Fix RDataReporting::observables_likelihood (#2633) #11357
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Installation | |
| on: [push, pull_request, merge_group, workflow_dispatch] | |
| jobs: | |
| archive: | |
| name: Archive Install | |
| runs-on: ubuntu-22.04 | |
| strategy: | |
| matrix: | |
| python-version: ["3.11"] | |
| steps: | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: actions/checkout@v4 | |
| - run: git fetch --prune --unshallow | |
| - run: echo "AMICI_DIR=$(pwd)" >> $GITHUB_ENV | |
| - name: Install apt dependencies | |
| uses: ./.github/actions/install-apt-dependencies | |
| - name: apt | |
| run: | | |
| sudo apt-get update \ | |
| && sudo apt-get install -y \ | |
| cmake | |
| - name: Build suitesparse | |
| run: scripts/buildSuiteSparse.sh | |
| - name: Build sundials | |
| run: scripts/buildSundials.sh | |
| - name: Build AMICI | |
| run: scripts/buildAmici.sh | |
| - name: Install python archive | |
| run: scripts/installAmiciArchive.sh | |
| sdist_ubuntu: | |
| name: sdist Install Ubuntu | |
| runs-on: ubuntu-22.04 | |
| strategy: | |
| matrix: | |
| python-version: ["3.11"] | |
| steps: | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: actions/checkout@v4 | |
| - run: git fetch --prune --unshallow | |
| - run: echo "AMICI_DIR=$(pwd)" >> $GITHUB_ENV | |
| - name: Install apt dependencies | |
| uses: ./.github/actions/install-apt-dependencies | |
| - name: Create AMICI sdist | |
| run: scripts/buildSdist.sh | |
| - name: Install python sdist | |
| run: pip3 install -v --user $(ls -t python/sdist/dist/amici-*.tar.gz | head -1) | |
| - name: Test import | |
| run: python -m amici | |
| sdist_macos: | |
| name: sdist Install macos | |
| runs-on: macos-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.11"] | |
| steps: | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: actions/checkout@v4 | |
| - run: git fetch --prune --unshallow | |
| - run: echo "AMICI_DIR=$(pwd)" >> $GITHUB_ENV | |
| - name: Install dependencies | |
| uses: ./.github/actions/install-macos-dependencies | |
| - name: Create AMICI sdist | |
| run: scripts/buildSdist.sh | |
| - name: Install python sdist | |
| run: pip3 install -v --user $(ls -t python/sdist/dist/amici-*.tar.gz | head -1) | |
| - name: Test import | |
| run: python -m amici |