3-23.04
-
 %runscript
-        /usr/bin/bash -l
+        /usr/bin/bash -l

scripts/environment.yml

@@ -1,76 +1,5 @@
-name: med-condaenv
+name: med-esmvaltool
 channels:
 - conda-forge
-- accessnri
-variables:
-  CARTOPY_USER_BACKGROUNDS: /g/data/xp65/public/apps/cartopy-data/backgrounds
 dependencies:
-- apscheduler
-- fs
-- python>=3.9
-- libnetcdf>=4.7.4=mpi_openmpi* # pinned for solver stability
-- pip
-- pytest >=3.9,!=6.0.0rc1,!=6.0.0
-- pytest-cov
-- autopep8
-- cartopy
-- pyyaml
-- cdo>=1.9.5 # pinned for solver stability
-- matplotlib
-- jinja2
-- ilamb 2.7.*
-- dask
-- distributed
-- dask-labextension
-- panel
-- hvplot
-- datashader
-- iris>=3.1.0
-- iris-esmf-regrid
-- iris-grib
-- intake
-- access-nri-intake==0.0.9 # Keep pinned to latest version while in development
-- netcdf4<=1.6.0 ### Workaround for https://github.com/pydata/xarray/issues/7079
-- mo_pack
-- nodejs
-- numpy>=1.21, !=1.24.3  # severe masking bug
-- pandas
-- scipy
-- h5py
-- numba
 - esmvaltool 2.9.*
-- esmvaltool-python
-- esmvaltool-ncl
-- scikit-image
-- jupyter
-- notebook<6.5.3
-- jupyter_nbextensions_configurator
-- jupyter_contrib_nbextensions
-- jupyterlab
-- jsonschema>=4.18.1
-- jupyterlab_server
-- jupyter-server-proxy
-- jupyter-resource-usage
-- greenlet ### Dependency of... something?
-- objgraph ### Unlisted dependency of greenlet
-- asyncssh
-- gevent
-- openmpi
-- mpi4py
-- esmf>=8.0.1=mpi_openmpi*
-- esmpy>=8.0.1=mpi_openmpi*
-- pytest-json-report ### Needed for esmpy
-- xesmf >=0.7.1
-- xarray >=0.12.0
-- shapely
-- cf_xarray
-- sparse
-- coecms::ucx-py
-- xgboost >1.6.1  # github.com/ESMValGroup/ESMValTool/issues/2779
-- med-diagnostics==0.0.1 # pining for now
-- pip:
-  - railroad-diagrams ### Unlisted dependency of pip and pyparsing
-  - access-med-utils==0.1.6
-
-# Julia (dependencies installed by separate script)
-- julia

scripts/install_config.sh

@@ -1,13 +1,13 @@
 ### Settings to control installation path e.g. for test installs
 export CONDA_BASE="${CONDA_BASE:-/g/data/xp65/public}"
-export ADMIN_DIR="${ADMIN_DIR:-/g/data/xp65/admin/med_conda/admin}"
+export ADMIN_DIR="${ADMIN_DIR:-/g/data/xp65/admin/esmvaltool/admin}"
 export CONDA_TEMP_PATH="${PBS_JOBFS:-${CONDA_TEMP_PATH}}"
 export SCRIPT_DIR="${SCRIPT_DIR:-$PWD}"
 
-export SCRIPT_SUBDIR="apps/med_conda_scripts"
+export SCRIPT_SUBDIR="apps/esmvaltool_scripts"
 export MODULE_SUBDIR="modules"
 export APPS_SUBDIR="apps"
-export CONDA_INSTALL_BASENAME="med_conda"
+export CONDA_INSTALL_BASENAME="esmvaltool"
 export MODULE_NAME="conda"
 
 ### Derived locations - extra '.' for arcane rsync magic
@@ -21,10 +21,10 @@ export APPS_USERS_GROUP=xp65
 export APPS_OWNERS_GROUP=xp65_w
 
 ### Version settings
-export ENVIRONMENT=access-med
-export VERSION_TO_MODIFY=0.4
-export STABLE_VERSION=0.3
-export UNSTABLE_VERSION=0.4
+export ENVIRONMENT=esmvaltool
+export VERSION_TO_MODIFY=0.1
+export STABLE_VERSION=0.1
+export UNSTABLE_VERSION=0.2
 export FULLENV="${ENVIRONMENT}-${VERSION_TO_MODIFY}"
 
 ### Other settings