Renumber the screening methods so null is at index 0 #113
Workflow file for this run
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| name: test_rhs | |
| on: [pull_request] | |
| jobs: | |
| test_rhs: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Get AMReX | |
| run: | | |
| mkdir external | |
| cd external | |
| git clone https://github.com/AMReX-Codes/amrex.git | |
| cd amrex | |
| git checkout development | |
| echo 'AMREX_HOME=$(GITHUB_WORKSPACE)/external/amrex' >> $GITHUB_ENV | |
| echo $AMREX_HOME | |
| if [[ -n "${AMREX_HOME}" ]]; then exit 1; fi | |
| cd ../.. | |
| - name: Install dependencies | |
| run: | | |
| sudo apt-get update -y -qq | |
| sudo apt-get -qq -y install curl cmake jq clang g++>=9.3.0 | |
| - name: Build the fextrema tool | |
| run: | | |
| cd external/amrex/Tools/Plotfile | |
| make programs=fextrema -j 2 | |
| - name: Compile, test_rhs (VODE, ignition_simple) | |
| run: | | |
| cd unit_test/test_rhs | |
| make realclean | |
| make NETWORK_DIR=ignition_simple -j 4 | |
| - name: Run test_rhs (VODE, ignition_simple) | |
| run: | | |
| cd unit_test/test_rhs | |
| ./main3d.gnu.ex inputs_ignition_simple | |
| ../../external/amrex/Tools/Plotfile/fextrema.gnu.ex react_ignition_simple_test_rhs.VODE > test.out | |
| - name: Compare to stored output (VODE, ignition_simple) | |
| run: | | |
| cd unit_test/test_rhs | |
| diff test.out ci-benchmarks/ignition_simple.out | |
| - name: Compile, test_rhs (VODE, ignition_chamulak) | |
| run: | | |
| cd unit_test/test_rhs | |
| make realclean | |
| make NETWORK_DIR=ignition_chamulak -j 4 | |
| - name: Run test_rhs (VODE, ignition_chamulak) | |
| run: | | |
| cd unit_test/test_rhs | |
| ./main3d.gnu.ex inputs_chamulak | |
| ../../external/amrex/Tools/Plotfile/fextrema.gnu.ex react_chamulak_test_rhs.VODE > test.out | |
| - name: Compare to stored output (VODE, ignition_chamulak) | |
| run: | | |
| cd unit_test/test_rhs | |
| diff test.out ci-benchmarks/chamulak.out | |
| - name: Compile, test_rhs (VODE, iso7) | |
| run: | | |
| cd unit_test/test_rhs | |
| make realclean | |
| make NETWORK_DIR=iso7 -j 4 | |
| - name: Run test_rhs (VODE, iso7) | |
| run: | | |
| cd unit_test/test_rhs | |
| ./main3d.gnu.ex inputs_iso7 | |
| ../../external/amrex/Tools/Plotfile/fextrema.gnu.ex react_iso7_test_rhs.VODE > test.out | |
| - name: Compare to stored output (VODE, iso7) | |
| run: | | |
| cd unit_test/test_rhs | |
| diff test.out ci-benchmarks/iso7.out | |
| - name: Compile, test_rhs (VODE, aprox13) | |
| run: | | |
| cd unit_test/test_rhs | |
| make realclean | |
| make NETWORK_DIR=aprox13 -j 4 | |
| - name: Run test_rhs (VODE, aprox13) | |
| run: | | |
| cd unit_test/test_rhs | |
| ./main3d.gnu.ex inputs_aprox13 | |
| ../../external/amrex/Tools/Plotfile/fextrema.gnu.ex react_aprox13_test_rhs.VODE > test.out | |
| - name: Compare to stored output (VODE, aprox13) | |
| run: | | |
| cd unit_test/test_rhs | |
| diff test.out ci-benchmarks/aprox13.out | |
| - name: Compile, test_rhs (VODE, aprox19) | |
| run: | | |
| cd unit_test/test_rhs | |
| make realclean | |
| make NETWORK_DIR=aprox19 -j 4 | |
| - name: Run test_rhs (VODE, aprox19) | |
| run: | | |
| cd unit_test/test_rhs | |
| ./main3d.gnu.ex inputs_aprox19 | |
| ../../external/amrex/Tools/Plotfile/fextrema.gnu.ex react_aprox19_test_rhs.VODE > test.out | |
| - name: Compare to stored output (VODE, aprox19) | |
| run: | | |
| cd unit_test/test_rhs | |
| diff test.out ci-benchmarks/aprox19.out | |
| - name: Compile, test_rhs (VODE, aprox21) | |
| run: | | |
| cd unit_test/test_rhs | |
| make realclean | |
| make NETWORK_DIR=aprox21 -j 4 | |
| - name: Run test_rhs (VODE, aprox21) | |
| run: | | |
| cd unit_test/test_rhs | |
| ./main3d.gnu.ex inputs_aprox21 | |
| ../../external/amrex/Tools/Plotfile/fextrema.gnu.ex react_aprox21_test_rhs.VODE > test.out | |
| - name: Compare to stored output (VODE, aprox21) | |
| run: | | |
| cd unit_test/test_rhs | |
| diff test.out ci-benchmarks/aprox21.out | |
| - name: Compile, test_rhs (VODE, rprox) | |
| run: | | |
| cd unit_test/test_rhs | |
| make realclean | |
| make NETWORK_DIR=rprox -j 4 | |
| - name: Run test_rhs (VODE, rprox) | |
| run: | | |
| cd unit_test/test_rhs | |
| ./main3d.gnu.ex inputs_rprox | |
| ../../external/amrex/Tools/Plotfile/fextrema.gnu.ex react_rprox_test_rhs.VODE > test.out | |
| - name: Compare to stored output (VODE, rprox) | |
| run: | | |
| cd unit_test/test_rhs | |
| diff test.out ci-benchmarks/rprox.out | |
| - name: Compile, test_rhs (VODE, powerlaw) | |
| run: | | |
| cd unit_test/test_rhs | |
| make realclean | |
| make NETWORK_DIR=powerlaw -j 4 | |
| - name: Run test_rhs (VODE, powerlaw) | |
| run: | | |
| cd unit_test/test_rhs | |
| ./main3d.gnu.ex inputs_powerlaw | |
| ../../external/amrex/Tools/Plotfile/fextrema.gnu.ex react_powerlaw_test_rhs.VODE > test.out | |
| - name: Compare to stored output (VODE, powerlaw) | |
| run: | | |
| cd unit_test/test_rhs | |
| diff test.out ci-benchmarks/powerlaw.out | |
| - name: Compile, test_rhs (VODE, triple_alpha_plus_cago) | |
| run: | | |
| cd unit_test/test_rhs | |
| make realclean | |
| make NETWORK_DIR=triple_alpha_plus_cago -j 4 | |
| - name: Run test_rhs (VODE, triple_alpha_plus_cago) | |
| run: | | |
| cd unit_test/test_rhs | |
| ./main3d.gnu.ex inputs_triple_alpha_plus_cago | |
| ../../external/amrex/Tools/Plotfile/fextrema.gnu.ex react_triple_alpha_plus_cago_test_rhs.VODE > test.out | |
| - name: Compare to stored output (VODE, triple_alpha_plus_cago) | |
| run: | | |
| cd unit_test/test_rhs | |
| diff test.out ci-benchmarks/triple_alpha_plus_cago.out |