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switch macos-12 runner to macos-13 #6

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switch macos-12 runner to macos-13

switch macos-12 runner to macos-13 #6

Workflow file for this run

.github/workflows/build-and-test-deploy.yml at e9e3e7f
name: build-and-test-deploy
on:
push:
tags:
- v*
jobs:
build-source-dist:
runs-on: ubuntu-latest
steps:
- name: Check out code
uses: actions/checkout@v4
- name: Setup Python
uses: actions/setup-python@v4
with:
python-version: 3.9
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install setuptools wheel build
- name: Build package
shell: bash
run: |
BASE_URL="https://raw.githubusercontent.com/WET-tool/glm-aed/main/binaries/"
mkdir -p glmpy/bin
python -m build --sdist
- name: Upload artifact
uses: actions/upload-artifact@v3
with:
name: source-dist
path: dist/
build-wheels-manylinux-aarch64:
name: Build wheels on manylinux for aarch64
runs-on: ubuntu-latest
steps:
- name: Check out code
uses: actions/checkout@v4
- name: Set up QEMU
uses: docker/setup-qemu-action@v1
with:
platforms: all
- name: Set up Docker buildx
uses: docker/setup-buildx-action@v1
- name: Compile GLM for aarch64
run: |
docker run --platform linux/arm64/v8 --rm -v $(pwd)/glm:/glm quay.io/pypa/manylinux2014_aarch64 /bin/bash -c "\
git clone --recursive https://github.com/WET-tool/glm-aed.git && \
yum update -y && \
yum install epel-release -y && \
yum install -y netcdf-devel gd gd-devel gcc-gfortran && \
cd glm-aed/glm-source && \
mkdir binaries && \
./build_glm.sh && \
cp /glm-aed/glm-source/binaries/glm_latest/glm /glm/ && \
cp /usr/lib64/{libgd.so.2,libjpeg.so.62,libnetcdf.so.7,libhdf5.so.8,libhdf5_hl.so.8,libsz.so.2,libaec.so.0,libXpm.so.4,libdl.so.2,libc.so.6,libm.so.6,libpng15.so.15} /glm/"
mkdir -p glmpy/bin
sudo mv glm/glm glmpy/bin/
sudo chmod +x glmpy/bin/*
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$(pwd)/glm
- name: Build wheels for aarch64
uses: pypa/[email protected]
env:
CIBW_BUILD: 'cp39-* cp310-* cp311-* cp312-* pp39-* pp310-*'
CIBW_ARCHS_LINUX: 'aarch64'
CIBW_MANYLINUX_AARCH64_IMAGE: quay.io/pypa/manylinux2014_aarch64
CIBW_ENVIRONMENT: "LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$(pwd)/glm"
- name: Upload aarch64 wheels artifact
uses: actions/upload-artifact@v3
with:
name: wheels-manylinux2014-aarch64
path: ./wheelhouse/*.whl
build-wheels-manylinux-x86_64:
name: Build wheels on manylinux for x86_64
runs-on: ubuntu-latest
steps:
- name: Check out code
uses: actions/checkout@v4
- name: Compile GLM for x86_64
run: |
docker run --rm -v $(pwd)/glm:/glm quay.io/pypa/manylinux2014_x86_64 /bin/bash -c "\
git clone --recursive https://github.com/WET-tool/glm-aed.git && \
yum install epel-release -y && \
yum update -y && \
yum install -y netcdf netcdf-devel gd gd-devel gcc-gfortran libjpeg-turbo hdf5 hdf5-devel libaec libaec-devel libXpm glibc libpng-1.5.13-8.el7.i686 && \
cd glm-aed/glm-source && \
mkdir binaries && \
./build_glm.sh
cp /glm-aed/glm-source/binaries/glm_latest/glm /glm/ && \
cp /usr/lib64/{libgd.so.2,libjpeg.so.62,libnetcdf.so.7,libhdf5.so.8,libhdf5_hl.so.8,libsz.so.2,libaec.so.0,libXpm.so.4,libdl.so.2,libc.so.6,libm.so.6,libpng15.so.15} /glm/"
mkdir -p glmpy/bin
sudo mv glm/glm glmpy/bin/
sudo chmod +x glmpy/bin/*
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$(pwd)/glm
- name: Build wheels for x86_64
uses: pypa/[email protected]
env:
CIBW_BUILD: 'cp39-* cp310-* cp311-* cp312-* pp39-* pp310-*'
CIBW_ARCHS_LINUX: 'x86_64'
CIBW_MANYLINUX_X86_64_IMAGE: quay.io/pypa/manylinux2014_x86_64
CIBW_ENVIRONMENT: "LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$(pwd)/glm"
- name: Upload x86_64 wheels artifact
uses: actions/upload-artifact@v3
with:
name: wheels-manylinux2014-x86_64
path: ./wheelhouse/*.whl
build-wheels-macos-x86_64:
name: Build wheels on MacOS for x86_64
runs-on: macos-13
steps:
- name: Check out code
uses: actions/checkout@v4
- name: Install packages and setup
run: |
brew reinstall gcc
brew install netcdf
brew install gd
git clone --recursive https://github.com/WET-tool/glm-aed.git
- name: Compile GLM for x86_64
run: |
cd $GITHUB_WORKSPACE/glm-aed/glm-source
./build_glm.sh
MOSDIR=`grep 'SOFTWARE LICENSE AGREEMENT FOR ' '/System/Library/CoreServices/Setup Assistant.app/Contents/Resources/en.lproj/OSXSoftwareLicense.rtf' | awk -F 'macOS ' '{print $NF}' | tr -d '\\' | tr ' ' '_'`
cd $GITHUB_WORKSPACE
mkdir $GITHUB_WORKSPACE/glmpy/bin/
cp $GITHUB_WORKSPACE/glm-aed/glm-source/binaries/macos/${MOSDIR}/glm_latest/glm $GITHUB_WORKSPACE/glmpy/bin/
- name: Build wheels for x86_64
uses: pypa/[email protected]
env:
CIBW_BUILD: 'cp39-* cp310-* cp311-* cp312-* pp39-* pp310-*'
CIBW_ARCHS_MACOS: 'x86_64'
- name: Upload x86_64 wheels artifact
uses: actions/upload-artifact@v3
with:
name: wheels-macos-x86_64
path: ./wheelhouse/*.whl
build-wheels-macos-ARM64:
name: Build wheels on MacOS for ARM64
runs-on: macos-14
steps:
- name: Check out code
uses: actions/checkout@v4
- name: Install packages and setup
run: |
brew reinstall gcc
brew install netcdf
brew install gd
brew install pipx
pipx ensurepath
git clone --recursive https://github.com/WET-tool/glm-aed.git
- name: Compile GLM for ARM64
env:
CPATH: /opt/homebrew/include:$CPATH
LIBRARY_PATH: /opt/homebrew/lib:$LIBRARY_PATH
run: |
cd $GITHUB_WORKSPACE/glm-aed/glm-source
./build_glm.sh
MOSDIR=`grep 'SOFTWARE LICENSE AGREEMENT FOR ' '/System/Library/CoreServices/Setup Assistant.app/Contents/Resources/en.lproj/OSXSoftwareLicense.rtf' | awk -F 'macOS ' '{print $NF}' | tr -d '\\' | tr ' ' '_'`
cd $GITHUB_WORKSPACE
mkdir $GITHUB_WORKSPACE/glmpy/bin/
cp $GITHUB_WORKSPACE/glm-aed/glm-source/binaries/macos/${MOSDIR}/glm_latest/glm $GITHUB_WORKSPACE/glmpy/bin/
- name: Build wheels for ARM64
uses: pypa/[email protected]
env:
CIBW_BUILD: 'cp39-* cp310-* cp311-* cp312-* pp39-* pp310-*'
CIBW_ARCHS_MACOS: 'arm64'
- name: Upload ARM64 wheels artifact
uses: actions/upload-artifact@v3
with:
name: wheels-macos-arm64
path: ./wheelhouse/*.whl
build-wheel-windows-amd64:
name: Build wheels on Windows for AMD64
runs-on: windows-2022
steps:
- name: Check out code
uses: actions/checkout@v4
- name: Install packages and setup
run: |
choco install make
choco install mingw
choco install git
choco install cmake --installargs 'ADD_CMAKE_TO_PATH=System'
git clone --recursive https://github.com/WET-tool/glm-aed.git
- name: Compile GLM for AMD64
shell: bash
run: |
cd $GITHUB_WORKSPACE/glm-aed/glm-source/ancillary/windows/Sources
./build_all.sh
cd $GITHUB_WORKSPACE/glm-aed/glm-source
./build_glm.sh
cd $GITHUB_WORKSPACE
mkdir -p $GITHUB_WORKSPACE/glmpy/bin/
cp "$GITHUB_WORKSPACE/glm-aed/glm-source/binaries/windows/glm_latest/glm.exe" "$GITHUB_WORKSPACE/glmpy/bin/"
cp "$GITHUB_WORKSPACE/glm-aed/glm-source/ancillary/windows/msys/bin/"*.dll "$GITHUB_WORKSPACE/glmpy/bin/"
- name: Build wheels for AMD64
uses: pypa/[email protected]
env:
CIBW_BUILD: 'cp39-* cp310-* cp311-* cp312-* pp39-* pp310-*'
CIBW_ARCHS_WINDOWS: "auto64"
- name: Upload wheels artifact
uses: actions/upload-artifact@v3
with:
name: wheels-windows-amd64
path: ./wheelhouse/*.whl
publish-to-testpypi:
name: Publish distributions to TestPyPI
needs: [build-source-dist, build-wheels-manylinux-aarch64, build-wheels-manylinux-x86_64, build-wheels-macos-x86_64, build-wheels-macos-ARM64, build-wheel-windows-amd64]
runs-on: ubuntu-latest
strategy:
matrix:
distribution:
- source-dist
- wheels-manylinux2014-aarch64
- wheels-manylinux2014-x86_64
- wheels-macos-x86_64
- wheels-macos-arm64
- wheels-windows-amd64
environment:
name: testpypi
url: https://test.pypi.org/p/glm-py
permissions:
id-token: write
steps:
- name: Download distribution artifact
uses: actions/download-artifact@v3
with:
name: ${{ matrix.distribution}}
path: dist/
- name: Random sleep to avoid PyPI 503
run: |
RANDOM_SLEEP=$(( RANDOM % 60 + 1 ))
sleep $RANDOM_SLEEP
- name: Publish distribution to TestPyPI
uses: pypa/gh-action-pypi-publish@release/v1
with:
repository-url: https://test.pypi.org/legacy/
wait-for-testpypi-to-update:
name: Wait for TestPyPI to update
needs: publish-to-testpypi
runs-on: ubuntu-latest
steps:
- name: Sleep for 30 seconds
run: sleep 30s
shell: bash
test-linux-wheels-x86_64:
name: Test Linux wheels x86_64
needs: wait-for-testpypi-to-update
strategy:
matrix:
python-version: ["3.9", "3.10", "3.11", "3.12"]
runs-on: ubuntu-latest
steps:
- name: Setup Python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Download files to run
run: |
curl https://raw.githubusercontent.com/WET-tool/glm-py/main/notebooks/glmpy-demo/run_glmpy.py --output run_glmpy.py
curl https://raw.githubusercontent.com/WET-tool/glm-py/main/notebooks/glmpy-demo/glm3.nml --output glm3.nml
mkdir bcs
curl https://raw.githubusercontent.com/WET-tool/glm-py/main/notebooks/glmpy-demo/bcs/nldas_driver.csv --output bcs/nldas_driver.csv
- name: Install glmpy
run: |
pip install fastapi==0.88.0
pip install --index-url https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple glm-py --use-deprecated=legacy-resolver
- name: Run glmpy
run: python run_glmpy.py
test-macos-wheels-x86_64:
name: Test MacOS wheels x86_64
needs: wait-for-testpypi-to-update
strategy:
matrix:
python-version: ["3.9", "3.10", "3.11", "3.12"]
runs-on: macos-12
steps:
- name: Setup Python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Download files to run
run: |
curl https://raw.githubusercontent.com/WET-tool/glm-py/main/notebooks/glmpy-demo/run_glmpy.py --output run_glmpy.py
curl https://raw.githubusercontent.com/WET-tool/glm-py/main/notebooks/glmpy-demo/glm3.nml --output glm3.nml
mkdir bcs
curl https://raw.githubusercontent.com/WET-tool/glm-py/main/notebooks/glmpy-demo/bcs/nldas_driver.csv --output bcs/nldas_driver.csv
- name: Install glmpy
run: |
pip install fastapi==0.88.0
pip install --index-url https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple glm-py --use-deprecated=legacy-resolver
- name: Run glmpy
run: python run_glmpy.py
test-macos-wheels-arm64:
name: Test MacOS wheels ARM64
needs: wait-for-testpypi-to-update
strategy:
matrix:
python-version: ["3.12"]
runs-on: macos-14
steps:
- name: Setup Python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Download files to run
run: |
curl https://raw.githubusercontent.com/WET-tool/glm-py/main/notebooks/glmpy-demo/run_glmpy.py --output run_glmpy.py
curl https://raw.githubusercontent.com/WET-tool/glm-py/main/notebooks/glmpy-demo/glm3.nml --output glm3.nml
mkdir bcs
curl https://raw.githubusercontent.com/WET-tool/glm-py/main/notebooks/glmpy-demo/bcs/nldas_driver.csv --output bcs/nldas_driver.csv
- name: Install glmpy
run: |
pip install fastapi==0.88.0
pip install --index-url https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple glm-py --use-deprecated=legacy-resolver
- name: Run glmpy
run: python run_glmpy.py
test-windows-wheels-amd64:
name: Test Windows wheels AMD64
needs: wait-for-testpypi-to-update
strategy:
matrix:
python-version: ["3.9", "3.10", "3.11", "3.12"]
runs-on: windows-2022
steps:
- name: Setup Python
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version}}
- name: Download files to run
run: |
Invoke-WebRequest -Uri https://raw.githubusercontent.com/WET-tool/glm-py/main/notebooks/glmpy-demo/run_glmpy.py -OutFile run_glmpy.py
Invoke-WebRequest -Uri https://raw.githubusercontent.com/WET-tool/glm-py/main/notebooks/glmpy-demo/glm3.nml -OutFile glm3.nml
New-Item -ItemType Directory -Force -Path bcs
Invoke-WebRequest -Uri https://raw.githubusercontent.com/WET-tool/glm-py/main/notebooks/glmpy-demo/bcs/nldas_driver.csv -OutFile bcs/nldas_driver.csv
- name: Install glmpy
run: |
pip install fastapi==0.88.0
pip install --index-url https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple glm-py --use-deprecated=legacy-resolver
- name: Run glmpy
run: python run_glmpy.py
publish-to-pypi:
name: Publish distributions to PyPI
needs: [test-windows-wheels-amd64, test-macos-wheels-arm64, test-macos-wheels-x86_64, test-linux-wheels-x86_64]
runs-on: ubuntu-latest
strategy:
matrix:
distribution:
- source-dist
- wheels-manylinux2014-aarch64
- wheels-manylinux2014-x86_64
- wheels-macos-x86_64
- wheels-macos-arm64
- wheels-windows-amd64
environment:
name: pypi
url: https://pypi.org/p/glm-py
permissions:
id-token: write
steps:
- name: Download distribution artifact
uses: actions/download-artifact@v3
with:
name: ${{ matrix.distribution }}
path: dist/
- name: Random sleep to avoid PyPI 503
run: |
RANDOM_SLEEP=$(( RANDOM % 60 + 1 ))
sleep $RANDOM_SLEEP
- name: Publish distribution to PyPI
uses: pypa/gh-action-pypi-publish@release/v1