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Change vnl matrix type #302

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Change vnl matrix type #302

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c2f925f
ENH: Add automated AIF mask generation.
ntustison Jan 25, 2020
7f60fe0
BUG: Forgot to roxygenise.
ntustison Jan 25, 2020
362c7ac
BUG: Don't run example.
ntustison Jan 25, 2020
0f632d1
BUG: Remove example.
ntustison Jan 25, 2020
441cbf3
ENH: More edits.
ntustison Jan 25, 2020
5fc84b6
ENH: Need xgboost.
ntustison Jan 25, 2020
bf09627
ENH: More edits for testing.
ntustison Jan 25, 2020
b6cb1ba
ENH: More edits for testing 2.
ntustison Jan 26, 2020
4c0547b
ENH: Remove all plotting stuff.
ntustison Jan 26, 2020
0f350d0
COMP: Accommodate recent ITK changes.
ntustison Mar 13, 2020
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1 change: 1 addition & 0 deletions .travis.yml
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Expand Up @@ -85,6 +85,7 @@ before_install:
- Rscript -e 'install.packages("ggplot2")'
- Rscript -e 'install.packages("psych")'
- Rscript -e 'install.packages("randomForest")'
- Rscript -e 'install.packages("xgboost")'
- gh_binary_install stnava/ITKR ANTsX/ANTsRCore
# - gh_binary_install muschellij2/ITKR muschellij2/ANTsRCore
- export ants_user=ANTsX
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6 changes: 3 additions & 3 deletions DESCRIPTION
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Expand Up @@ -31,7 +31,8 @@ Imports:
grDevices,
magrittr,
stats,
utils
utils,
xgboost
Suggests:
magic,
psych,
Expand Down Expand Up @@ -81,7 +82,6 @@ Suggests:
viridis,
visreg,
wmtsa,
xgboost,
FNN,
nabor,
RANN
Expand All @@ -91,5 +91,5 @@ SystemRequirements: cmake, git, clang
Remotes: stnava/ITKR, ANTsX/ANTsRCore
NeedsCompilation: yes
VignetteBuilder: knitr
RoxygenNote: 6.1.1.9000
RoxygenNote: 7.0.2
Encoding: UTF-8
6 changes: 6 additions & 0 deletions NAMESPACE
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Expand Up @@ -45,6 +45,7 @@ export(fastMarchingExtension)
export(filterfMRIforNetworkAnalysis)
export(frequencyFilterfMRI)
export(fsl2antsrTransform)
export(generateAifMaskImage)
export(geoSeg)
export(getASLNoisePredictors)
export(getAverageOfTimeSeries)
Expand Down Expand Up @@ -238,12 +239,14 @@ importFrom(magrittr,"%>%")
importFrom(methods,new)
importFrom(stats,ar)
importFrom(stats,as.formula)
importFrom(stats,chisq.test)
importFrom(stats,coefficients)
importFrom(stats,convolve)
importFrom(stats,cor)
importFrom(stats,cor.test)
importFrom(stats,cov)
importFrom(stats,dist)
importFrom(stats,dnorm)
importFrom(stats,formula)
importFrom(stats,glm)
importFrom(stats,lm)
Expand All @@ -252,6 +255,7 @@ importFrom(stats,loess)
importFrom(stats,median)
importFrom(stats,model.matrix)
importFrom(stats,na.omit)
importFrom(stats,optim)
importFrom(stats,optimize)
importFrom(stats,p.adjust)
importFrom(stats,pchisq)
Expand Down Expand Up @@ -282,4 +286,6 @@ importFrom(utils,setTxtProgressBar)
importFrom(utils,tail)
importFrom(utils,txtProgressBar)
importFrom(utils,write.csv)
importFrom(xgboost,xgb.DMatrix)
importFrom(xgboost,xgb.train)
useDynLib(ANTsR)
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