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dweindl committed Dec 10, 2024
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42 changes: 42 additions & 0 deletions CHANGELOG.md
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## v0.X Series

### v0.30.0 (2024-12-10)

*Please note that the amici JAX model generation introduced in v0.29.0 is
experimental, the API may substantially change in the future.
Use at your own risk and do not expect backward compatibility.*

**Features**

* Added serialisation for JAX models

by @FFroehlich in https://github.com/AMICI-dev/AMICI/pull/2608

* Disabled building the C++ extension by default when generating a JAX model

by @FFroehlich in https://github.com/AMICI-dev/AMICI/pull/2609

* Separate pre-equilibration and dynamic simulation in jax

by @FFroehlich in https://github.com/AMICI-dev/AMICI/pull/2617

* State reinitialisation in JAX

by @FFroehlich in https://github.com/AMICI-dev/AMICI/pull/2619

**Fixes**

* Fixed ModelStateDerived copy ctor (fixes potential segfaults)

by @dweindl in https://github.com/AMICI-dev/AMICI/pull/2612

* PEtab parameter mapping: fill in fixed parameter values for initial values

by @dweindl in https://github.com/AMICI-dev/AMICI/pull/2613

* `nan`-safe log&divide for JAX models

by @FFroehlich in https://github.com/AMICI-dev/AMICI/pull/2611


**Full Changelog**: https://github.com/AMICI-dev/AMICI/compare/v0.29.0...v0.30.0


### v0.29.0 (2024-11-28)

**Fixes**
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0.29.0
0.30.0

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