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Release 0.26.3#2525

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dweindl merged 20 commits intoAMICI-dev:masterAMICI-dev/AMICI:masterfrom dweindl:release_0.26.3dweindl/AMICI:release_0.26.3Copy head branch name to clipboardOct 3, 2024

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Commits on Sep 26, 2024

• Simplify SuiteSparse installation (AMICI-dev#2501)

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• ReturnData: remove protected data members (AMICI-dev#2503)

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• Update .gitignore

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• Refactor: Move spl_ from ModelState to ModelStateDerived (AMICI-dev#2505)

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• Refactor Model::steadystate_mask_ (AMICI-dev#2506)

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Commits on Sep 27, 2024

• Refactor ModelDimension and initialization of ModelStateDerived (AMICI-dev#2507)

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• Require CMake>=3.22 (AMICI-dev#2508)

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• Fix up SuiteSparse upgrade (AMICI-dev#2514)

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Commits on Sep 29, 2024

• Remove unneeded SuiteSparse files

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Commits on Sep 30, 2024

• Get rid of petab DeprecationWarnings (AMICI-dev#2517)

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• CMake: restrict visibility of private headers (AMICI-dev#2516)

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• Everything in debug mode with ENABLE_AMICI_DEBUGGING=TRUE (AMICI-dev#2515)

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• CI: Install petab for benchmark_model_petab when

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Commits on Oct 1, 2024

• Build SuiteSparse as a single extension (AMICI-dev#2519)

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• GHA: Install benchmark collection only where necessary (AMICI-dev#2522)

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• Refactor SUNLinSolWrapper (AMICI-dev#2520)

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Commits on Oct 2, 2024

• Benchmark model tests: fix gradients checks

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Commits on Oct 3, 2024

• Doc: demonstrate plotting measurements (AMICI-dev#2523)

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• Refactor NewtonSolver (AMICI-dev#2521)

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• Update release notes, bump version

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