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Readme and updates to makefile for SUNDIALS #496

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Readme and updates to makefile for SUNDIALS

Readme and updates to makefile for SUNDIALS #496

Workflow file for this run

.github/workflows/linux.yml at e60fb75
name: linux
on: [push, pull_request]
jobs:
# Build all tutorials
tutorials_build:
name: [email protected] C++14 [tutorials]
runs-on: ubuntu-20.04
env: {CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code -fno-operator-names"}
steps:
- uses: actions/checkout@v4
- name: Dependencies
run: .github/workflows/dependencies/dependencies.sh
- name: Build & Install
run: |
cd ExampleCodes
cmake -S . -B build \
-DCMAKE_BUILD_TYPE=Debug \
-DCMAKE_VERBOSE_MAKEFILE=ON \
-DAMReX_LINEAR_SOLVERS=ON \
-DAMReX_FORTRAN=ON \
-DAMReX_FORTRAN_INTERFACES=ON \
-DAMReX_EB=ON \
-DAMReX_PARTICLES=ON \
-DTUTORIAL_PYTHON=ON
cmake --build build -j 2
cmake --build build -j 2 --target pyamrex_pip_install
- name: Run Python
run: |
cd GuidedTutorials/MultiFab/
python main.py
cd ../HeatEquation/Source/
python main.py
# Build all tutorials
tutorials_cxx20:
name: [email protected] C++20 OMP [tutorials]
runs-on: ubuntu-20.04
env: {CXXFLAGS: "-Werror -Wno-error=deprecated-declarations -Wshadow -Woverloaded-virtual -Wunreachable-code -fno-operator-names"}
steps:
- uses: actions/checkout@v4
- name: Dependencies
run: .github/workflows/dependencies/dependencies_gcc10.sh
- name: Build & Install
run: |
cd ExampleCodes
cmake -S . -B build \
-DCMAKE_BUILD_TYPE=Debug \
-DCMAKE_VERBOSE_MAKEFILE=ON \
-DAMReX_OMP=ON \
-DAMReX_PARTICLES=ON \
-DAMReX_LINEAR_SOLVERS=ON \
-DAMReX_FORTRAN=ON \
-DAMReX_FORTRAN_INTERFACES=ON \
-DAMReX_EB=ON \
-DTUTORIAL_PYTHON=ON \
-DCMAKE_CXX_STANDARD=20 \
-DCMAKE_C_COMPILER=$(which gcc-10) \
-DCMAKE_CXX_COMPILER=$(which g++-10) \
-DCMAKE_Fortran_COMPILER=$(which mpif90)
cmake --build build -j 2
cmake --build build -j 2 --target pyamrex_pip_install
- name: Run Python
run: |
cd GuidedTutorials/MultiFab/
python main.py
cd ../HeatEquation/Source/
python main.py
tutorials_clang:
name: [email protected] C++14 SP Particles DP Mesh Debug [tutorials]
runs-on: ubuntu-20.04
env: {CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wextra-semi -Wunreachable-code -fno-operator-names"}
steps:
- uses: actions/checkout@v4
- name: Dependencies
run: .github/workflows/dependencies/dependencies_clang6.sh
- name: Build & Install
run: |
cd ExampleCodes
cmake -S . -B build \
-DCMAKE_BUILD_TYPE=Debug \
-DCMAKE_VERBOSE_MAKEFILE=ON \
-DAMReX_MPI=OFF \
-DAMReX_PARTICLES=ON \
-DAMReX_LINEAR_SOLVERS=ON \
-DAMReX_FORTRAN=ON \
-DAMReX_FORTRAN_INTERFACES=ON \
-DAMReX_EB=ON \
-DAMReX_PRECISION=DOUBLE \
-DAMReX_PARTICLES_PRECISION=SINGLE \
-DTUTORIAL_PYTHON=ON \
-DCMAKE_CXX_STANDARD=14 \
-DCMAKE_C_COMPILER=$(which clang) \
-DCMAKE_CXX_COMPILER=$(which clang++) \
-DCMAKE_Fortran_COMPILER=$(which gfortran)
cmake --build build -j 2
cmake --build build -j 2 --target pyamrex_pip_install
- name: Run Python
run: |
cd GuidedTutorials/MultiFab/
python main.py
cd ../HeatEquation/Source/
python main.py
# Build all tutorials w/o MPI
tutorials-nonmpi:
name: [email protected] C++14 NOMPI [tutorials]
runs-on: ubuntu-20.04
env: {CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code -fno-operator-names"}
steps:
- uses: actions/checkout@v4
- name: Dependencies
run: .github/workflows/dependencies/dependencies.sh
- name: Build & Install
run: |
cd ExampleCodes
cmake -S . -B build \
-DCMAKE_BUILD_TYPE=Debug \
-DCMAKE_VERBOSE_MAKEFILE=ON \
-DAMReX_MPI=OFF \
-DAMReX_LINEAR_SOLVERS=ON \
-DAMReX_FORTRAN=ON \
-DAMReX_FORTRAN_INTERFACES=ON \
-DAMReX_EB=ON \
-DAMReX_PARTICLES=ON \
-DTUTORIAL_PYTHON=ON
cmake --build build -j 2
cmake --build build -j 2 --target pyamrex_pip_install
- name: Run Python
run: |
cd GuidedTutorials/MultiFab/
python main.py
cd ../HeatEquation/Source/
python main.py
# Build all tutorials
tutorials-nofortran:
name: [email protected] C++14 w/o Fortran [tutorials]
runs-on: ubuntu-20.04
env: {CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code -fno-operator-names"}
steps:
- uses: actions/checkout@v4
- name: Dependencies
run: .github/workflows/dependencies/dependencies_nofortran.sh
- name: Build & Install
run: |
cd ExampleCodes
cmake -S . -B build \
-DCMAKE_BUILD_TYPE=Debug \
-DCMAKE_VERBOSE_MAKEFILE=ON \
-DAMReX_LINEAR_SOLVERS=ON \
-DAMReX_EB=ON \
-DAMReX_PARTICLES=ON \
-DAMReX_FORTRAN=OFF \
-DTUTORIAL_PYTHON=ON
cmake --build build -j 2
cmake --build build -j 2 --target pyamrex_pip_install
- name: Run Python
run: |
cd GuidedTutorials/MultiFab/
python main.py
cd ../HeatEquation/Source/
python main.py
# Build all tutorials with CUDA 11.0.2 (recent supported)
tutorials-cuda11:
name: [email protected] [email protected] C++17 Release [tutorials]
runs-on: ubuntu-20.04
env: {CXXFLAGS: "-fno-operator-names"}
steps:
- uses: actions/checkout@v4
- name: Dependencies
run: .github/workflows/dependencies/dependencies_nvcc11.sh
- name: Build & Install
run: |
export PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:${PATH}
export LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib64:/usr/local/cuda/lib64:${LD_LIBRARY_PATH}
which nvcc || echo "nvcc not in PATH!"
cd ExampleCodes
cmake -S . -B build \
-DCMAKE_VERBOSE_MAKEFILE=ON \
-DAMReX_PARTICLES=ON \
-DAMReX_LINEAR_SOLVERS=ON \
-DAMReX_FORTRAN=ON \
-DAMReX_FORTRAN_INTERFACES=ON \
-DAMReX_EB=ON \
-DAMReX_GPU_BACKEND=CUDA \
-DCMAKE_C_COMPILER=$(which gcc) \
-DCMAKE_CXX_COMPILER=$(which g++) \
-DCMAKE_CUDA_HOST_COMPILER=$(which g++) \
-DCMAKE_Fortran_COMPILER=$(which gfortran) \
-DCMAKE_CUDA_STANDARD=17 \
-DCMAKE_CXX_STANDARD=17 \
-DAMReX_CUDA_ARCH=8.0 \
-DAMReX_CUDA_ERROR_CROSS_EXECUTION_SPACE_CALL=ON \
-DAMReX_CUDA_ERROR_CAPTURE_THIS=ON
cmake --build build -j 2
tutorials-dpcpp:
name: DPCPP [email protected] C++17 [tutorials]
runs-on: ubuntu-20.04
env: {CXXFLAGS: "-fno-operator-names"}
steps:
- uses: actions/checkout@v4
- name: Dependencies
run: .github/workflows/dependencies/dependencies_dpcpp.sh
- name: Build & Install
run: |
set +e
source /opt/intel/oneapi/setvars.sh
set -e
cd ExampleCodes
cmake -S . -B build \
-DCMAKE_CXX_COMPILER_ID="Clang" \
-DCMAKE_CXX_COMPILER_VERSION=12.0 \
-DCMAKE_CXX_STANDARD_COMPUTED_DEFAULT="17" \
-DCMAKE_VERBOSE_MAKEFILE=ON \
-DAMReX_LINEAR_SOLVERS=ON \
-DAMReX_FORTRAN=ON \
-DAMReX_FORTRAN_INTERFACES=ON \
-DAMReX_EB=ON \
-DAMReX_PARTICLES=ON \
-DAMReX_GPU_BACKEND=SYCL \
-DCMAKE_C_COMPILER=$(which icx) \
-DCMAKE_CXX_COMPILER=$(which icpx) \
-DCMAKE_Fortran_COMPILER=$(which gfortran)
cmake --build build --parallel 2
# note: setting the CXX compiler ID is a work-around for
# the 2021.1 DPC++ release / CMake 3.19.0-3.19.1
# https://gitlab.kitware.com/cmake/cmake/-/issues/21551#note_869580
tutorials-hip:
name: HIP ROCm [email protected] C++17 [tutorials]
runs-on: ubuntu-20.04
# Have to have -Wno-deprecated-declarations due to deprecated atomicAddNoRet
# Have to have -Wno-gnu-zero-variadic-macro-arguments to avoid
# amrex/Src/Base/AMReX_GpuLaunchGlobal.H:15:5: error: must specify at least one argument for '...' parameter of variadic macro [-Werror,-Wgnu-zero-variadic-macro-arguments]
# __launch_bounds__(amrex_launch_bounds_max_threads)
# ^
# /opt/rocm-4.1.1/hip/include/hip/hcc_detail/hip_runtime.h:178:71: note: expanded from macro '__launch_bounds__'
# select_impl_(__VA_ARGS__, launch_bounds_impl1, launch_bounds_impl0)(__VA_ARGS__)
# ^
# /opt/rocm-4.1.1/hip/include/hip/hcc_detail/hip_runtime.h:176:9: note: macro 'select_impl_' defined here
# #define select_impl_(_1, _2, impl_, ...) impl_
env: {CXXFLAGS: "-Werror -Wall -Wextra -Wpedantic -Wnull-dereference -Wfloat-conversion -Wshadow -Woverloaded-virtual -Wextra-semi -Wunreachable-code -Wno-deprecated-declarations -Wno-gnu-zero-variadic-macro-arguments -Wno-pass-failed"}
steps:
- uses: actions/checkout@v4
- name: Dependencies
run: .github/workflows/dependencies/dependencies_hip.sh
- name: Build & Install
run: |
source /etc/profile.d/rocm.sh
hipcc --version
which clang
which clang++
cmake --version
# "mpic++ --showme" forgets open-pal in Ubuntu 20.04 + OpenMPI 4.0.3
# https://bugs.launchpad.net/ubuntu/+source/openmpi/+bug/1941786
# https://github.com/open-mpi/ompi/issues/9317
export LDFLAGS="-lopen-pal"
cd ExampleCodes
cmake -S . -B build_nofortran \
-DCMAKE_VERBOSE_MAKEFILE=ON \
-DAMReX_EB=ON \
-DAMReX_ENABLE_TESTS=ON \
-DAMReX_PARTICLES=ON \
-DAMReX_FORTRAN=OFF \
-DAMReX_LINEAR_SOLVERS=ON \
-DAMReX_GPU_BACKEND=HIP \
-DAMReX_AMD_ARCH=gfx908 \
-DCMAKE_C_COMPILER=$(which clang) \
-DCMAKE_CXX_COMPILER=$(which clang++) \
-DCMAKE_CXX_STANDARD=17
cmake --build build_nofortran -j 2