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Piyush Sharda authored and Piyush Sharda committed Aug 27, 2024
1 parent b86f994 commit c1e6e5a
Showing 1 changed file with 62 additions and 295 deletions.
357 changes: 62 additions & 295 deletions .github/workflows/burn_cell_metal_chem.yml
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Expand Up @@ -28,308 +28,75 @@ jobs:
sudo apt-get update -y -qq
sudo apt-get -qq -y install curl cmake jq clang g++>=9.3.0
- name: Compile and run for Z = 1
run: |
cd unit_test/burn_cell_metal_chem
make -j 2
./main1d.gnu.DEBUG.ex inputs_metal_chem_1 amrex.fpe_trap_{invalid,zero,overflow}=1 > test.out
- name: Print backtrace
if: ${{ failure() && hashFiles('unit_test/burn_cell_metal_chem/Backtrace.0') != '' }}
run: cat unit_test/burn_cell_metal_chem/Backtrace.0

- name: Compare to stored output for Z = 1
run: |
set -e
cd unit_test/burn_cell_metal_chem
line_numbers=(4461 4463 4465 4467 4468 4471 4472 4475 4481 4486)
threshold=0.01
error_found=false
for line_number in "${line_numbers[@]}"; do
value1=$(awk 'NR=='"$line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH); else print 0}' test.out)
# Adjust the line number for reference_solution_1.out
reference_line_number=$((line_number - 4460))
value2=$(awk 'NR=='"$reference_line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH)}' reference_solution_1.out)
difference=$(awk -v val1="$value1" -v val2="$value2" 'BEGIN { printf "%.2f", (val1 - val2) / val2 }')
if (( $(echo "$difference > $threshold" | bc -l) )); then
echo "Line number: $line_number"
echo "Value in test.out: $value1"
echo "Value in reference_solution_1.out: $value2"
echo "Difference between test and reference value is $difference, more than allowed threshold of $threshold"
echo
error_found=true
fi
done
if [[ $error_found == true ]]; then
exit 1
fi
- name: Run for Z = 1 at z = 10
run: |
cd unit_test/burn_cell_metal_chem
./main1d.gnu.DEBUG.ex inputs_metal_chem_1_z10 amrex.fpe_trap_{invalid,zero,overflow}=1 > test.out
- name: Print backtrace
if: ${{ failure() && hashFiles('unit_test/burn_cell_metal_chem/Backtrace.0') != '' }}
run: cat unit_test/burn_cell_metal_chem/Backtrace.0

- name: Compare to stored output for Z = 1 at z = 10
run: |
set -e
cd unit_test/burn_cell_metal_chem
line_numbers=(1613 1615 4456 4458 4460 4463 4470 4476 4481)
threshold=0.01
error_found=false
for line_number in "${line_numbers[@]}"; do
value1=$(awk 'NR=='"$line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH); else print 0}' test.out)
# Adjust the line number for reference_solution_1_z10.out
reference_line_number=$((line_number - 1612))
value2=$(awk 'NR=='"$reference_line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH)}' reference_solution_1_z10.out)
difference=$(awk -v val1="$value1" -v val2="$value2" 'BEGIN { printf "%.2f", (val1 - val2) / val2 }')
if (( $(echo "$difference > $threshold" | bc -l) )); then
echo "Line number: $line_number"
echo "Value in test.out: $value1"
echo "Value in reference_solution_1_z10.out: $value2"
echo "Difference between test and reference value is $difference, more than allowed threshold of $threshold"
echo
error_found=true
fi
done
if [[ $error_found == true ]]; then
exit 1
fi
- name: Run for Z = 1e-1
run: |
cd unit_test/burn_cell_metal_chem
./main1d.gnu.DEBUG.ex inputs_metal_chem_1e-1 amrex.fpe_trap_{invalid,zero,overflow}=1 > test.out
- name: Print backtrace
if: ${{ failure() && hashFiles('unit_test/burn_cell_metal_chem/Backtrace.0') != '' }}
run: cat unit_test/burn_cell_metal_chem/Backtrace.0

- name: Compare to stored output for Z = 1e-1
run: |
set -e
cd unit_test/burn_cell_metal_chem
line_numbers=(4438 4440 4442 4444 4445 4448 4449 4452 4458 4463)
threshold=0.01
error_found=false
for line_number in "${line_numbers[@]}"; do
value1=$(awk 'NR=='"$line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH); else print 0}' test.out)
# Adjust the line number for reference_solution
reference_line_number=$((line_number - 4437))
value2=$(awk 'NR=='"$reference_line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH)}' reference_solution_1e-1.out)
difference=$(awk -v val1="$value1" -v val2="$value2" 'BEGIN { printf "%.2f", (val1 - val2) / val2 }')
if (( $(echo "$difference > $threshold" | bc -l) )); then
echo "Line number: $line_number"
echo "Value in test.out: $value1"
echo "Value in reference_solution_1e-1.out: $value2"
echo "Difference between test and reference value is $difference, more than allowed threshold of $threshold"
echo
error_found=true
fi
done
if [[ $error_found == true ]]; then
exit 1
fi
- name: Run for Z = 1e-2
run: |
cd unit_test/burn_cell_metal_chem
./main1d.gnu.DEBUG.ex inputs_metal_chem_1e-2 amrex.fpe_trap_{invalid,zero,overflow}=1 > test.out
- name: Print backtrace
if: ${{ failure() && hashFiles('unit_test/burn_cell_metal_chem/Backtrace.0') != '' }}
run: cat unit_test/burn_cell_metal_chem/Backtrace.0

- name: Compare to stored output for Z = 1e-2
run: |
set -e
cd unit_test/burn_cell_metal_chem
line_numbers=(4438 4440 4442 4444 4445 4448 4449 4452 4458 4463)
threshold=0.01
error_found=false
for line_number in "${line_numbers[@]}"; do
value1=$(awk 'NR=='"$line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH); else print 0}' test.out)
# Adjust the line number for reference_solution
reference_line_number=$((line_number - 4437))
value2=$(awk 'NR=='"$reference_line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH)}' reference_solution_1e-2.out)
difference=$(awk -v val1="$value1" -v val2="$value2" 'BEGIN { printf "%.2f", (val1 - val2) / val2 }')
if (( $(echo "$difference > $threshold" | bc -l) )); then
echo "Line number: $line_number"
echo "Value in test.out: $value1"
echo "Value in reference_solution_1e-2.out: $value2"
echo "Difference between test and reference value is $difference, more than allowed threshold of $threshold"
echo
error_found=true
fi
done
if [[ $error_found == true ]]; then
exit 1
fi
- name: Run for Z = 1e-3
run: |
cd unit_test/burn_cell_metal_chem
./main1d.gnu.DEBUG.ex inputs_metal_chem_1e-3 amrex.fpe_trap_{invalid,zero,overflow}=1 > test.out
- name: Print backtrace
if: ${{ failure() && hashFiles('unit_test/burn_cell_metal_chem/Backtrace.0') != '' }}
run: cat unit_test/burn_cell_metal_chem/Backtrace.0

- name: Compare to stored output for Z = 1e-3
- name: Run and compare outputs for different Z values
run: |
set -e
cd unit_test/burn_cell_metal_chem
line_numbers=(4438 4440 4442 4444 4445 4448 4449 4452 4458 4463)
threshold=0.01
error_found=false
for line_number in "${line_numbers[@]}"; do
value1=$(awk 'NR=='"$line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH); else print 0}' test.out)
# Adjust the line number for reference_solution
reference_line_number=$((line_number - 4437))
value2=$(awk 'NR=='"$reference_line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH)}' reference_solution_1e-3.out)
difference=$(awk -v val1="$value1" -v val2="$value2" 'BEGIN { printf "%.2f", (val1 - val2) / val2 }')
if (( $(echo "$difference > $threshold" | bc -l) )); then
echo "Line number: $line_number"
echo "Value in test.out: $value1"
echo "Value in reference_solution_1e-3.out: $value2"
echo "Difference between test and reference value is $difference, more than allowed threshold of $threshold"
echo
error_found=true
declare -A line_numbers_map=(
["Z=1"]="4461 4463 4465 4467 4468 4471 4472 4475 4481 4486"
["Z=1_z10"]="1613 1615 4456 4458 4460 4463 4470 4476 4481"
["Z=1e-1"]="4438 4440 4442 4444 4445 4448 4449 4452 4458 4463"
["Z=1e-2"]="4438 4440 4442 4444 4445 4448 4449 4452 4458 4463"
["Z=1e-3"]="4438 4440 4442 4444 4445 4448 4449 4452 4458 4463"
["Z=1e-4"]="4438 4440 4442 4444 4445 4448 4449 4452 4458 4463"
["Z=1e-5"]="4438 4440 4442 4444 4445 4448 4449 4452 4458 4463"
["Z=1e-6"]="4438 4440 4442 4444 4445 4448 4449 4452 4458 4463"
)
declare -A ref_map=(
["Z=1"]="reference_solution_1.out"
["Z=1_z10"]="reference_solution_1_z10.out"
["Z=1e-1"]="reference_solution_1e-1.out"
["Z=1e-2"]="reference_solution_1e-2.out"
["Z=1e-3"]="reference_solution_1e-3.out"
["Z=1e-4"]="reference_solution_1e-4.out"
["Z=1e-5"]="reference_solution_1e-5.out"
["Z=1e-6"]="reference_solution_1e-6.out"
)
for Z in "Z=1" "Z=1_z10" "Z=1e-1" "Z=1e-2" "Z=1e-3" "Z=1e-4" "Z=1e-5" "Z=1e-6"; do
input_file="inputs_metal_chem_${Z//Z=/}"
output_file="test_${Z//Z=/}.out"
./main1d.gnu.DEBUG.ex $input_file amrex.fpe_trap_{invalid,zero,overflow}=1 > $output_file
line_numbers="${line_numbers_map[$Z]}"
ref_file="${ref_map[$Z]}"
error_found=false
for line_number in $line_numbers; do
value1=$(awk 'NR=='"$line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH); else print 0}' $output_file)
# Adjust the line number for the reference file
if [[ "$Z" == "Z=1" ]]; then
reference_line_number=$((line_number - 4460))
elif [[ "$Z" == "Z=1_z10" ]]; then
reference_line_number=$((line_number - 1612))
else
reference_line_number=$((line_number - 4437))
fi
value2=$(awk 'NR=='"$reference_line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH)}' $ref_file)
difference=$(awk -v val1="$value1" -v val2="$value2" 'BEGIN { printf "%.2f", (val1 - val2) / val2 }')
if (( $(echo "$difference > 0.01" | bc -l) )); then
echo "Z: $Z"
echo "Line number: $line_number"
echo "Value in $output_file: $value1"
echo "Value in $ref_file: $value2"
echo "Difference between test and reference value is $difference, more than allowed threshold of 0.01"
echo
error_found=true
fi
done
if [[ $error_found == true ]]; then
exit 1
fi
done
if [[ $error_found == true ]]; then
exit 1
fi
- name: Run for Z = 1e-4
run: |
cd unit_test/burn_cell_metal_chem
./main1d.gnu.DEBUG.ex inputs_metal_chem_1e-4 amrex.fpe_trap_{invalid,zero,overflow}=1 > test.out
- name: Print backtrace
- name: Print backtrace if any failure
if: ${{ failure() && hashFiles('unit_test/burn_cell_metal_chem/Backtrace.0') != '' }}
run: cat unit_test/burn_cell_metal_chem/Backtrace.0

- name: Compare to stored output for Z = 1e-4
run: |
set -e
cd unit_test/burn_cell_metal_chem
line_numbers=(4438 4440 4442 4444 4445 4448 4449 4452 4458 4463)
threshold=0.01
error_found=false
for line_number in "${line_numbers[@]}"; do
value1=$(awk 'NR=='"$line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH); else print 0}' test.out)
# Adjust the line number for reference_solution
reference_line_number=$((line_number - 4437))
value2=$(awk 'NR=='"$reference_line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH)}' reference_solution_1e-4.out)
difference=$(awk -v val1="$value1" -v val2="$value2" 'BEGIN { printf "%.2f", (val1 - val2) / val2 }')
if (( $(echo "$difference > $threshold" | bc -l) )); then
echo "Line number: $line_number"
echo "Value in test.out: $value1"
echo "Value in reference_solution_1e-4.out: $value2"
echo "Difference between test and reference value is $difference, more than allowed threshold of $threshold"
echo
error_found=true
fi
done
if [[ $error_found == true ]]; then
exit 1
fi
- name: Run for Z = 1e-5
run: |
cd unit_test/burn_cell_metal_chem
./main1d.gnu.DEBUG.ex inputs_metal_chem_1e-5 amrex.fpe_trap_{invalid,zero,overflow}=1 > test.out
- name: Print backtrace
if: ${{ failure() && hashFiles('unit_test/burn_cell_metal_chem/Backtrace.0') != '' }}
run: cat unit_test/burn_cell_metal_chem/Backtrace.0

- name: Compare to stored output for Z = 1e-5
run: |
set -e
cd unit_test/burn_cell_metal_chem
line_numbers=(4438 4440 4442 4444 4445 4448 4449 4452 4458 4463)
threshold=0.01
error_found=false
for line_number in "${line_numbers[@]}"; do
value1=$(awk 'NR=='"$line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH); else print 0}' test.out)
# Adjust the line number for reference_solution
reference_line_number=$((line_number - 4437))
value2=$(awk 'NR=='"$reference_line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH)}' reference_solution_1e-5.out)
difference=$(awk -v val1="$value1" -v val2="$value2" 'BEGIN { printf "%.2f", (val1 - val2) / val2 }')
if (( $(echo "$difference > $threshold" | bc -l) )); then
echo "Line number: $line_number"
echo "Value in test.out: $value1"
echo "Value in reference_solution_1e-5.out: $value2"
echo "Difference between test and reference value is $difference, more than allowed threshold of $threshold"
echo
error_found=true
fi
done
if [[ $error_found == true ]]; then
exit 1
fi
- name: Run for Z = 1e-6
run: |
cd unit_test/burn_cell_metal_chem
./main1d.gnu.DEBUG.ex inputs_metal_chem_1e-6 amrex.fpe_trap_{invalid,zero,overflow}=1 > test.out
- name: Print backtrace
if: ${{ failure() && hashFiles('unit_test/burn_cell_metal_chem/Backtrace.0') != '' }}
run: cat unit_test/burn_cell_metal_chem/Backtrace.0

- name: Compare to stored output for Z = 1e-6
run: |
set -e
cd unit_test/burn_cell_metal_chem
line_numbers=(4438 4440 4442 4444 4445 4448 4449 4452 4458 4463)
threshold=0.01
error_found=false
for line_number in "${line_numbers[@]}"; do
value1=$(awk 'NR=='"$line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH); else print 0}' test.out)
# Adjust the line number for reference_solution
reference_line_number=$((line_number - 4437))
value2=$(awk 'NR=='"$reference_line_number"' {match($0, /[+-]?[0-9]+([.][0-9]+)?[eE]?[+-]?[0-9]+/); if (RSTART) print substr($0, RSTART, RLENGTH)}' reference_solution_1e-6.out)
difference=$(awk -v val1="$value1" -v val2="$value2" 'BEGIN { printf "%.2f", (val1 - val2) / val2 }')
if (( $(echo "$difference > $threshold" | bc -l) )); then
echo "Line number: $line_number"
echo "Value in test.out: $value1"
echo "Value in reference_solution_1e-6.out: $value2"
echo "Difference between test and reference value is $difference, more than allowed threshold of $threshold"
echo
error_found=true
fi
done
if [[ $error_found == true ]]; then
exit 1
fi

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