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AMICI v0.25.0
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@dweindl dweindl released this 08 May 13:48
· 159 commits to master since this release
v0.25.0
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This release requires Python >= 3.10.

Fixes

  • Fixed a bug in event handling that could lead to incorrect simulation
    results for models with events that assign to compartments and have
    additional event assignments
    by @dweindl in #2428
  • SBML import: handle useValuesFromTriggerTime attribute on events.
    This attribute was previously ignored. It is possible that now AMICI fails
    to import models that it previously imported successfully. For cases where
    useValuesFromTriggerTime=True made a difference, AMICI might have produced
    incorrect results before.
    by @dweindl in #2429
  • Faster code generation for models with events if they don't have
    state-dependent triggers
    by @dweindl in #2417
  • Most warnings now come with a more informative code location
    by @dweindl in #2421
  • amici.ExpData was changed so that isinstance(edata, amici.ExpData) works
    by @dweindl in #2396

Features

  • Event-assignments to compartments are now supported. Previously, this only
    worked for compartments that were rate rule targets.
    by @dweindl in #2425
  • Releases are now deployed to Docker Hub
    by @dweindl in #2413

Full Changelog: v0.24.0...v0.25.0

Contributors

dweindl
Assets 2
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